LOCUS BC000152 1717 bp mRNA linear HUM 20-SEP-2004
DEFINITION Homo sapiens chromosome 1 open reading frame 43, mRNA (cDNA clone
MGC:5332 IMAGE:2901006), complete cds.
ACCESSION BC000152
VERSION BC000152.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1717)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1717)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Feb 23, 2001 this sequence version replaced BC000152.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: m Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14149687.
FEATURES Location/Qualifiers
source 1..1717
/db_xref="H-InvDB:HIT000029388"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5332 IMAGE:2901006"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1717
/gene="C1orf43"
/gene_synonym="DKFZp586G1722"
/gene_synonym="HSPC012"
/gene_synonym="NICE-3"
/db_xref="GeneID:25912"
CDS 200..961
/gene="C1orf43"
/gene_synonym="DKFZp586G1722"
/gene_synonym="HSPC012"
/gene_synonym="NICE-3"
/codon_start=1
/product="C1orf43 protein"
/protein_id="AAH00152.1"
/db_xref="GeneID:25912"
/translation="MASGSNWLSGVNVVLVMAYGSLVFVLLFIFVKRQIMRFAMKSRR
GPHVPVGHNAPKDLKEEIDIRLSRVQDIKYEPQLLADDDARLLQLETQGNQSCYNYLY
RMKALDAIRTSEIPFHSEGRHPRSLMGKNFRSYLLDLRNTSTPFKGVRKALIDTLLDG
YETARYGTGVFGQNEYLRYQEALSELATAVKARIGSSQRHHQSAAKDLTQSPEVSPTT
IQVTYLPSSQKSKRAKHFLELKSFKDNYNTLESTL"
BASE COUNT 445 a 405 c 418 g 449 t
ORIGIN
1 gctggaaggc gtcgttctcc tttcccagct ctcctgcctg tccgccatgt tttcaggccg
61 ggtctggctt ggtcttcccc cgtaaggaaa tggccgggga gctccagggg acccaggcgc
121 cgtcgcttcg gcggagcctg ggctgaccag ccaggacagc ggggtaaacc cgaacaattc
181 tgcgcgaggt agggaggcca tggcgtccgg cagtaactgg ctctccgggg tgaatgtcgt
241 gctggtgatg gcctacggga gcctggtgtt tgtactgcta tttatttttg tgaagaggca
301 aatcatgcgc tttgcaatga aatctcgaag gggacctcat gtccctgtgg gacacaatgc
361 ccccaaggac ttgaaagagg agattgatat tcgactctcc agggttcagg atatcaagta
421 tgagccccag ctccttgcag atgatgatgc tagactacta caactggaaa cccagggaaa
481 tcaaagttgc tacaactatc tgtataggat gaaagctctg gatgccattc gtacctctga
541 gatcccattt cattctgaag gccggcatcc ccgttcctta atgggcaaga atttccgctc
601 ctacctgctg gatctgcgaa acactagtac gcctttcaag ggtgtacgca aagcactcat
661 tgataccctt ttggatggct atgaaacagc ccgctatggg acaggggtct ttggccagaa
721 tgagtaccta cgctatcagg aggccctgag tgagctggcc actgcggtta aagcacgaat
781 tgggagctct cagcgacatc accagtcagc agccaaagac ctaactcagt cccctgaggt
841 ctccccaaca accatccagg tgacatacct cccctccagt cagaagagta aacgtgccaa
901 gcacttcctt gaattgaaga gctttaagga taactataac acattggaga gtactctgtg
961 acggagctga aggactcttg ccgtagatta agccagtcag ttgcaatgtg caagacaggc
1021 tgcttgccgg gccgccctcg gaacatctgg cccagcaggc ccagactgta tccatccaag
1081 ttcccgttgt atccagagtt cttagagctt gtgtctaaag ggtaattccc caacccttcc
1141 ttatgagcat ttttagaaca ttggctaaga ctattttccc ccagtagcgc ttttttctgg
1201 atttgcattc gggtgttatt cttaatgttt ctgtcaaagc ttcttaaaaa tcttcacttg
1261 gtttcagcca tagttcacct tccctgttcc aggtttattt aattccaaag gtgagagttg
1321 gagtgagatg tcttccatat ctataccttt gtgcacagtt gaatgggaac tgtttgggtt
1381 tagggcatct tagagttgat tgatggaaaa agcagacagg aactggtggg aggtcaagtg
1441 gggaagttgg tgaatgtgga ataacttacc tttgtgctcc acttaaacca gatgtgttgc
1501 agctttcctg acatgcaagg atctacttta attccacact ctcattaata aattgaataa
1561 aagggaatgt tttggcacct gatataatct gccaggctat gtgacagtag gaaggaatgg
1621 tttcccctaa caagcccaat gcactggtct gactttataa attatttaat aaaatgaact
1681 attatcaaat aaaaaccaaa aaaaaaaaaa aaaaaaa
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