LOCUS BC000022 2647 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 2, mRNA
(cDNA clone MGC:787 IMAGE:3505936), complete cds.
ACCESSION BC000022
VERSION BC000022.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2647)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2647)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000022.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: p Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22547214.
FEATURES Location/Qualifiers
source 1..2647
/db_xref="H-InvDB:HIT000029287"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:787 IMAGE:3505936"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2647
/gene="PPIL2"
/gene_synonym="CYC4"
/gene_synonym="CYP60"
/gene_synonym="hCyP-60"
/gene_synonym="MGC33174"
/gene_synonym="MGC787"
/db_xref="GeneID:23759"
/db_xref="HGNC:HGNC:9261"
/db_xref="MIM:607588"
CDS 79..1662
/gene="PPIL2"
/gene_synonym="CYC4"
/gene_synonym="CYP60"
/gene_synonym="hCyP-60"
/gene_synonym="MGC33174"
/gene_synonym="MGC787"
/codon_start=1
/product="peptidylprolyl isomerase (cyclophilin)-like 2"
/protein_id="AAH00022.1"
/db_xref="GeneID:23759"
/db_xref="HGNC:HGNC:9261"
/db_xref="MIM:607588"
/translation="MGKRQHQKDKMYITCAEYTHFYGGKKPDLPQTNFRRLPFDHCSL
SLQPFVYPVCTPDGIVFDLLNIVPWLKKYGTNPSNGEKLDGRSLIKLNFSKNSEGKYH
CPVLFTVFTNNTHIVAVRTTGNVYAYEAVEQLNIKAKNFRDLLTDEPFSRQDIITLQD
PTNLDKFNVSNFYHVKNNMKIIDPDEEKAKQDPSYYLKNTNAETRETLQELYKEFKGD
EILAATMKAPEKKKVDKLNAAHYSTGKVSASFTSTAMVPETTHEAAAIDEDVLRYQFV
KKKGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGD
PTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDK
KHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDPYEEADAQIAQERK
TQLKVAPETKVKSSQPQAGSQGPQTFRQGVGKYINPAATEQQRKSPQPVPLSPCPRRS
PVGVLGTSAPGSSRLPDDH"
BASE COUNT 660 a 765 c 701 g 521 t
ORIGIN
1 gaactcggct gcggctccat ggtctgagtt gtcagccgtt gttttttcgt gctcgctagt
61 cgccgccgcc gctccgccat ggggaagcga cagcaccaaa aggacaaaat gtacattacc
121 tgtgctgaat acactcactt ttatggtggc aagaagccag atctcccaca aacaaatttt
181 cgtcgtttac cttttgacca ctgcagtctc tctctgcagc cctttgtcta cccagtctgc
241 actcccgatg gcatcgtctt tgacttactg aacattgttc catggcttaa gaagtacggg
301 accaacccca gcaatggaga gaagctggac gggaggtccc tgatcaagct gaacttttcc
361 aagaacagtg aggggaagta ccactgccca gtgctgttta ccgtgttcac caacaacacc
421 cacatcgtgg ctgtgaggac gaccggcaac gtctacgcct atgaggcagt ggaacagcta
481 aatatcaagg ccaagaactt ccgggacctg ctgaccgacg agcccttctc ccggcaggac
541 atcatcaccc tccaggaccc caccaatttg gacaagttca atgtctctaa cttctatcat
601 gtgaagaata acatgaaaat aatagaccca gatgaagaga aggccaaaca ggacccgtct
661 tattatctga aaaatacaaa tgccgagacc cgagagaccc tgcaggagct ctacaaggag
721 ttcaaagggg acgagattct ggcagccacc atgaaggccc cggagaagaa gaaagtggac
781 aagctgaatg ctgcccacta ttccacaggg aaggtcagcg cttccttcac ctccaccgcg
841 atggtcccgg agaccacaca tgaagcagct gccatcgacg aggatgtgct gcgctaccag
901 tttgtgaaga agaagggcta cgtgcggctg cacaccaaca agggcgacct caacctggag
961 ctgcactgcg acctgacacc aaaaacctgc gaaaacttca tcaggctttg caagaagcat
1021 tattacgatg gcaccatctt ccacagatcc atccggaact ttgtgatcca agggggcgac
1081 cccacaggca caggcacggg tggggagtca tactggggga agcccttcaa agacgagttc
1141 cggcccaacc tctcgcacac gggccgcggc atcctcagca tggccaactc cgggcccaac
1201 agcaacaggt ctcaattctt catcacgttt cgctcctgtg cctacctgga caagaagcat
1261 accatctttg gacgggttgt tgggggcttt gacgtactga cagccatgga gaatgtggag
1321 agtgacccca aaactgaccg ccctaaggag gagatccgca ttgatgccac tacagtgttc
1381 gtggacccct atgaggaggc cgatgcccag attgcgcagg agcggaagac acagctcaag
1441 gtagccccgg agaccaaagt gaagagcagc cagccccagg cagggagcca gggcccccag
1501 accttccgcc agggcgtggg caagtacatc aacccagcag ccaccgagca gcagaggaag
1561 agccctcaac cagtgccact gtccccatgt ccaagaagaa gcccagtcgg ggttttgggg
1621 acttcagctc ctggtagcag caggctgcct gatgaccact agaggtatgt ctgcccctcg
1681 tcaccctgct gcacaccaat ctgtggccct tcatcatgct aagaacaaga actgcgccat
1741 ggctggctcc ttctcttctc cagcccatcc ctctgcagcc tgtcatccct gtctgtgacc
1801 attggtcggg cccctgggct ctagagtgac ttttgacgcc ctccatccct cccgccaggc
1861 actgtcctcc gcaaggcctg gtgcagccct ggcagtaact ggcttgtaag aggctcagac
1921 accaagctgg gcctgcagag gaggggcaca gtaggacaca gtgactgccc aggtgtccac
1981 acacctgtag gcctctgagc cagcgtccag ggtacaggtg cgggtggtgg ggatgaaggc
2041 ctgaccaggg agtgagaagc aggtttggag aggaccctgt gcccaccctg acagacaccc
2101 tggctggccc tgactgactg tattctctgg ccacattcaa gtcccccatt ggtgggggca
2161 gagaagtagg accaggccat ccttggctcc agagctcgaa gaccccaaga cagccctctg
2221 ctctcagcgg cgccacagag agcctgggct cagccttctg catcaggaca tggcctcgtc
2281 cactgagggc acgatttaaa catttgacat cagaagcttt atttgtaaac ctcacacaga
2341 taaggaccaa gggctggcgg tgtggccaga ggacagggga agctgaaggc cccgtgcttg
2401 agctcggcag tcctgctcct tgcagtgaag ccaccatggg tgaccgtcca gcctcacccg
2461 gtggcctgca cagtgaggga agggcttcag ggccatctgc tcccagggca ggggacaggc
2521 caccaaggac ctttggcaaa tgaaggttta catttctgta gtttgtttgt tttagagctt
2581 aatttgtagt tttttagcta ttaaaaccat ttgaattttt aacgaaaaaa aaaaaaaaaa
2641 aaaaaaa
//