LOCUS BC000117 1676 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens GDP-mannose 4,6-dehydratase, mRNA (cDNA clone MGC:1739 IMAGE:3351070), complete cds. ACCESSION BC000117 VERSION BC000117.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1676) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1676) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: k Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41584204. FEATURES Location/Qualifiers source 1..1676 /db_xref="H-InvDB:HIT000029358" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1739 IMAGE:3351070" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1676 /gene="GMDS" /gene_synonym="GMD" /db_xref="GeneID:2762" /db_xref="HGNC:HGNC:4369" /db_xref="MIM:602884" CDS 178..1296 /gene="GMDS" /gene_synonym="GMD" /codon_start=1 /product="GDP-mannose 4,6-dehydratase" /protein_id="AAH00117.1" /db_xref="GeneID:2762" /db_xref="HGNC:HGNC:4369" /db_xref="MIM:602884" /translation="MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLL EKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYG KVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANF VTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATG EVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQG DCTKAKQKLNWKPRVAFDELVREMVHADVELMRTNPNA" BASE COUNT 393 a 446 c 466 g 371 t ORIGIN 1 gcacggcctc ccgtgcgccc ctgtcagact gtggcggccg gtcgcgcggt gcgctctccc 61 tccctgcccg cagcctggag aggcgcttcg tgctgcacac ccccgcgttc ctgccggcac 121 cgcgcctgcc ctctgccgcg ctccgccctg ccgccgaccg cacgcccgcc gcgggacatg 181 gcacacgcac cggcacgctg ccccagcgcc cggggctccg gggacggcga gatgggcaag 241 cccaggaacg tggcgctcat caccggtatc acaggccagg atggttccta cctggctgag 301 ttcctgctgg agaaaggcta tgaggtccat ggaattgtac ggcggtccag ttcatttaat 361 acgggtcgaa ttgagcatct gtataagaat ccccaggctc acattgaagg aaacatgaag 421 ttgcactatg gcgatctcac tgacagtacc tgccttgtga agatcattaa tgaagtaaag 481 cccacagaga tctacaacct tggagcccag agccacgtca aaatttcctt tgacctcgct 541 gagtacactg cggacgttga cggagttggc actctacgac ttctagatgc agttaagact 601 tgtggcctta tcaactctgt gaagttctac caagcctcaa caagtgaact ttatgggaaa 661 gtgcaggaaa taccccagaa ggagaccacc cctttctatc cccggtcacc ctatggggca 721 gcaaaactct atgcctattg gattgtggtg aacttccgtg aggcgtataa tctctttgca 781 gtgaacggca ttctcttcaa tcatgagagt cccagaagag gagctaattt cgttactcga 841 aaaattagcc ggtcagtagc taagatttac cttggacaac tggaatgttt cagtttggga 901 aatctggatg ccaaacgaga ttggggccat gccaaggact atgtggaggc tatgtggttg 961 atgttgcaga atgacgagcc ggaggacttc gttatagcta ctggggaggt ccatagtgtc 1021 cgggaatttg tcgagaaatc attcttgcac attggaaaaa ccattgtgtg ggaaggaaag 1081 aatgaaaatg aagtgggcag atgtaaagag accggcaaag ttcacgtgac tgtggatctc 1141 aagtactacc ggccaactga agtggacttt ctgcagggcg actgcaccaa agcgaaacag 1201 aagctgaact ggaagccccg ggtcgctttc gatgagctgg tgagggagat ggtgcacgcc 1261 gacgtggagc tcatgaggac aaaccccaat gcctgagcag cgcctcggag cccggcccgc 1321 cctccggcta caatccccgc agagtctccg gtgcagacgc gctgcgggga tggggagcgg 1381 cgtgccaatc tgcgggtccc ctgcggcccc tgctgccgct gcgctgtccc ggccgcaaga 1441 gcggggccgc cccgccgagg tttgtagcag ccgggatgtg accctccagg gtttgggtcg 1501 ctttgcgttt gtcgaagcct cctctgaatg gctttgtgaa atcaagatgt tttaatcaca 1561 ttcactttac ttgaaattat gttgttacac aacaaattgt ggggccttca aattgttttt 1621 ctcttttcat attaaaaatg gtctttctgt gaactagcaa aaaaaaaaaa aaaaaa //