LOCUS BC000064 917 bp mRNA linear HUM 25-AUG-2005
DEFINITION Homo sapiens Y box binding protein 1, mRNA (cDNA clone
IMAGE:3510030), partial cds.
ACCESSION BC000064
VERSION BC000064.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 917)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 917)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000064.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: p Column: 20.
FEATURES Location/Qualifiers
source 1..917
/db_xref="H-InvDB:HIT000085780"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3510030"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>917
/gene="YBX1"
/gene_synonym="BP-8"
/gene_synonym="CSDA2"
/gene_synonym="CSDB"
/gene_synonym="DBPB"
/gene_synonym="MDR-NF1"
/gene_synonym="NSEP-1"
/gene_synonym="YB-1"
/gene_synonym="YB1"
/db_xref="GeneID:4904"
/db_xref="MIM:154030"
CDS 119..>917
/gene="YBX1"
/gene_synonym="BP-8"
/gene_synonym="CSDA2"
/gene_synonym="CSDB"
/gene_synonym="DBPB"
/gene_synonym="MDR-NF1"
/gene_synonym="NSEP-1"
/gene_synonym="YB-1"
/gene_synonym="YB1"
/codon_start=1
/product="YBX1 protein"
/protein_id="AAH00064.1"
/db_xref="GeneID:4904"
/db_xref="MIM:154030"
/translation="MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTS
AAPAGGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS
VGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQ
NYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVM
EGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEKKKKK"
BASE COUNT 255 a 259 c 274 g 129 t
ORIGIN
1 ggagagcgga ccccagagag ccctgagcag ccccaccgcc gccgccggcc tagttaccat
61 cacaccccgg gaggagccgc agctgccgca gccggcccca gtcaccatca ccgcaaccat
121 gagcagcgag gccgagaccc agcagccgcc cgccgccccc cccgccgccc ccgccctcag
181 cgccgccgac accaagcccg gcactacggg cagcggcgca gggagcggtg gcccgggcgg
241 cctcacatcg gcggcgcctg ccggcgggga caagaaggtc atcgcaacga aggttttggg
301 aacagtaaaa tggttcaatg taaggaacgg atatggtttc atcaacagga atgacaccaa
361 ggaagatgta tttgtacacc agactgccat aaagaagaat aaccccagga agtaccttcg
421 cagtgtagga gatggagaga ctgtggagtt tgatgttgtt gaaggagaaa agggtgcgga
481 ggcagcaaat gttacaggtc ctggtggtgt tccagttcaa ggcagtaaat atgcagcaga
541 ccgtaaccat tatagacgct atccacgtcg taggggtcct ccacgcaatt accagcaaaa
601 ttaccagaat agtgagagtg gggaaaagaa cgagggatcg gagagtgctc ccgaaggcca
661 ggcccaacaa cgccggccct accgcaggcg aaggttccca ccttactaca tgcggagacc
721 ctatgggcgt cgaccacagt attccaaccc tcctgtgcag ggagaagtga tggagggtgc
781 tgacaaccag ggtgcaggag aacaaggtag accagtgagg cagaatatgt atcggggata
841 tagaccacga ttccgcaggg gccctcctcg ccaaagacag cctagagagg acggcaatga
901 aaaaaaaaaa aaaaaaa
//