LOCUS BC000087 1100 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ribosomal protein, large, P0, mRNA (cDNA clone
MGC:3280 IMAGE:3507437), complete cds.
ACCESSION BC000087
VERSION BC000087.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1100)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1100)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000087.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: m Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1100
/db_xref="H-InvDB:HIT000029335"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3280 IMAGE:3507437"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1100
/gene="RPLP0"
/gene_synonym="L10E"
/gene_synonym="P0"
/gene_synonym="PRLP0"
/gene_synonym="RPP0"
/db_xref="GeneID:6175"
/db_xref="HGNC:HGNC:10371"
/db_xref="MIM:180510"
CDS 62..1015
/gene="RPLP0"
/gene_synonym="L10E"
/gene_synonym="P0"
/gene_synonym="PRLP0"
/gene_synonym="RPP0"
/codon_start=1
/product="ribosomal protein, large, P0"
/protein_id="AAH00087.1"
/db_xref="GeneID:6175"
/db_xref="HGNC:HGNC:10371"
/db_xref="MIM:180510"
/translation="MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIR
MSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDML
LANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQL
IKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEG
VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFV
AAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD"
BASE COUNT 275 a 292 c 281 g 252 t
ORIGIN
1 gtcctcgtgg aagtgacatc gtctttaaac cctgcgtggc aatccctgac gcaccgccgt
61 gatgcccagg gaagacaggg cgacctggaa gtccaactac ttccttaaga tcatccaact
121 attggatgat tatccgaaat gtttcattgt gggagcagac aatgtgggct ccaagcagat
181 gcagcagatc cgcatgtccc ttcgcgggaa ggctgtggtg ctgatgggca agaacaccat
241 gatgcgcaag gccatccgag ggcacctgga aaacaaccca gctctggaga aactgctgcc
301 tcatatccgg gggaatgtgg gctttgtgtt caccaaggag gacctcactg agatcaggga
361 catgttgctg gccaataagg tgccagctgc tgcccgtgct ggtgccattg ccccatgtga
421 agtcactgtg ccagcccaga acactggtct cgggcccgag aagacctcct ttttccaggc
481 tttaggtatc accactaaaa tctccagggg caccattgaa atcctgagtg atgtgcagct
541 gatcaagact ggagacaaag tgggagccag cgaagccacg ctgctgaaca tgctcaacat
601 ctcccccttc tcctttgggc tggtcatcca gcaggtgttc gacaatggca gcatctacaa
661 ccctgaagtg cttgatatca cagaggaaac tctgcattct cgcttcctgg agggtgtccg
721 caatgttgcc agtgtctgtc tgcagattgg ctacccaact gttgcatcag taccccattc
781 tatcatcaac gggtacaaac gagtcctggc cttgtctgtg gagacggatt acaccttccc
841 acttgctgaa aaggtcaagg ccttcttggc tgatccatct gcctttgtgg ctgctgcccc
901 tgtggctgct gccaccacag ctgctcctgc tgctgctgca gccccagcta aggttgaagc
961 caaggaagag tcggaggagt cggacgagga tatgggattt ggtctctttg actaatcacc
1021 aaaaagcaac caacttagcc agttttattt gcaaaacaag gaaataaagg cttacttctt
1081 taaaaaaaaa aaaaaaaaaa
//