LOCUS BC000102 2274 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens collagen, type IV, alpha 3 (Goodpasture antigen)
binding protein, mRNA (cDNA clone MGC:1410 IMAGE:3505746), complete
cds.
ACCESSION BC000102
VERSION BC000102.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2274)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2274)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000102.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: p Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5031716.
FEATURES Location/Qualifiers
source 1..2274
/db_xref="H-InvDB:HIT000029346"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1410 IMAGE:3505746"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2274
/gene="COL4A3BP"
/gene_synonym="CERT"
/gene_synonym="CERTL"
/gene_synonym="GPBP"
/gene_synonym="STARD11"
/db_xref="GeneID:10087"
/db_xref="HGNC:HGNC:2205"
/db_xref="MIM:604677"
CDS 407..2203
/gene="COL4A3BP"
/gene_synonym="CERT"
/gene_synonym="CERTL"
/gene_synonym="GPBP"
/gene_synonym="STARD11"
/codon_start=1
/product="COL4A3BP protein"
/protein_id="AAH00102.1"
/db_xref="GeneID:10087"
/db_xref="HGNC:HGNC:2205"
/db_xref="MIM:604677"
/translation="MSDNQSWNSSGSEEDPETESGPPVERCGVLSKWTNYIHGWQDRW
VVLKNNALSYYKSEDETEYGCRGSICLSKAVITPHDFDECRFDISVNDSVWYLRAQDP
DHRQQWIDAIEQHKTESGYGSESSLRRHGSMVSLVSGASGYSATSTSSFKKGHSLREK
LAEMETFRDILCRQVDTLQKYFDACADAVSKDELQRDKVVEDDEDDFPTTRSDGDFLH
STNGNKEKLFPHVTPKGINGIDFKGEAITFKATTAGILATLSHCIELMVKREDSWQKR
LDKETEKKRRTEEAYKNAMTELKKKSHFGGPDYEEGPNSLINEEEFFDAVEAALDRQD
KIEEQSQSEKVRLHWPTSLPSGDAFSSVGTHRFVQKVEEMVQNHMTYSLQDVGGDANW
QLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDVRNDWETTIE
NFHVVETLADNAIIIYQTHKRVWPASQRDVLYLSVIRKIPALTENDPETWIVCNFSVD
HDSAPLNNRCVRAKINVAMICQTLVSPPEGNQEISRDNILCKITYVANVNPGGWAPAS
VLRAVAKREYPKFLKRFTSYVQEKTAGKPILF"
BASE COUNT 659 a 470 c 589 g 556 t
ORIGIN
1 aggaagatgg cggcggtagc ggaggtgtga gtggacgcgg gactcagcgg ccggattttc
61 tcttcccttc ttttcccttt tccttcccta tttgaaattg gcatcgaggg ggctaagttc
121 gggtggcagc gccgggcgca acgcaggggt cacggcgacg gcggcggcgg ctgacggctg
181 gaagggtagg cttccttcac cgctcgtcct ccttcctcgc tccgctcggt gtcaggcgcg
241 gcggcggcgc ggcgggcgga cttcgtccct cctcctgctc ccccccacac cggagcgggc
301 actcttcgct tcgccatccc ccgacccttc accccgagga ctgggcgcct cctccggcgc
361 agctgaggga gcgggggccg gtctcctgct cggttgtcga gcctccatgt cggataatca
421 gagctggaac tcgtcgggct cggaggagga tccagagacg gagtctgggc cgcctgtgga
481 gcgctgcggg gtcctcagta agtggacaaa ctacattcat gggtggcagg atcgttgggt
541 agttttgaaa aataatgctc tgagttacta caaatctgaa gatgaaacag agtatggctg
601 cagaggatcc atctgtctta gcaaggctgt catcacacct cacgattttg atgaatgtcg
661 atttgatatt agtgtaaatg atagtgtttg gtatcttcgt gctcaggatc cagatcatag
721 acagcaatgg atagatgcca ttgaacagca caagactgaa tctggatatg gatctgaatc
781 cagcttgcgt cgacatggct caatggtgtc cctggtgtct ggagcaagtg gctactctgc
841 aacatccacc tcttcattca agaaaggcca cagtttacgt gagaagttgg ctgaaatgga
901 aacatttaga gacatcttat gtagacaagt tgacacgcta cagaagtact ttgatgcctg
961 tgctgatgct gtctctaagg atgaacttca aagggataaa gtggtagaag atgatgaaga
1021 tgactttcct acaacgcgtt ctgatggtga cttcttgcat agtaccaacg gcaataaaga
1081 aaagttattt ccacatgtga caccaaaagg aattaatggt atagacttta aaggggaagc
1141 gataactttt aaagcaacta ctgctggaat ccttgcaaca ctttctcatt gtattgaact
1201 aatggttaaa cgtgaggaca gctggcagaa gagactggat aaggaaactg agaagaaaag
1261 aagaacagag gaagcatata aaaatgcaat gacagaactt aagaaaaaat cccactttgg
1321 aggaccagat tatgaagaag gccctaacag tctgattaat gaagaagagt tctttgatgc
1381 tgttgaagct gctcttgaca gacaagataa aatagaagaa cagtcacaga gtgaaaaggt
1441 gagattacat tggcctacat ccttgccctc tggagatgcc ttttcttctg tggggacaca
1501 tagatttgtc caaaaggttg aagagatggt gcagaaccac atgacttact cattacagga
1561 tgtaggcgga gatgccaatt ggcagttggt tgtagaagaa ggagaaatga aggtatacag
1621 aagagaagta gaagaaaatg ggattgttct ggatccttta aaagctaccc atgcagttaa
1681 aggcgtcaca ggacatgaag tctgcaatta tttctggaat gttgacgttc gcaatgactg
1741 ggaaacaact atagaaaact ttcatgtggt ggaaacatta gctgataatg caatcatcat
1801 ttatcaaaca cacaagaggg tgtggcctgc ttctcagcga gacgtattat atctttctgt
1861 cattcgaaag ataccagcct tgactgaaaa tgaccctgaa acttggatag tttgtaattt
1921 ttctgtggat catgacagtg ctcctctaaa caaccgatgt gtccgtgcca aaataaatgt
1981 tgctatgatt tgtcaaacct tggtaagccc accagaggga aaccaggaaa ttagcaggga
2041 caacattcta tgcaagatta catatgtagc taatgtgaac cctggaggat gggcaccagc
2101 ctcagtgtta agggcagtgg caaagcgaga gtatcctaaa tttctaaaac gttttacttc
2161 ttacgtccaa gaaaaaactg caggaaagcc tattttgttc tagtattaac agtgactgaa
2221 gcaaggctgt gtgacattcc atgttgaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//