LOCUS BC000089 1547 bp mRNA linear HUM 05-NOV-2003
DEFINITION Homo sapiens SH3-domain GRB2-like 1, mRNA (cDNA clone
IMAGE:3509447), partial cds.
ACCESSION BC000089
VERSION BC000089.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1547)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1547)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC000089.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: l Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1547
/db_xref="H-InvDB:HIT000085786"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3509447"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1547
/gene="SH3GL1"
/gene_synonym="CNSA1"
/gene_synonym="EEN"
/gene_synonym="SH3D2B"
/gene_synonym="SH3P8"
/db_xref="GeneID:6455"
/db_xref="MIM:601768"
CDS <1..298
/gene="SH3GL1"
/gene_synonym="CNSA1"
/gene_synonym="EEN"
/gene_synonym="SH3D2B"
/gene_synonym="SH3P8"
/codon_start=2
/product="SH3GL1 protein"
/protein_id="AAH00089.2"
/db_xref="GeneID:6455"
/db_xref="MIM:601768"
/translation="SNGGFPCTTAPKIAASSSFRSSDKPIRTPSRSMPPLDQPSCKAL
YDFEPENDGELGFHEGDVITLTNQIDENWYEGMLDGQSGFFPLSYVEVLVPLPQ"
misc_feature 110..280
/gene="SH3GL1"
/gene_synonym="CNSA1"
/gene_synonym="EEN"
/gene_synonym="SH3D2B"
/gene_synonym="SH3P8"
/note="SH3; Region: Src homology 3 domains"
/db_xref="CDD:smart00326"
BASE COUNT 297 a 569 c 407 g 274 t
ORIGIN
1 gtccaacggg ggcttcccct gcaccacagc ccccaagatc gcagcttcat cgtctttccg
61 atcttccgac aagcccatcc ggacccctag ccggagcatg ccgcccctgg accagccgag
121 ctgcaaggcg ctgtacgact tcgagcccga gaacgacggg gagctgggct tccatgaggg
181 cgacgtcatc acgctgacca accagatcga tgagaactgg tacgagggca tgctggacgg
241 ccagtcgggc ttcttcccgc tcagctacgt ggaggtgctt gtgcccctgc cgcagtgact
301 cacccgtgtc cccgccccgc ccctccgtcc acactggccg gcaccccctg ctgggtctcc
361 tgcattccac ggagcccctg ctgccagggc ggtgtctgag cctgccggcg ccacctgggc
421 cccggccctt gaggtactcc ctgagcagga ccccacactt gggtgggggg gcttatctgg
481 gtgggtgggg atgcctgttt acactagcgc tgactcccaa cggtgacggc tcccttcccc
541 actccatggc gccagcctcc tcccccgctc cccaacttct cgcccagctg gccgaggcgg
601 ggcaacacta aggtgctctt agaaacacta atgttcctct ggggcagccc ccacctccgt
661 cctgacccga cgggggcccg gcccacttcc taccctcgag tcccgcagcc ttaacaggat
721 gggatcgagg gtccccatgg ggtggctcag agataggacc ctggttttaa atccctccca
781 gcctggtgct ggtgatgggc cctggcccta ctccagggcc aatgcacccc cgcctcacac
841 acgcactcct tctcctcaag gccagggcag agggcctcac cgcctcccgg gcctgctgtc
901 agcttgcagc ccggggacag aggccagctg ggatctgcct gaggacagag aacatggtct
961 cctgcagggc cctgcctccc aagccccgcc ctcagaaagc caagtacctt ttcagctttt
1021 taactgcccc catcccaacc cagggaggcc tgtgtcactc tggcacaagc tgccaccacc
1081 agccacccac acccacccca gcacacctca cacgggacca cagccgcgct gccgagggcc
1141 aagcacaaag gttccagtga gcgcatgtcc cagcccctgg tggccaggct ccccttgctg
1201 agccgctgcc acttcaccct gtgggaagtg gccccagcca tctcctctag accaaggcag
1261 gcagccccga catctgcttc ctctatcgcc caatgcaaaa tcgatgaaat ggggagttct
1321 ctgggccagg ccacattcac attcccctcc ccctgtggtc cagtgaagcc tccggacccc
1381 aggctctgct ctgccctgcc ctgcaccccc ctcgtcagaa gtacatgagg ggcgcagaga
1441 tgagcacaca gctttgggca cggtccaggg caaactgaaa tgtacgcctg aattttgtaa
1501 acagaagtat taaatgtctc tttctacaaa aaaaaaaaaa aaaaaaa
//