LOCUS BC000082 1553 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens serrate RNA effector molecule homolog (Arabidopsis),
mRNA (cDNA clone IMAGE:3505975), partial cds.
ACCESSION BC000082
VERSION BC000082.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1553)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1553)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000082.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: l Column: 19.
FEATURES Location/Qualifiers
source 1..1553
/db_xref="H-InvDB:HIT000029330"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3505975"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1553
/gene="SRRT"
/gene_synonym="ARS2"
/gene_synonym="ASR2"
/gene_synonym="serrate"
/db_xref="GeneID:51593"
/db_xref="HGNC:HGNC:24101"
CDS <1..1420
/gene="SRRT"
/gene_synonym="ARS2"
/gene_synonym="ASR2"
/gene_synonym="serrate"
/codon_start=2
/product="SRRT protein"
/protein_id="AAH00082.2"
/db_xref="GeneID:51593"
/db_xref="HGNC:HGNC:24101"
/translation="KDAAGLECKPRPLHKTCSLFMRNIAPNISRAEIISLCKRYPGFM
RVALSEPQPERRFFRRGWVTFDRSVNIKEICWNLQNIRLRECELSPGVNRDLTRRVRN
INGITQHKQIVRNDIKLAAKLIHTLDDRTQLWASEPGTPPLPTSLPSQNPILKNITDY
LIEEVSAEEEELLGSSGGAPPEEPPKEGNPAEINVERDEKLIKVLDKLLLYLRIVHSL
DYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKTFEEKLTPLLSVRESL
SEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKKFKGPEFVRKHIFNKHAE
KIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQILPPGLTPGLPYPHQTPQGLM
PYGQPRPPILGYGAGAVRPAVPTGGPPYPHAPYGAGRGNYDAFRGQGGYPGKPRNRMV
RGDPRAIVEYRDLDAPDDVDFF"
BASE COUNT 375 a 450 c 428 g 300 t
ORIGIN
1 caaggacgcc gcggggctgg agtgcaagcc gcggccgctg cataagacct gctccctctt
61 catgcgcaac atcgcgccca acatctcccg ggccgagatc atctcccttt gtaaaaggta
121 cccaggcttt atgcgggtgg cgctctcaga gccccagcca gagaggaggt ttttccgtcg
181 tggctgggtg accttcgacc gcagtgttaa cattaaagag atctgttgga acctgcagaa
241 catccgtctc cgggagtgtg agctgagccc tggtgtgaac agggacctga cccggcgcgt
301 tcgcaacatc aacggcatca cccagcacaa gcagattgtg cgcaacgaca tcaagctggc
361 ggccaagctg atccacacgc tggatgacag gacacagctt tgggcctcag aaccagggac
421 gcctcccctg cccacgagcc tgccctcgca aaacccgatc ttgaagaata tcaccgacta
481 cctgatcgag gaagtaagcg ccgaggagga ggagctgctg gggagcagcg ggggcgctcc
541 tcctgaggag cctcctaagg aagggaaccc ggcagagatc aacgtggagc gggatgagaa
601 gttgattaag gtcttggaca agctcctcct ttacctgcgc atcgtgcatt ccttggatta
661 ttacaacacc tgtgagtacc ccaacgagga cgagatgccc aatcgctgtg ggatcatcca
721 cgttcggggg cccatgccac ccaaccgcat cagtcacggg gaagtgctgg agtggcagaa
781 gacttttgag gagaagctca cgccgttgct gagtgtgcgg gagtcactct cagaggaaga
841 ggcccagaag atggggcgca aagacccaga gcaggaagtg gagaagttcg tcacctccaa
901 cacgcaggaa ctgggcaagg ataagtggct gtgtcctctc agtggcaaga aattcaaggg
961 tcctgagttt gtgcgcaaac atatcttcaa caagcatgca gagaaaattg aggaagtgaa
1021 aaaggaagtc gcgtttttta acaacttcct cactgatgct aagcgcccag ctctgcctga
1081 gatcaagcca gcccagccac ctggccccgc ccagatactc cccccaggtt tgaccccagg
1141 actcccctac ccacaccaga ctccccaggg cctgatgccc tatggtcagc cccggccccc
1201 gatcttgggc tatggagctg gtgctgtccg ccctgcagtc cccacaggag gccctccata
1261 cccccatgcc ccgtatggtg ctggtcgagg gaactatgat gccttccgag gccagggagg
1321 ttatcctggg aaacctcgca acaggatggt tcgtggagac ccaagggcca ttgtggaata
1381 tcgggacctg gatgccccag acgatgttga tttcttttga gccgtccccc gttcctcagt
1441 cctgtatcat ccatacttgt actaccttgt cctatgaagc tctgagaatt ttttgtacga
1501 tcagccttac tgctaataaa agcacttcca cagggaaaaa aaaaaaaaaa aaa
//