LOCUS BC000048 1022 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 17, mRNA
(cDNA clone MGC:944 IMAGE:3507470), complete cds.
ACCESSION BC000048
VERSION BC000048.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1022)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1022)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000048.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922562.
FEATURES Location/Qualifiers
source 1..1022
/db_xref="H-InvDB:HIT000029307"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:944 IMAGE:3507470"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1022
/gene="DNAJC17"
/gene_synonym="FLJ10634"
/db_xref="GeneID:55192"
/db_xref="HGNC:HGNC:25556"
CDS 19..933
/gene="DNAJC17"
/gene_synonym="FLJ10634"
/codon_start=1
/product="DnaJ (Hsp40) homolog, subfamily C, member 17"
/protein_id="AAH00048.1"
/db_xref="GeneID:55192"
/db_xref="HGNC:HGNC:25556"
/translation="MAVTKELLQMDLYALLGIEEKAADKEVKKAYRQKALSCHPDKNP
DNPRAAELFHQLSQALEVLTDAAARAAYDKVRKAKKQAAERTQKLDEKRKKVKLDLEA
RERQAQAQESEEEEESRSTRTLEQEIERLREEGSRQLEEQQRLIREQIRQERDQRLRG
KAENTEGQGTPKLKLKWKCKKEDESKGGYSKDVLLRLLQKYGEVLNLVLSSKKPGTAV
VEFATVKAAELAVQNEVGLVDNPLKISWLEGQPQDAVGRSHSGLSKGSVLSERDYESL
VMMRMRQAAERQQLIARMQQEDQEGPPT"
BASE COUNT 300 a 249 c 310 g 163 t
ORIGIN
1 atccgtcagg ccggaaccat ggcagtgacc aaggagctct tacagatgga cctgtacgcg
61 ctgctaggca ttgaggagaa ggcagcggac aaagaggtaa agaaggcgta taggcagaag
121 gccctctcct gccacccaga caaaaatcca gataatccca gagcagctga actcttccac
181 cagctttctc aggccttgga ggtgctgacc gatgctgcag ccagggctgc atatgacaag
241 gtcaggaaag ccaagaagca agcagcagag aggacccaga aacttgatga gaaaaggaag
301 aaagtgaagc ttgacctgga ggcccgggag cggcaggccc aggcccagga gagtgaggag
361 gaagaggaga gccggagcac caggacacta gagcaagaga tcgaacgcct gagagaagag
421 ggttcccggc agctggagga acagcagagg ctcatccggg agcagatacg ccaggagcgt
481 gaccagaggt tgagaggaaa ggcagaaaat actgaaggcc aaggaacccc caaactaaag
541 ctaaaatgga agtgcaagaa ggaggatgag tcaaaaggtg gctactccaa agacgtcctc
601 ctacggcttt tgcagaagta tggtgaggtt ctcaacctgg tgctttccag taagaagcca
661 ggcactgctg tggtggagtt tgcaaccgtc aaggcagcgg agctggctgt ccagaatgaa
721 gttggcctgg tggataaccc tctgaagatt tcctggttgg agggacagcc ccaggatgcc
781 gtgggccgca gccactcagg actgtcaaag ggctcagtgc tgtcagagag ggactacgag
841 agcctcgtca tgatgcgcat gcgccaggcg gccgagcggc aacagctgat cgcacggatg
901 cagcaggaag accaggaggg gccgcctacg tagccccagc tccagccatc cacccctcag
961 cccttttctt caacgtcacc aataaaattt tttttttttt tttaaaaaaa aaaaaaaaaa
1021 aa
//