LOCUS BC000095 1865 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens N-acetylgalactosaminidase, alpha-, mRNA (cDNA clone
MGC:2280 IMAGE:3504221), complete cds.
ACCESSION BC000095
VERSION BC000095.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1865)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1865)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000095.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: o Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557780.
FEATURES Location/Qualifiers
source 1..1865
/db_xref="H-InvDB:HIT000029341"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2280 IMAGE:3504221"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1865
/gene="NAGA"
/gene_synonym="D22S674"
/gene_synonym="GALB"
/db_xref="GeneID:4668"
/db_xref="HGNC:HGNC:7631"
/db_xref="MIM:104170"
CDS 82..1317
/gene="NAGA"
/gene_synonym="D22S674"
/gene_synonym="GALB"
/codon_start=1
/product="N-acetylgalactosaminidase, alpha-"
/protein_id="AAH00095.1"
/db_xref="GeneID:4668"
/db_xref="HGNC:HGNC:7631"
/db_xref="MIM:104170"
/translation="MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDE
DPKNCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGI
PFLADYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFS
TPEERAQGYPKMAAALNATGRPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDI
QDSWWSVLSILNWFVEHQDILQPVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVL
AAPLLMSTDLRTISAQNMDILQNPLMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNK
ASALVFFSCRTDMPYRYHSSLGQLNFTGSVIYEAQDVYSGDIISGLRDETNFTVIINP
SGVVMWYLYPIKNLEMSQQ"
BASE COUNT 434 a 543 c 485 g 403 t
ORIGIN
1 cttcgcttcc agagcccaac acatacagct gatacacgca gaccagatct ggtcaggtcc
61 tcggaagctg agtccagagc gatgctgctg aagacagtgc tcttgctggg acatgtggcc
121 caggtgctga tgctggacaa tgggctcctg cagacaccac ccatgggctg gctggcctgg
181 gaacgcttcc gctgcaacat taactgtgat gaggacccaa agaactgcat aagtgaacag
241 ctcttcatgg agatggctga ccggatggca caggatggat ggcgggacat gggctacaca
301 tacctcaaca ttgatgactg ctggatcggt ggtcgcgatg ccagtggccg cctgatgcca
361 gatcccaagc gcttccctca tggcattcct ttcctggctg actacgttca ctccctgggc
421 ctgaagttgg gtatctacgc ggacatgggc aacttcacct gcatgggtta cccaggcacc
481 acactggaca aggtggtcca ggatgctcag accttcgccg agtggaaggt agacatgctc
541 aagctggatg gctgcttctc cacccccgag gagcgggccc aggggtaccc caagatggct
601 gctgccctga atgccacagg ccgccccatc gccttctcct gcagctggcc agcctatgaa
661 ggcggcctcc ccccaagggt gaactacagt ctgctggcgg acatctgcaa cctctggcgt
721 aactatgatg acatccagga ctcctggtgg agcgtgctct ccatcctgaa ttggttcgtg
781 gagcaccagg acatactgca gccagtggcc ggccctgggc actggaatga ccctgacatg
841 ctgctcattg ggaactttgg tctcagctta gagcaatccc gggcccagat ggccctgtgg
901 acggtgctgg cagcccccct cttgatgtcc acagacctgc gtaccatctc cgcccagaac
961 atggacattc tgcagaatcc actcatgatc aaaatcaacc aggatccctt aggcatccag
1021 ggacgcagga ttcacaagga aaaatctctc atcgaagtgt acatgcggcc tctgtccaac
1081 aaggctagcg ccttagtctt cttcagctgc aggaccgata tgccttatcg ctaccactcc
1141 tcccttggcc agctgaactt caccgggtct gtgatatatg aggcccagga cgtctactca
1201 ggtgacatca tcagtggcct ccgagatgaa accaacttca cagtgatcat caacccttca
1261 ggggtagtga tgtggtacct gtatcccatc aagaacctgg agatgtccca gcagtgagga
1321 gctgggacat gtgacaggct gtggtggcac cactgagcct agaccatgga gccttggcat
1381 gcccagggca agtggggagg ttctctgctc cccaggcctg ctcggtgact gaccccatca
1441 tacccaaagt gcaatctcac ggccaggttc tatgccctgt ccaagcgtaa accctcttgg
1501 aaacttcttt tggggcaatt ttcctgtggc cttcctggcc tctacttcca tgtgcgcagc
1561 cccacagacg ttgctgagca actcgccagc ctcctgagct ccatgcccat caggactcta
1621 gcctctgacc ttgctgttga ctctgaaatc aggatttgga agttttcgaa ttaggagtag
1681 agagatctga cctcttgcca ggaatgccca tggatcatgt gattggcttt tctacccata
1741 gagggccttg cagcctgata ccacctggga gtgagggtca caaaggagac cttggctccc
1801 tcaggtcacc aataaacctg ttctttaatc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaa
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