LOCUS BC000086 1871 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens homocysteine-inducible, endoplasmic reticulum
stress-inducible, ubiquitin-like domain member 1, mRNA (cDNA clone
MGC:2246 IMAGE:3504515), complete cds.
ACCESSION BC000086
VERSION BC000086.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1871)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1871)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: c Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58530855.
FEATURES Location/Qualifiers
source 1..1871
/db_xref="H-InvDB:HIT000029334"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2246 IMAGE:3504515"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1871
/gene="HERPUD1"
/gene_synonym="HERP"
/gene_synonym="KIAA0025"
/gene_synonym="Mif1"
/gene_synonym="SUP"
/db_xref="GeneID:9709"
/db_xref="HGNC:HGNC:13744"
/db_xref="MIM:608070"
CDS 91..1266
/gene="HERPUD1"
/gene_synonym="HERP"
/gene_synonym="KIAA0025"
/gene_synonym="Mif1"
/gene_synonym="SUP"
/codon_start=1
/product="homocysteine-inducible, endoplasmic reticulum
stress-inducible, ubiquitin-like domain member 1"
/protein_id="AAH00086.1"
/db_xref="GeneID:9709"
/db_xref="HGNC:HGNC:13744"
/db_xref="MIM:608070"
/translation="MESETEPEPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRV
YPERPRPEDQRLIYSGKLLLDHQCLRDLLPKQEKRHVLHLVCNVKSPSKMPEINAKVA
ESTEEPAGSNRGQYPEDSSSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFS
GYTPYGWLQLSWFQQIYARQYYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQ
FPAENQPANQNAAPQVVVNPGANQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSV
FLSILYFYSSLSRFLMVMGATVVMYLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNN
NLQEGTDPETEDPNHLPPDRDVLDGEQTSPSFMSTAWLVFKTFFASLLPEGPPAIAN"
BASE COUNT 482 a 446 c 452 g 491 t
ORIGIN
1 gaactgtcgt tgcagagatt gcgggcggct gagacgccgc ctgcctggca cctaggagcg
61 cagcggagcc ccgacaccgc cgccgccgcc atggagtccg agaccgaacc cgagcccgtc
121 acgctcctgg tgaagagccc caaccagcgc caccgcgact tggagctgag tggcgaccgc
181 ggctggagtg tgggccacct caaggcccac ctgagccgcg tctaccccga gcgtccgcgt
241 ccagaggacc agaggttaat ttattctggg aagctgttgt tggatcacca atgtctcagg
301 gacttgcttc caaagcagga aaaacggcat gttttgcatc tggtgtgcaa tgtgaagagt
361 ccttcaaaaa tgccagaaat caacgccaag gtggctgaat ccacagagga gcctgctggt
421 tctaatcggg gacagtatcc tgaggattcc tcaagtgatg gtttaaggca aagggaagtt
481 cttcggaacc tttcttcccc tggatgggaa aacatctcaa ggcctgaagc tgcccagcag
541 gcattccaag gcctgggtcc tggtttctcc ggttacacac cctatgggtg gcttcagctt
601 tcctggttcc agcagatata tgcacgacag tactacatgc aatatttagc agccactgct
661 gcatcagggg cttttgttcc accaccaagt gcacaagaga tacctgtggt ctctgcacct
721 gctccagccc ctattcacaa ccagtttcca gctgaaaacc agcctgccaa tcagaatgct
781 gctcctcaag tggttgttaa tcctggagcc aatcaaaatt tgcggatgaa tgcacaaggt
841 ggccctattg tggaagaaga tgatgaaata aatcgagatt ggttggattg gacctattca
901 gcagctacat tttctgtttt tctcagtatc ctctacttct actcctccct gagcagattc
961 ctcatggtca tgggggccac cgttgttatg tacctgcatc acgttgggtg gtttccattt
1021 agaccgaggc cggttcagaa cttcccaaat gatggtcctc ctcctgacgt tgtaaatcag
1081 gaccccaaca ataacttaca ggaaggcact gatcctgaaa ctgaagaccc caaccacctc
1141 cctccagaca gggatgtact agatggcgag cagaccagcc cctcctttat gagcacagca
1201 tggcttgtct tcaagacttt ctttgcctct cttcttccag aaggcccccc agccatcgca
1261 aactgatggt gtttgtgctg tagctgttgg aggctttgac aggaatggac tggatcacct
1321 gactccagct agattgcctc tcctggacat ggcaatgatg agtttttaaa aaacagtgtg
1381 gatgatgata tgcttttgtg agcaagcaaa agcagaaacg tgaagccgtg atacaaattg
1441 gtgaacaaaa aatgcccaag gcttctcatg tctttattct gaagagcttt aatatatact
1501 ctatgtagtt taataagcac tgtacgtaga aggccttagg tgttgcatgt ctatgcttga
1561 ggaacttttc caaatgtgtg tgtctgcatg tgtgtttgta catagaagtc atagatgcag
1621 aagtggttct gctggtacga tttgattcct gttggaatgt ttaaattaca ctaagtgtac
1681 tactttatat aatcaatgaa attgctagac atgttttagc aggacttttc taggaaagac
1741 ttatgtataa ttgcttttta aaatgcagtg ctttacttta aactaagggg aactttgcgg
1801 aggtgaaaac ctttgctggg ttttctgttc aataaagttt tactatgaat gaaaaaaaaa
1861 aaaaaaaaaa a
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