LOCUS BC000148 2282 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens synaptosomal-associated protein, 23kDa, mRNA (cDNA
clone MGC:5325 IMAGE:2900640), complete cds.
ACCESSION BC000148
VERSION BC000148.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2282)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2282)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Feb 14, 2001 this sequence version replaced BC000148.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: o Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18765728.
FEATURES Location/Qualifiers
source 1..2282
/db_xref="H-InvDB:HIT000029384"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5325 IMAGE:2900640"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2282
/gene="SNAP23"
/gene_synonym="HsT17016"
/gene_synonym="SNAP23A"
/gene_synonym="SNAP23B"
/db_xref="GeneID:8773"
/db_xref="HGNC:HGNC:11131"
/db_xref="MIM:602534"
CDS 55..690
/gene="SNAP23"
/gene_synonym="HsT17016"
/gene_synonym="SNAP23A"
/gene_synonym="SNAP23B"
/codon_start=1
/product="synaptosomal-associated protein, 23kDa"
/protein_id="AAH00148.1"
/db_xref="GeneID:8773"
/db_xref="HGNC:HGNC:11131"
/db_xref="MIM:602534"
/translation="MDNLSSEEIQQRAHQITDESLESTRRILGLAIESQDAGIKTITM
LDEQKEQLNRIEEGLDQINKDMRETEKTLTELNKCCGLCVCPCNRTKNFESGKAYKTT
WGDGGENSPCNVVSKQPGPVTNGQLQQPTTGAASGGYIKRITNDAREDEMEENLTQVG
SILGNLKDMALNIGNEIDAQNPQIKRITDKADTNRDRIDIANARAKKLIDS"
BASE COUNT 678 a 431 c 466 g 707 t
ORIGIN
1 gtccgagttg ccgccggaga ggagtggcct cgcccgcttg agttttgatt catcatggat
61 aatctgtcat cagaagaaat tcaacagaga gctcaccaga ttactgatga gtctctggaa
121 agtacgagga gaatcctggg tttagccatt gagtctcagg atgcaggaat caagaccatc
181 actatgctgg atgaacaaaa ggaacaacta aaccgcatag aagaaggctt ggaccaaata
241 aataaggaca tgagagagac agagaagact ttaacagaac tcaacaaatg ctgtggcctt
301 tgtgtctgcc catgtaatag aacaaagaac tttgagtctg gcaaggctta taagacaaca
361 tggggagatg gtggagaaaa ctcaccttgc aatgtagtat ctaaacagcc aggcccggtg
421 acaaatggtc agcttcagca accaacaaca ggagcagcca gtggtggata cattaaacgc
481 ataactaatg atgccagaga agatgaaatg gaagagaacc tgactcaagt gggcagtatc
541 ctgggaaatc taaaagacat ggccctgaac ataggcaatg agattgatgc tcaaaatcca
601 caaataaaac gaatcacaga caaggctgac accaacagag atcgtattga tattgccaat
661 gccagagcaa agaaactcat tgacagctaa agctactgct gttcttcttt atcatttatt
721 cacttccgta gctcctcctt gaaagttatt accttttcag agtttaagtt ttcggttcca
781 cgctcttcta attgggagat aatatggaag aagggccaga gcagttacag ccctccttct
841 tttttgtttt ctgttgaggg ccgactgctg ctctgccttc cttctagtat tttctttctc
901 aattcatacg cttagattgg ttttcatatg tcatgtttag tgttttcatc ctcctcatat
961 acttcagcag gttcttttgc tttcaagatt tggaagcatt gccaaagaca gccatgaaga
1021 aggaagctgt agaggtgttt tttgttgttg tttatttttg cttttgtggt tgagggaagg
1081 acaagagata agaggttgtt acctcagtaa aaaccttcag gccacaaagc aaaaagttgc
1141 atagccacaa cgaagatcta gttggatata gtttttgatt taagttgcag ttatagccaa
1201 tttaggctaa tgcttggttt tggagctttt atacacaacg tttttgttag gcatcacagt
1261 tttgcaacct ctgctccaaa gagaaaaata gaatgagttt tctttctttt tttttttttg
1321 gagtcagagt ctcgctctct tgtccaggct ggagtgcaat agcgcgatct gggctcactg
1381 caacctccgc ctccctggtt caagcaattc tcctgccttg cctcctgagt agctgggatt
1441 acaggcgtgt gtcaccacgc tcggctaatt tttgtatttt tagtagaggc agggtttcac
1501 catgtcaagc tggtcttgga ctcctgacgt cgtgatccac ccgccttggc ctcccaaagt
1561 actgggatta caggcgtgag ccactgtgcc cggccgtttt cttaaagtga gcttaatttc
1621 tgaactctta gtgattcata tatgtacata aatctgtgat cccatttctt attgcaccat
1681 tcaggaacac tttatataaa tgagtggctt tttatttcat attattagta gtatcatggt
1741 tccattacag gcctattaac atcatacatt gtcattagtc tttgaagaaa aaatatgtaa
1801 atatatatgt gtaacatgag aatttctctc taaagcaggg cttaaaattt tttggaaaag
1861 tttgacaaag cataccacat gaattcagat ttacctcaat gctaagaatt atgtttagtt
1921 aggaaaaagg aaagtcattt tgacctcagg tagaaaaata gattgctttg agttttatgt
1981 agctttagac tttaaaaagt tagaatttat tctgtaacta aaaattattt gaaaaaatta
2041 tgcctctggt ttaattattg gtgattacac actctttctc ttacccttgt gtattgaact
2101 atgtccataa tcaagttgat gtggatcctg aaaagtgtta tgaacatctg attggtattt
2161 gtcacattta ttttaaaatt agcatctgaa cacttcaaag ctgtcagtgt gtattggttt
2221 caccaataac cactgcttga tccttacaat taaatttttt aactaacaaa aaaaaaaaaa
2281 aa
//