LOCUS BC000012 3053 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glutamine-fructose-6-phosphate transaminase 2, mRNA
(cDNA clone MGC:1837 IMAGE:3506723), complete cds.
ACCESSION BC000012
VERSION BC000012.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3053)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3053)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000012.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: m Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4826741.
FEATURES Location/Qualifiers
source 1..3053
/db_xref="H-InvDB:HIT000029280"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1837 IMAGE:3506723"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3053
/gene="GFPT2"
/gene_synonym="GFAT2"
/db_xref="GeneID:9945"
/db_xref="HGNC:HGNC:4242"
/db_xref="MIM:603865"
CDS 109..2157
/gene="GFPT2"
/gene_synonym="GFAT2"
/codon_start=1
/product="glutamine-fructose-6-phosphate transaminase 2"
/protein_id="AAH00012.1"
/db_xref="GeneID:9945"
/db_xref="HGNC:HGNC:4242"
/db_xref="MIM:603865"
/translation="MCGIFAYMNYRVPRTRKEIFETLIKGLQRLEYRGYDSAGVAIDG
NNHEVKERHIQLVKKRGKVKALDEELYKQDSMDLKVEFETHFGIAHTRWATHGVPSAV
NSHPQRSDKGNEFVVIHNGIITNYKDLRKFLESKGYEFESETDTETIAKLIKYVFDNR
ETEDITFSTLVERVIQQLEGAFALVFKSVHYPGEAVATRRGSPLLIGVRSKYKLSTEQ
IPILYRTCTLENVKNICKTRMKRLDSSACLHAVGDKAVEFFFASDASAIIEHTNRVIF
LEDDDIAAVADGKLSIHRVKRSASDDPSRAIQTLQMELQQIMKGNFSAFMQKEIFEQP
ESVFNTMRGRVNFETNTVLLGGLKDHLKEIRRCRRLIVIGCGTSYHAAVATRQVLEEL
TELPVMVELASDFLDRNTPVFRDDVCFFISQSGETADTLLALRYCKDRGALTVGVTNT
VGSSISRETDCGVHINAGPEVGVASTKAYTSQFISLVMFGLMMSEDRISLQNRRQEII
RGLRSLPELIKEVLSLEEKIHDLALELYTQRSLLVMGRGYNYATCLEGALKIKEITYM
HSEGILAGELKHGPLALIDKQMPVIMVIMKDPCFAKCQNALQQVTARQGRPIILCSKD
DTESSKFAYKTIELPHTVDCLQGILSVIPLQLLSFHLAVLRGYDVDFPRNLAKSVTVE
"
BASE COUNT 787 a 798 c 766 g 702 t
ORIGIN
1 gcggagccca cggagcccac ggagcccacg gaggagccca cggaggagcc ccagcgtccg
61 aacgggcaga ccccctcgag ccgcgaagga gcccgagaag cagccacgat gtgcggaatc
121 tttgcctaca tgaactacag agtcccccgg acgaggaagg agatcttcga aaccctcatc
181 aagggcctgc agcggctgga gtacagaggc tacgactcgg caggtgtggc gatcgatggg
241 aataatcacg aagtcaaaga aagacacatt cagctggtca agaaaagggg gaaagtcaag
301 gctctcgatg aagaacttta caaacaagac agcatggact taaaagtgga gtttgagaca
361 cacttcggca ttgcccacac gcgctgggcc acccacgggg tccccagtgc tgtcaacagc
421 caccctcagc gctcagacaa aggcaacgaa tttgttgtca tccacaatgg gatcatcaca
481 aattacaaag atctgaggaa atttctggaa agcaaaggct acgagtttga gtcagaaaca
541 gatacagaga ccatcgccaa gctgattaaa tatgtgttcg acaacagaga aactgaggac
601 attacgtttt caacgttggt cgagagagtc attcagcagt tggaaggtgc attcgcgctg
661 gttttcaaga gtgtccacta cccaggagaa gccgttgcca cacggagagg cagccccctg
721 ctcatcggag tccggagcaa atacaagctc tccacagaac agatccctat cttatacagg
781 acgtgcactc tggagaatgt gaagaatatc tgtaagacac ggatgaagag gctggacagc
841 tccgcctgcc tgcatgctgt gggcgacaag gccgtggaat tcttctttgc ttctgatgca
901 agcgctatca tagagcacac caaccgggtc atcttcctgg aggacgatga catcgccgca
961 gtggctgatg ggaaactctc cattcaccgg gtcaagcgct cggccagtga tgacccatct
1021 cgagccatcc agaccttgca gatggaactg cagcaaatca tgaaaggtaa cttcagtgcg
1081 tttatgcaga aggagatctt cgaacagcca gaatcagttt tcaatactat gagaggtcgg
1141 gtgaattttg aaaccaacac agtgctcctg ggtggcttga aggaccactt gaaggagatt
1201 cgacgatgcc gacggctcat cgtgattggc tgtggaacca gctaccacgc tgccgtggct
1261 acgcggcaag ttttggagga actgactgag cttcctgtga tggttgaact tgctagtgat
1321 tttctggaca ggaacacacc tgtgttcagg gatgacgttt gctttttcat cagccagtca
1381 ggcgagaccg cggacaccct cctggcgctg cgctactgta aggaccgcgg cgctctcacc
1441 gtgggcgtca ccaacaccgt gggcagctcc atctctcgcg agaccgactg cggcgtccac
1501 atcaacgcag ggccggaggt cggcgtggcc agcaccaagg cttataccag tcagttcatc
1561 tctctggtga tgtttggttt gatgatgtct gaagaccgaa tttcactaca aaacaggagg
1621 caagagatca tccgtggctt gagatcttta cctgagctga tcaaggaagt gctgtctctg
1681 gaggagaaga tccacgactt ggccctggag ctctacacgc agagatcgct gctggtgatg
1741 gggcggggct acaactatgc cacctgcctg gaaggagccc tgaaaattaa agagataacc
1801 tacatgcact cagaaggcat cctggctggg gagctgaagc acgggcccct ggcactgatt
1861 gacaagcaga tgcccgtcat catggtcatt atgaaggatc cttgcttcgc caaatgccag
1921 aacgccctgc agcaagtcac ggcccgccag ggtcgcccca ttatactgtg ctccaaggac
1981 gatactgaaa gttccaagtt tgcgtataag acaatcgagc tgccccacac tgtggactgc
2041 ctccagggca tcctgagcgt gattccgctg cagctgctgt ccttccacct ggctgttctc
2101 cgaggatatg acgttgactt ccccagaaat ctggccaagt ctgtaactgt ggaatgaggc
2161 tgagaccgtg acaagaccat caccaccttt catctgattc cagacctgtc ccaacagcag
2221 ggatgctaca tgggaagaga agtggacatc ccacatgttc tgcgtgctcc tgtagagctt
2281 gacagcttcc acgtgccttc tacccaagtg cttttgctta cagcagatac tgtttctctg
2341 tgtcctgaag tcgccagagg agaagggaat cattgtttac acatggggat cagagcagac
2401 ttctccacta ctgtgcaata gagatacagc tctcttcaga gtaactgtga accttttata
2461 accaacacta gagttagttt taaaagacaa gatatttata atgacgactg tatagctttt
2521 aagttatttt tctagtatgt ggctttctgt agccgtggta acggccaaac tgttcatcct
2581 agctacccat gctctgtgtc caggcttgct cctggcaggt ggcattcatc tcagatgtga
2641 gcacaaggca ttggccctct ggactccttt ctccttttct ttcctctcta ggctgctcct
2701 gaatcctgtt ctctgacatc cgtggagccc ctcctgcatc cacctatgcc tcctataagt
2761 ccaattgaaa tctcagcctc cttcaacatt ttcttctcgt gtgtggccca catccctcca
2821 cttctccaac ttctgtttaa tctgatcacg gctcttttta agccctggca gcattttggt
2881 ccctgctcct tgcccatagt aaaacagctt gaaatatccc atgcaagaga gtagtttcaa
2941 gtgggcaact ctgctctcta tttaaaagcg tgcacaatca aaagtactat gcaattttag
3001 gacaataaag aacatacagt ttttttgtgt gaaaaaaaaa aaaaaaaaaa aaa
//