LOCUS BC000052 1571 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens peroxisome proliferator-activated receptor alpha, mRNA
(cDNA clone IMAGE:3505209).
ACCESSION BC000052
VERSION BC000052.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1571)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1571)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000052.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: b Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61744440
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1571
/db_xref="H-InvDB:HIT000029311"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3505209"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 424 a 377 c 374 g 396 t
ORIGIN
1 gaagttcaag atcaaagtgc cagcagattc agtgtcatgt gaggacgtgc ttcctgcttc
61 atagataaga gtgccacacc cccctgtccc agtgcactgg ggctgtggat cccttcaaag
121 ctgagattgc ctgtctgtgg tctccagcgt taagcacagt cattagctca gcttggagct
181 cggcggcaca accagcacca tctggtcgcg atggtggaca cggaaagccc actctgcccc
241 ctctccccac tcgaggccgg cgatctagag agcccgttat ctgaagagtt cctgcaagaa
301 atgggaaaca tccaagagat ttcgcaatcc atcggcgagg atagttctgg aagctttggc
361 tttacggaat accagtattt aggaagctgt cctggctcag atggctcggt catcacggac
421 acgctttcac cagcttcgag cccctcctcg gtgacttatc ctgtggtccc cggcagcgtg
481 gacgagtctc ccagtggagc attgaacatc gaatgtagaa tctgcgggga caaggcctca
541 ggctatcatt acggagtcca cgcgtgtgaa ggctgcaagg gcttctttcg gcgaacgatt
601 cgactcaagc tggtgtatga caagtgcgac cgcagctgca agatccagaa aaagaacaga
661 aacaaatgcc agtattgtcg atttcacaag tgcctttctg tcgggatgtc acacaacgcg
721 attcgttttg gacgaatgcc aagatctgag aaagcaaaac tgaaagcaga aattcttacc
781 tgtgaacatg acatagaaga ttctgaaact gcagatctca aatctctggc caagagaatc
841 tacgaggcct acttgaagaa cttcaacatg aacaaggtca aagcccgggt catcctctca
901 ggaaaggcca gtaacaatcc agtaggtgtt tgcggctgtt ctgggttctc ttggcaacat
961 ggaaccagtg tcgtagagga cgattaagga cacatgtgtt gaatgttgag aaaattatat
1021 ttatcccaca gttaagcaaa ggacagcgaa gatggaaaca gttcattctg agactctgag
1081 ctgtagctta acaacaactc ctttcttctt gcttggagcc acctcaaagc tcttagcaac
1141 taagttatta tactggctat gtaattaata cacttaaaaa aaaccttaat agcttaccaa
1201 gtactaagat gatttcttag gagcattttt tcttaaatag agataggttc ttgctctgtt
1261 gcccaggctg gaatgcagtg gtgcaatcat agttcactgc agccttgaac tcctgggctc
1321 aagcaatcct cctgcctcag cctcccaagg agctgggact acaggtgtgc accaccacac
1381 ctggctatgt ttgatgttgt tgttgttttg ttttgttttt gttttttggt agagatgaga
1441 tgtttcccag gctggtctca aactcctggc ctcaagtgat cttcccacct cggcctccca
1501 aagcactggc attacaggtg tgagtcatgg cacccagcat taactggatt taaaaaaaaa
1561 aaaaaaaaaa a
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