LOCUS BC000006 1221 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, Na+/K+ transporting, beta 1 polypeptide, mRNA
(cDNA clone MGC:1798 IMAGE:3506311), complete cds.
ACCESSION BC000006
VERSION BC000006.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1221)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1221)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000006.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: o Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49574487.
FEATURES Location/Qualifiers
source 1..1221
/db_xref="H-InvDB:HIT000029274"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1798 IMAGE:3506311"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1221
/gene="ATP1B1"
/gene_synonym="MGC1798"
/db_xref="GeneID:481"
/db_xref="HGNC:HGNC:804"
/db_xref="MIM:182330"
CDS 87..998
/gene="ATP1B1"
/gene_synonym="MGC1798"
/codon_start=1
/product="ATPase, Na+/K+ transporting, beta 1 polypeptide"
/protein_id="AAH00006.1"
/db_xref="GeneID:481"
/db_xref="HGNC:HGNC:804"
/db_xref="MIM:182330"
/translation="MARGKAKEEGSWKKFIWNSEKKEFLGRTGGSWFKILLFYVIFYG
CLAGIFIGTIQVMLLTISEFKPTYQDRVAPPGLTQIPQIQKTEISFRPNDPKSYEAYV
LNIVRFLEKYKDSAQRDDMIFEDCGDVPSEPKERGDFNHERGERKVCRFKLEWLGNCS
GLNDETYGYKEGKPCIIIKLNRVLGFKPKPPKNESLETYPVMKYNPNVLPVQCTGKRD
EDKDKVGNVEYFGLGNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNLTMDTEIRIEC
KAYGENIGYSEKDRFQGRFDVKIEVKS"
BASE COUNT 385 a 267 c 283 g 286 t
ORIGIN
1 agaagccgag cggcgcagag gacgccaggg cgcgcgccgc agccacccac cctccggacc
61 gcggcagctg ctgacccgcc atcgccatgg cccgcgggaa agccaaggag gagggcagct
121 ggaagaaatt catctggaac tcagagaaga aggagtttct gggcaggacc ggtggcagtt
181 ggtttaagat ccttctattc tacgtaatat tttatggctg cctggctggc atcttcatcg
241 gaaccatcca agtgatgctg ctcaccatca gtgaatttaa gcccacatat caggaccgag
301 tggccccgcc aggattaaca cagattcctc agatccagaa gactgaaatt tcctttcgtc
361 ctaatgatcc caagagctat gaggcatatg tactgaacat agttaggttc ctggaaaagt
421 acaaagattc agcccagagg gatgacatga tttttgaaga ttgtggcgat gtgcccagtg
481 aaccgaaaga acgaggagac tttaatcatg aacgaggaga gcgaaaggtc tgcagattca
541 agcttgaatg gctgggaaat tgctctggat taaatgatga aacttatggc tacaaagagg
601 gcaaaccgtg cattattata aagctcaacc gagttctagg cttcaaacct aagcctccca
661 agaatgagtc cttggagact tacccagtga tgaagtataa cccaaatgtc cttcccgttc
721 agtgcactgg caagcgagat gaagataagg ataaagttgg aaatgtggag tattttggac
781 tgggcaactc ccctggtttt cctctgcagt attatccgta ctatggcaaa ctcctgcagc
841 ccaaatacct gcagcccctg ctggccgtac agttcaccaa tcttaccatg gacactgaaa
901 ttcgcataga gtgtaaggcg tacggtgaga acattgggta cagtgagaaa gaccgttttc
961 agggacgttt tgatgtaaaa attgaagtta agagctgatc acaagcacaa atctttccca
1021 ctagccattt aataagttaa aaaaagatac aaaaacaaaa acctactagt cttgaacaaa
1081 ctgtcatacg tatgggacct acacttaatc tatatgcttt acactagctt tctgcattta
1141 ataggttaga atgtaaatta aagtgtagca atagcaacaa aatatttatt ctactgtaaa
1201 tgacaaaaaa aaaaaaaaaa a
//