LOCUS BC000093 1695 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens damage-specific DNA binding protein 2, 48kDa, mRNA
(cDNA clone MGC:1561 IMAGE:3508134), complete cds.
ACCESSION BC000093
VERSION BC000093.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1695)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1695)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000093.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: d Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557514.
FEATURES Location/Qualifiers
source 1..1695
/db_xref="H-InvDB:HIT000029339"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1561 IMAGE:3508134"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1695
/gene="DDB2"
/db_xref="GeneID:1643"
/db_xref="HGNC:HGNC:2718"
/db_xref="MIM:600811"
CDS 24..1307
/gene="DDB2"
/codon_start=1
/product="damage-specific DNA binding protein 2, 48kDa"
/protein_id="AAH00093.1"
/db_xref="GeneID:1643"
/db_xref="HGNC:HGNC:2718"
/db_xref="MIM:600811"
/translation="MAPKKRPETQKTSEIVLRPRNKRSRSPLELEPEAKKLCAKGSGP
SRRCDSDCLWVGLAGPQILPPCRSIVRTLHQHKLGRASWPSVQQGLQQSFLHTLDSYR
ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSIT
GLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVT
GDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVR
GKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHF
QHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESS
GISSLNEFNPMGDTLASAMGYHILIWSQEEARTRK"
BASE COUNT 433 a 452 c 447 g 363 t
ORIGIN
1 taccccttca cacggaggac gcgatggctc ccaagaaacg cccagaaacc cagaagacct
61 ccgagattgt attacgcccc aggaacaaga ggagcaggag tcccctggag ctggagcccg
121 aggccaagaa gctctgtgcg aagggctccg gtcctagcag aagatgtgac tcagactgcc
181 tctgggtggg gctggctggc ccacagatcc tgccaccatg ccgcagcatc gtcaggaccc
241 tccaccagca taagctgggc agagcttcct ggccatctgt ccagcagggg ctccagcagt
301 cctttttgca cactctggat tcttaccgga tattacaaaa ggctgccccc tttgacagga
361 gggctacatc cttggcgtgg cacccaactc accccagcac cgtggctgtg ggttccaaag
421 ggggagatat catgctctgg aattttggca tcaaggacaa acccaccttc atcaaaggga
481 ttggagctgg agggagcatc actgggctga agtttaaccc tctcaatacc aaccagtttt
541 acgcctcctc aatggaggga acaactaggc tgcaagactt taaaggcaac attctacgag
601 tttttgccag ctcagacacc atcaacatct ggttttgtag cctggatgtg tctgctagta
661 gccgaatggt ggtcacagga gacaacgtgg ggaacgtgat cctgctgaac atggacggca
721 aagagctttg gaatctcaga atgcacaaaa agaaagtgac gcatgtggcc ctgaacccat
781 gctgtgattg gttcctggcc acagcctccg tagatcaaac agtgaaaatt tgggacctgc
841 gccaggttag agggaaagcc agcttcctct actcgctgcc gcacaggcat cctgtcaacg
901 cagcttgttt cagtcccgat ggagcccggc tcctgaccac ggaccagaag agcgagatcc
961 gagtttactc tgcttcccag tgggactgcc ccctgggcct gatcccgcac cctcaccgtc
1021 acttccagca cctcacacct atcaaggcag cctggcatcc tcgctacaac ctcattgttg
1081 tgggccgata cccagatcct aatttcaaaa gttgtacccc ttatgaattg aggacgatcg
1141 acgtgttcga tggaaactca gggaagatga tgtgtcagct ctatgaccca gaatcttctg
1201 gcatcagttc gcttaatgaa ttcaatccca tgggggacac gctggcctct gcaatgggtt
1261 accacattct catctggagc caggaggaag ccaggacacg gaagtgagag acactaaaga
1321 aggtgtgggc cagacaaggc cttggagccc acacatggga tcaagtcctg caagcagagg
1381 tggcgatttg ttaaagggcc aaaagtatcc aaggttaggg ttggagcagg ggtgctggga
1441 cctggggcac tgtgggactg ggacactttt atgttaatgc tctggacttg cctccagaga
1501 ctgctccaga gttggtgaca cagctgtccc aagggcccct ctgtatctag cctggaacca
1561 aggttatctt ggaactaaat gacttttctc ctctcagtgg gtggtagcag agggatcaag
1621 cagttatttg atttgtgctc acttttgata tggccaataa aaccataccg actgaaaaaa
1681 aaaaaaaaaa aaaaa
//