LOCUS AP009843 10728 bp DNA linear PLN 19-AUG-2015
DEFINITION Lotus japonicus genomic DNA, chromosome 5, clone: LjT40M15,
TM1496a.
ACCESSION AP009843
VERSION AP009843.1
DBLINK BioProject:PRJDA28941
BioSample:SAMD00011082
KEYWORDS HTG.
SOURCE Lotus japonicus
ORGANISM Lotus japonicus
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae;
50 kb inversion clade; NPAAA clade; Hologalegina; robinioid clade;
Loteae; Lotus.
REFERENCE 1 (bases 1 to 10728)
AUTHORS Sato,S.
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Shusei Sato
Kazusa DNA Research Institute, Dept. of Plant Genome Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://www.kazusa.or.jp/
REFERENCE 2
AUTHORS Sato,S., Nakamura,Y., Kaneko,T., Asamizu,E., Kato,T., Nakao,M.,
Sasamoto,S., Watanabe,A., Ono,A., Kawashima,K., Fujishiro,T.,
Katoh,M., Kohara,M., Kishida,Y., Minami,C., Nakayama,S.,
Nakazaki,N., Shimizu,Y., Shinpo,S., Takahashi,C., Wada,T.,
Yamada,M., Ohmido,N., Hayashi,M., Fukui,K., Baba,T., Nakamichi,T.,
Mori,H. and Tabata,S.
TITLE Genome Structure of the Legume, Lotus japonicus
JOURNAL DNA Res. 15, 227-239 (2008)
COMMENT
FEATURES Location/Qualifiers
source 1..10728
/chromosome="5"
/clone="LjT40M15"
/clone_lib="LjT library"
/db_xref="taxon:34305"
/ecotype="MG-20"
/mol_type="genomic DNA"
/note="TM1496a, a part of TAC clone:TM1496"
/note="synonym: Lotus corniculatus var. japonicus"
/organism="Lotus japonicus"
BASE COUNT 3003 a 2246 c 2271 g 3208 t
ORIGIN
1 aagcttcaca tctcgaataa ttttcagtaa gaaaaatggc atcatacaga aaggtattag
61 aagagctcag aaggaaggcg tttgaggaag atatattcct caatattagg catcccgatg
121 gtacaaagac catacaagag cttacgaaga cactgcagga agaggatctt ggtccagaga
181 tggagaaaga tctgaaggag ttcctctgct tcgtggaaga gattcagagg ctttgccagc
241 gggagctgaa tctgctggaa gagaaggaga ctgtggaaaa gagacttaag acgacagaag
301 atagtctaga aaaagatgat ctgagcatca aactcggcaa catagagtat gcattggatc
361 gtctggagaa ggaaagagtg gagcagcgcc aagaatgcag aagaatgagg aaggatcctc
421 cattctagat atagggaata atgtatgatg taatgaacgt gagttatatg aataaaaaaa
481 tttgcaaaca catgttatat atatatgcaa tgagaaacaa cgagtaagca aaatataaca
541 aataatgcaa atatcttaaa taaaagtaaa ataagttaag aaagaaaaac gaaagaaatc
601 ctaaaaacta gggtttgtca gtgcgtctca gaagttccat catcatttgc ttcatctcaa
661 tcagcatgga ttcatgagtg tcaagacgtt gttccatgat gtcgagtctg gaagagcttg
721 tctgagtaga gctggaagga acattctgag cagcttgagg ttctggaatg gaagcagaag
781 cagcaggaga aaacacaact ggtgcaagtc gctctgcctc agcctcagct tcaagacgtt
841 ctgcctcaag tcgagcttgt tcagcctgag ctgctgcttg acgggcagct tcttcttctt
901 gttctttctg tctcttggct tcttcaatgg cgtcaagaag cttggttctc tgttcgagtt
961 catgaagagc caccctcctt gcaaaccttt gctttgcagc ctcaatgctc tgacttccct
1021 ctgcatgcag gagctgcagc ataacgggaa actgagccac cagccaagtg ctcaaattat
1081 tccactcatc agccacattt tcagcattct cactgaggtc agtctgaccg tgcacattgc
1141 ggagcctcaa ggaggcttca tgattgaaaa tattgatgca ctcagagaga gatgtgggtt
1201 gaaggtgagt atagggaatg atggagaggt tgggtgcagg agaggctggg tgattgctgc
1261 tatgagcttc agaggcacct tgtggagaac caatgttaat tatgggagca ttgggttcag
1321 aggttccacg gtgagggtct gaagtttcaa ccagagggtg aggtgatcta accgaggatt
1381 ggttagacac tgaatgttca ggttcaggtt ctggttgaat gggctcttgt tgaactaagg
1441 ggtctgcctc ttggatagga ttggccaaga taggttcatc aggatccact agacgttcag
1501 gtctagggcc aggatatctc ctagggcttg gacaggtaag gtaatgttct tctaaggcag
1561 ataccctttc ttttctcacc tccatgaatt ttctcatgtt ttcagaagta ttggagggag
1621 aagagtcaat agtattgatt gggaaggata caggtgtaaa ggcggttgag gagtctgtat
1681 ccgtgggtct gacagcagga cgttctgatg ctctgggagc agagtgatca gacgttctgg
1741 gttgtggttc tgttggtgtg ggttctggtt ggttttggat gttgggttca gaaagtaatg
1801 ggtcgtatgg aatggtaagg agagaggttg gatcttctga cctagagggt tggttctgaa
1861 gcaaattcca gagtggtgct tcagtaggag aaggttgaaa gaatgaagat cttggggaat
1921 gtggtggaga ggtggtttgt gcggctggct gggattcagg aataggagtg aggggatttg
1981 aagggtgttg gagtaaggca gaaattggga gtgcatcaaa taaattcaaa tcatcatcag
2041 aggtaagtgc aggcttactt ggatgtgctg atgatcgagt cactctggca ggagctacag
2101 tccttctgac ctctgcagca gctggttcca cccgagtagg cttcaccaca atcctgactt
2161 tcttctgctt cttcttggga ggaccatcct cactatcatc accatcatca tcatcaggct
2221 tgctcttcgc cttcttgacc agagggacat cagattcctc tgaggattcg tccagaacca
2281 tcttcctctt ggttttcttc ttgggaggag aaggaaactc tggtgctggt ggaagtttgc
2341 tgacaaactc atcaaggtca atctcgaatc cttgagccct gagatcttca acatagcatc
2401 tgatggcttc aggatggtct gcttgagtcc acagagggta gtcattcaga ggcattcttc
2461 ttcctctgat ctcagaagat gtgtcctcat gagcaggagc aatcttcttc tggactaagc
2521 ccatcttctt caaagagttg gcagtgaaga cgtcactgac aattgtgctc aagtcctctg
2581 tgcaaccagc atcgatcaaa tcttgcacca agtggctttc aatgagaaag tctgagagca
2641 gcctcccaaa agggatatat ttgatggctg acttgatgga ggcggtggtg cgagacttcc
2701 ggatgcattc cttcaagtag gaaaacagga agtagggaag gcagatcttc tccttgtctt
2761 gaatgaagaa cagcatcgcc ttctgattga agttgatgta gtctggagaa ctgccctttg
2821 gtcgttgatt gatgcagttg agcaggatct tgtgccagat tctgagtttg gggtgaagat
2881 ccatcacctt gtaactcgtc ttgcccggtt tgaaggtggt gtacagggcc ttgttgacga
2941 tgtccttggt tctgggtttc agcttcgatt ccgtcagtga gaaccgatac ccctgagcag
3001 tttctgcacc tagcagattc acgaaggact tctccgtgat gatgatcttc ctacccagta
3061 tgtaagaaac cacctgagtg tcatcacaat cagcgtgctt ccagaattcc tttactagct
3121 tctcatacac cggtcctcga agtcgattga agtagtttcc ccaaccttga gcttggactt
3181 caggacggag atcaaaccca tttgcagcca agttgtctag gttgaatctc cattctgcca
3241 ggacttggag ttcctcagga ggaaatacac agtgaacggc acagccccgt tctgcaatag
3301 gaacaatctc ctcttgagct tgagcttgtt cttgtgctgg gttctcagag ccccgttgac
3361 ccgttgccaa accgactacc atgtgaggga actgaggtgc atctgcagta gctctgctgg
3421 tttgtctcac catcttgaag aagttgaagt ttgaaggtag aagatgaagt ttgaaagatg
3481 aagagagatc gagagagaat tcgagagaaa ggcggttttg aaaagcagag agtgcgagag
3541 tgaaaaccgg aagtgtgaga gaacgtgtgt gtgtagtggg ttttatcaaa taaccgttgt
3601 tgattcaaaa agcactttaa gatcaacggt tgaaaattaa aggtagatag taacagtaaa
3661 atacacaatc acacacagga gataagcata tctacacgca atcataacag actgtcacac
3721 gggcacaagg aactatgcat cagaaattct gacgcacgtg ttgttgtctc agcttcagag
3781 tcagtaccag tgggcacaca cactctgatt gagttacctt ctggactaga catcttctga
3841 tcaagaagta tcatagtcag aggttctgat ctatcttcac tctggacaaa agtccatgtt
3901 tagatttttc agaataaaat taaatctatc ttcagctaag ggctttgtaa agatatctgc
3961 ccattgatgg tcagtatcaa caaacttcag aagaagtacg cccttctgca cataatctct
4021 aatgaagtga tactttacct caatgtgctt tgcccttgaa tgcaagatag gattcttgct
4081 caacgaaatt gcagcagtgt tatcacaata gattgggata ttgctctcaa ggatctgata
4141 atcctccagc tgatgtttca tccaaagcat atgagtgctg catattgctg ctgagatata
4201 ttctgcctct gcagttgata gagcaatggt tgattgcctc ttgcttgccc atgagactag
4261 attgcttccc agaaattgac aatttccaga agtacttttt ctctctgttc tatctccagc
4321 ataatcagca tcacaataac ctgaaagctt atactctgat gttttcttat acatcaagcc
4381 aaggttagtg gtgcctttca gataccttag gatcctctta acagcagtta agtgggtttc
4441 ccttggatct gattggaaac gagcacataa atgaacacta aataatatgt ctggcctaga
4501 tgcagttaag tacagaagtg aacctatcat gccacgatag agcttctgac atactttacc
4561 acttatatct tctttttcca gaatgcacgt tggatgcatt ggagtcttgg ccactgtaga
4621 ttccagcata ttgaacttct tcagaagttc cttagtgtac ttgctctgat ggatatatgt
4681 tccttctggt gtttgatcaa cttgtattcc cagaaagtac tttaattctc ccatcatact
4741 catctcaaat tcagcctgca tcatctcaga aaattctttg catagagatt gattagcaga
4801 accaaatata atatcatcaa cataaatttg cacaattaag atatcatctt tataagtctt
4861 gcaaaagaga gttgtatcta ctttacccct tacaaactca ttctccagaa ggaatgagct
4921 aagtctctca taccatgctc tgggagcttg cttcagaccg tagagtgatt tcttcaattt
4981 gaacacatgg tctggtttct tttcatcttc aaaacctggg ggttgatgaa catagacttc
5041 ctctgagata taaccattta ggaaggcact ctttacgtcc atctgatgta gaactatgtt
5101 gtgatttact gagaaagaaa tcaatagtct gattgcctcc agtcttgcta ctggagcaaa
5161 tgtttcagtg tagtctattc cttcctgctg gctgtagcct tgagcaacta gccttgcctt
5221 gtttctgact acatctcctt tctcatttag cttgtttctg aatacccatt tcgttccaat
5281 aacatggaca ttctcaggct tctttactaa gctccaaaca tcgttcttgg agaattgatt
5341 caattcttct tccatggcca gaatccaatc cttgtcctga agagcttcat ctatggactt
5401 gggttcaatt aaggacacca atcctttcag actcagcaag gtctcttcag agggtctgaa
5461 ggcagatctg gttctgactg gttcatcttt gttgcccaga atcaattcct taggatgagc
5521 tgcagtgatt ctgctcttct tcagagtttg tgagttagag ggaccagctt cttcctctgg
5581 ttcatcttcc tctggctcaa cttcctctgg agctttgcct ttgtcagaca cattaatgct
5641 taaatctgca aacttttcaa ctagctttga ctggtcagag tcaagcttat catcaaatct
5701 aacatgaata gattcttcaa tagtcttagc atcagtatta taaaatctaa aacctttaga
5761 tctatcagaa taaccaagta atagacactt agaagattta gcatcaaatt tatgcaatct
5821 atccttagta ttgagaacat aacaaacaca gccaaaagga tgaaaataag aaatgttggg
5881 ttttatgttc ttccacaatt cataaggagt cttattcaga attggtctca cagagattct
5941 gttctgaatg taacatgctg tatttactgc ctctgcccaa aagtgcttag ccatgccagt
6001 ttcttggagc atggttctag ccatctcctg aagagttctg ttcttcctct caacaacacc
6061 attttgttga ggagttctgg gacaagagaa atcatgtgca attccatagg aatcaaacag
6121 actctcaaac ttgtcattct caaactctcc accatggtca cttctgacac gcacaattct
6181 acaagccttc tcgttttgca cttgagcaat gaaggtagag aacacagcat gagactcatc
6241 cttgcgggtt agaaacttta cccatgtcca gcggctatag tcatcaacga taaccatccc
6301 atatctcttg ccacctatag actcagtttt cactggtcca aacaggtcga tatgcagaag
6361 ttccaacggc cttgaggttg agacaacatt ctttgccttg aaagggactt ttgtgaattt
6421 gcctttctga catgcttcac aaagagcgtc tgaagcgaac ttcagattgg gtaagcccct
6481 gacaaggttt agcttgctca gctgagaaat ctttctcata ctggcatgcc ctaaccgtct
6541 atgccatacc cactgctctt cattaacaga cagaaggcac ttcacattct gagcctccaa
6601 ctcagatagt ctgatcttgt aaatgttgtt cttcctcttg ctgttgaaca gaacagagcc
6661 atcgatctga cttacagccc ggcaggactt ttgattgaat ataacatcat aacccttgtc
6721 agctaattga cttatagaca ataagttatg tgttaagccg tctaccaata aaacattatc
6781 aatgcatgga ctactatcta cacaaatagt accagtacca ataattttac ccttttcatt
6841 tcctccaaag ccaacttcgc ctccaggctt aagtttcagc tctcggaaca tacgcttttc
6901 tcccgtcatg tgacgcgagc atccactgtc cagataccat gattggtgtt tcagtggagc
6961 tatcaaggat atctgcaaca tagataatct tgtccttagg tacccacttt ctgggtcctc
7021 ttttgttagt taccccaaag gttctgatca ccttgggtgt ctcaacatga tattttaaag
7081 gaatatttgc atgatattta gtcatagaga aagatccctt tttaagaggg tttttagcaa
7141 cttcagcagg tacaggatca ggcaatatgg taccagaggg aacaaagcat tcatacaagg
7201 atttagcttt agacacagaa ggctcatttc taattggttt agaatagcca atgccatgca
7261 ttccatttct gcttacacca tagatcattg aagccattaa gcttctatct acgcttttag
7321 ccaggaatct ttgaaaagat ttttcatact tagattcatg cttactatca gaggcatcgc
7381 aggcaataac ttcttctaac tttgcaattt gattcttaag cacagagtta gaattaacta
7441 aagcatggtt atcatttttc aaatcagata tgattttctc atgttcagaa ggagttttag
7501 aaacagcaga taagttcttt ttcagcttct tatgcttaga caacaaggag ttatacttat
7561 ccatgatatc agacaaagca tgtttcagtt cagaggtaga gaaggaagca aatacctcat
7621 tttcatcgtc agagtctgga tctccttctg attctgagtc agagtcaaca gcttcctttg
7681 actctgttcc tttgtctttg acaatagcca tgagtccttg gacttcacca tcagagtcaa
7741 catcctctga ctctgattca tcgaatgtca ccatcagact cttggtcttg aagtgcttct
7801 ttggcttctt gtccttcttc aattttggac agtcactttt gtagtgccct gattctttgc
7861 actcaaagca agtgacttcc ttgattgatg acttcttctg acctgaggat tcagactttc
7921 ctcttgcctt tccagagcct ttgaacttgc tctgcctgtg cttccagatg cggttgagtc
7981 tcttggagat cagagtcagc tcatcttcat cagaatcttc tgatgcttct tctgattctt
8041 cttcttcagc ttgaagagcc tttgacttct caaccttagc cttttcagat ttggatttca
8101 aggctatgga ctttttcctc agatcttgca tctctgagcg cttcagctca tggcatttca
8161 aaatgctgat gagttcttct aaactcatat tctcaacatc tctcgtgagc tctattgaag
8221 tcaccaaagg catccaactt tcaggaagac acctgatgac ccttatgacg tgatcttttg
8281 ttgtgtagct cttgttgaga ggacgtatgc cagctacaag cagttgaaat ctggagaaca
8341 tttcttcaat ggactcattt ggctccatga tgaaggattc atacttttgg atcaaagaca
8401 atgcctttga ttctttgact ttcttgtttc cttcatgaga catcttcaga gaatcaaaaa
8461 tgcctttagc aaactcacga tctgtaatct tctggtactc ctcataggag atagcactta
8521 gaagaattgc tcttgcttta tgatgttgtg agtacagctt cttttgatct gcagacatct
8581 ctgaccttgg gatctttttg ccatctgcat caactggacg ctcatagcca tccacaataa
8641 tatcccagag atctgcatcg aaacccagaa agaaactttc cagtctatct ttccaatatt
8701 cgaacctttg accatcgaac ataggaggct ttgcgttgta accatctctt tgagtttcac
8761 tggtggtggc agccattgtt tttcacaccg gcccggatca ctgaacactg ttaggtgtgg
8821 taatcagaac ttgcgctctg ataccaattg aaggtatgaa aaacggtaga aagggggggt
8881 ttgaataacg ttttcagtac aaaactacca ccttaaagat tttaacaagt cttttcgaga
8941 actaagtgca aaagatagag atagaaaagc acacaaggat tttatcctgg ttcacttgat
9001 aaatcactca agctactcca gtccacccgt taaggtgatt tcttccttct tagaatgaag
9061 gcaatccact aatcaggtaa gagttacaac tgcacttgaa acctacaagt gactaacaat
9121 tacactgact tagctcacac taagattcac tctcttagtc ttctctagga tccgatcaac
9181 cttgatctcc taaaggaact accactaaga ttcactctct tagtcttctt aaggatactg
9241 acctacccgg tcccttaagg aaaatcaaac aactgtttga ggttggtgtt tacaagggtt
9301 tgcttctgaa taagctgagt gtaaactaga taaattacaa gatgaaagaa agcttagaat
9361 atttgaatat cttgcgcgtg tgtattgctt ctcgtattca cttcacttct ctagccgctt
9421 ctttcaatct tcagcctcta tatatactcc aaggattagg gttgagcgtt gcatgggaaa
9481 tgctaccgtt ggagggcagt tctggaaaat ccagcttctg ctgtggctga gaacgttagg
9541 taggtcgtca ggaaggtaca cttgcttttg tacttggata gcgacttgac cttttaacct
9601 aggagacttc tgatcagagg aatgcttcgt attggaactt gtgaagccgg ttgatcagag
9661 tcagagggat agcacagatc ctctgaccat tgtatcttct gattctgaac tcagagggaa
9721 gaacatggcc ttcagagttt cttgcttctg gacttcagag tttctactat tcagcttctg
9781 gatcttcaga gtcttctaca ccatcagaac atctgaacct tcagtgtttc ttggttgtca
9841 gaacttctgg atcatcagag cttctagcga ctgagtcctc atcagagttt gtatagcttc
9901 agatcttctg aagcttttcc actgttcata ctgaacatgg tgaatgcgaa agcgttgctt
9961 gggttaccct ttatacacag tgcttctgat ttgtgtgaaa tagagtcagg gtcagagcct
10021 gtaaataaca cactcagaaa aacacgttag agtaccacaa ttgttcatat caaaaggtta
10081 acttgtaatc atcaaaacat agagttgtac tactagatca aaacttgatc ttacaccgcc
10141 aggaatcgat ccttgaacct ctccctactc aacacatatg tcttcagctc ctaccacttg
10201 agatattcta caggtaaata attattcatt gatgcaaact ctttattttt tttaaaacat
10261 tatcatatct ttaagattca aaagcattat ttaaagacga aattattatc ttcataatgc
10321 tatgattcca tgcacattaa atttattccc aaggtcaatt tttcctaatt atcatggcaa
10381 atctctagat taatttcctt agtttataaa caattttcta accataattc caaagcctag
10441 tcacacatac aacaacaaca acatggagga atagtttctt ttctttttca aagggtcaaa
10501 gcatagaaaa cctataaact aaattcaatt tttttaaagt aattgagcaa atacctctaa
10561 ggactttacg aaaaacaacg aagaatttga atatcctcta cttccaagca cccaaaggct
10621 ccaaccaaca agatcttcac aagagcaagc ttgaatcttc ctcaaggagg gagagagaga
10681 gagagagaga gagagagaga gagagagaga gagagagaga gagagaga
//