LOCUS Z21513 5508 bp mRNA linear ROD 21-OCT-2008 DEFINITION R.norvegicus integral membrane glycoprotein cDNA. ACCESSION Z21513 VERSION Z21513.1 KEYWORDS integral membrane glycoprotein. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 AUTHORS Hallberg E., Wozniak R.W., Blobel G. TITLE An integral membrane protein of the pore membrane domain of the nuclear envelope contains a nucleoporin-like region JOURNAL J. Cell Biol. 122(3), 513-521(1993). PUBMED 8335683 REFERENCE 2 (bases 1 to 5508) AUTHORS Hallberg E. JOURNAL Submitted (13-JAN-1993) to the INSDC. Einar Hallberg, Laboratory of Cell Biology, Rockefeller, University, 1230 York Avenue, New York, New York, NY10021, USA FEATURES Location/Qualifiers source 1..5508 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" CDS 6..3605 /product="integral membrane glycoprotein" /db_xref="GOA:P52591" /db_xref="InterPro:IPR026054" /db_xref="InterPro:IPR026090" /db_xref="PDB:4YI0" /db_xref="UniProtKB/Swiss-Prot:P52591" /protein_id="CAA79725.1" /translation="MSPAAAAADGGERRRPPLGVREGRGRTRGCGGPAGAAALGLALL GLALYLVPAAAALAWLAVGASAAWWGLSREPRGPRGLSSFVRESRRHPRPALTASPLP AKSPVNGSLCEPRSPLGGPDPAELLLMGSYLGKPGPPEPALPQDPRDRPGRRPPSRSP PSSSTAQRVHHVYPALPTPLLRPSRRPPHRDCGPLSSRFVITPRRRYPIQQAQYSLLG ALPTVCWNGGHKKAVLSARNSRMVCSPVTVRIAPPDSKLFRSPMPEQILSTTLSSPSS NAPDPCAKETVLNALKEKKKRTVAEEDQLHLDGQENKRRRHDSSGSGHSAFEPLVANG VPAAFVPKPGSLKRSLASQSSDDHLNKRSRTSSVSSLTSTCTGGIPSSSRNAITSSYS STRGVSQLWKRSGPTSSPFSSPASSRSQTPERPAKKTREEEPCHQSSSSAPLVTDKES PGEKVTDPATGKQQSLWTSPPTPGSSGQRKRKIQLLPSRRGDQLTLPPPPELGYSITA EDLDMERRASLQWFNKVLEDKTDDASTPATDTSPATSPPFTLTLPTVGPAASPASLPA PSSNPLLESLKKMQESPAPSSSEPPEAATVAAPSPPKTPSLLAPLVSPLTGPLASTSS DSKPTTTFLGLASASSATPLTDTKAPGVSQAQLCVSTPAATAPSPTPASTLFGMLSPP ASSSSLATPGPACASPMFKPIFPATPKSESDNPLPTSSSAATTTPASTALPTTATATA HTFKPIFESVEPFAAMPLSPPFSLKQTTAPATTAATSAPLLTGLGTATSTVATGTTAS ASKPVFGFGVTTAASTASTIASTSQSILFGGAPPVTASSSAPALASIFQFGKPLAPAA SVAGTSFSQSLASSAQTAASNSSGGFSGFGGTLTTSTSAPATTSQPTLTFSNTVTPTF NIPFSASAKPALPTYPGANSQPTFGATDGATKPALAPSFGSSFTFGNSVASAPSAAPA PAAFGGAAQPAFGGLKASASTFGTPASTQPAFGSTTSVFSFGSATTSGFGAAAATTQT THSGSSSSLFGSSTPSPFTFGGSAAPAGGGGFGLSATPGTGSTSGTFSFGSGQSGTTG TTTSFGGSLSQNTLGAPSQSSPFAFSVGSTPESKPVFGGTSTPTFGQSAPAPGVGTTG SSLSFGAPSTPAQGFVGVGPFGSGAPSFSIGAGSKTPGARQRLQARRQHTRKK" BASE COUNT 1100 a 1807 c 1397 g 1204 t ORIGIN 1 ccgcgatgtc tccggcggct gcggcggctg acggaggcga gcggcggcgg cctccgttgg 61 gcgtacggga aggccggggc cggacccgcg gctgcggagg accagcgggt gccgcggcac 121 tgggcctagc gctgctcggc ctcgcgctct acctagtgcc cgcggcggcc gcgctggcct 181 ggctggccgt gggggcgagc gcggcctggt ggggcctgag ccgagaaccc cgcggcccga 241 ggggcctgtc gtcgttcgtg cgcgagtcgc gccgtcaccc gcggcccgcg ctcaccgctt 301 caccgcttcc agccaagtcg ccagtcaacg gtagcctctg cgaaccccgc agcccgcttg 361 gaggccccga ccccgctgaa ctcttactca tgggcagcta cctgggcaag ccaggcccgc 421 cggagcctgc cctcccgcag gaccctagag acaggccagg gcgccgccca ccctcacggt 481 ccccgccgtc gtcttcgacg gcccagcgag tccaccacgt ctaccccgcg ctccccaccc 541 cacttttgcg accttctcgg aggccgcccc accgagattg tgggccttta tccagtcggt 601 ttgttataac accccgaaga cgatatccca ttcagcaagc ccagtattcc ttgctggggg 661 cacttccaac cgtatgctgg aatggtggcc ataagaaagc cgtgctatct gcacggaact 721 cgaggatggt gtgcagccca gtgacagtga ggattgcccc tccagacagc aagctatttc 781 gatcaccaat gccggagcag atactcagca ccacactgtc ttcaccatca agtaatgccc 841 cagacccttg tgcaaaggag acggtgctga atgccctcaa ggaaaagaag aaaaggacag 901 tggcagagga agaccagctg catcttgatg gccaggaaaa caagagaaga cgccacgata 961 gcagtgggag tggacattcg gcattcgagc cccttgtggc caacggagtc cctgctgcat 1021 ttgtgcctaa gcctggctcc ctgaagagaa gtctggcttc ccagagctcg gatgaccact 1081 tgaacaaacg gtctcgcacc tcctctgtga gctccctgac tagcacatgc acaggaggca 1141 tccccagctc cagccgcaac gccatcacca gctcctacag ctccacccga ggtgtctcac 1201 agctgtggaa gaggagtggt cccacctctt ctcccttctc cagcccagct tcctcccgct 1261 cccagacacc agagaggcca gccaagaaga caagagagga ggaaccatgt caccagtcca 1321 gttcttcagc tcccttggtg acagacaagg agtccccagg agaaaaggtt acagatccag 1381 ccacggggaa gcagcagagc ctgtggactt ccccacccac acctggcagc tccgggcaac 1441 gcaaacgcaa gattcagctg ctgccctccc ggcgagggga ccagctcacc ttgcctccac 1501 cccctgagct tggctattcc atcactgctg aagacctgga catggagagg agagcctcac 1561 tgcagtggtt taacaaggtc ttggaggata agacggatga tgcctctacc ccagccactg 1621 acacctcccc agccaccagc cctcccttca cactcaccct gcctaccgtg gggcctgctg 1681 cctcaccagc ctccctccca gctcccagct ctaacccact gttggagagt ttgaagaaga 1741 tgcaggagtc tccagcccca tcctcctcag aacctcctga ggcagcaaca gttgcggccc 1801 cttcacctcc gaagacacct agcctcctgg cccctcttgt ctcaccactg acagggcccc 1861 tagccagcac ctcctcagac tccaaaccta caaccacctt cctggggctg gcttctgctt 1921 catccgccac accactcact gacaccaagg cccctggagt ctctcaggcc cagctgtgtg 1981 tcagcacccc agccgccaca gctccctccc caactccagc cagcacgctg tttgggatgc 2041 tgagtccacc tgccagctcc tcttcccttg ccactcctgg cccagcttgc gcttctccca 2101 tgtttaagcc cattttcccg gccacaccta agagtgagag tgataatccc ttgccaacta 2161 gctcctcagc cgccacgaca actccagcca gcaccgccct ccccacaaca gcaaccgcca 2221 cagctcacac tttcaagccc atttttgaga gcgtggagcc atttgcagcc atgcccctgt 2281 cacctccctt ctccctgaag cagacaactg ctccagccac cactgcagcc acatcagctc 2341 ctctcctcac tggcctgggc actgccactt ccacagtggc cactggcacc acagcttctg 2401 cctccaagcc tgtgtttggc tttggagtga ccactgcagc gagcactgcc agtaccatag 2461 cttccacctc ccagtcaatt ctgtttgggg gagccccgcc tgttactgct tccagttccg 2521 ccccagccct ggcctccatc ttccaatttg gcaagcccct tgccccagca gcgtctgtgg 2581 cgggcacctc ctttagccag tcccttgcca gctctgccca gactgctgcc agcaatagta 2641 gtgggggctt cagtggtttt ggtgggaccc tcaccacctc cacctctgcc cctgccacca 2701 ccagccagcc cactctgacc ttcagcaaca ctgtcacccc caccttcaac attcccttta 2761 gcgccagtgc caagcctgcg ctcccaacct accccggagc caactcacag cccacatttg 2821 gagccactga tggggccacc aagccggcac ttgccccaag ttttggcagc tctttcactt 2881 ttggcaactc tgtggcctca gccccgtcgg cagccccagc accagccgcc tttggtggtg 2941 ctgcacagcc agctttcgga gggttgaaag cctcagcctc caccttcggc acccctgcca 3001 gcactcagcc ggctttcggt agcaccacct ccgtgttctc ctttggttca gccaccacat 3061 ctggctttgg tgctgctgcc gccaccacac agaccaccca cagtgggagc agcagctctc 3121 tgtttggcag ctctactcca tccccattca cattcggtgg ctcagcagct cctgctggtg 3181 gtggaggctt tgggcttagt gctacaccag gtaccggctc cacctctgga acttttagct 3241 ttggatctgg acagagcggg accacgggca ccaccacctc ctttggggga agtctgagtc 3301 agaacaccct gggcgcacct agccagagct caccgttcgc cttcagtgtg ggcagtacac 3361 ctgaaagcaa gcctgtgttt ggaggcacat ccacacctac ttttgggcag agtgcccctg 3421 ccccaggagt cggcaccaca ggcagcagcc tctcatttgg ggccccttca acacctgccc 3481 aaggctttgt tggagttgga cctttcggat caggagcccc ttccttttcc attggcgcgg 3541 gatccaagac cccaggggct cgacagcgac ttcaggcccg aaggcagcac acccgcaaga 3601 agtagcctgc ctgcctgcct gcctgcctgc acccccaccc ctgcctggac ctggacctca 3661 gcacctgcta ggaagagcct ctgaccctgc aaatcccata gcaaacccag ccgtcaccag 3721 ggtggaagtc tggccctttc tgttctagag gaagcgagtg ccccggggag cgaggtttac 3781 ttgaacagtc acactggtta ggctggagaa ctgaaaaaaa acatctgtac atattgtcct 3841 cttgctgccc cagcgcttgt ttagtgtata acctaggcag cccccctctc cttgggcacc 3901 attctgctgg cacccacttg gatccctaat acatgaggtg ggattggggg aaacggaatg 3961 tccctagctt tgcctgcttg gcttggccat gagtggttct cttcctctga tcccctcagg 4021 gtctctccct atttcttgct gctttgtcct tcaccggtcc tctgtgagat tcattccttt 4081 taaatggcgg tgaatcttgc tttgccttgg agaccccagt ggcgctgttt tgcctcttct 4141 gtcaagtctg tttagtctcc agccctctgc taacccagcc tctcaaaagg ttggtggctc 4201 aagactgtta gcctggcaga gccagggaga agtctgctcc aggaggtcct ggggcaggca 4261 gaccagaccg ccccccactg cttctagctg cctcttcacc tgcccgccac cccacgggcc 4321 aacttgcctc tttgggattg tattttccaa gccttgtact gtgtttgtct gatgttaatg 4381 tgtgttgctc cttgaatcga gtttggagga agaattgaat tgtatgtgtg gcggcatgtt 4441 ggtaatgccg gacttaatgt cacctgggcc tcctgggcct agctaattga atgctgaagt 4501 ggcaccgcca cagtgacagc cacagtgctg actcctgaat ctcaatagtg tttgactaag 4561 ggctggcagc ccaggggatg gatggagccg gctgggagca gacttccctc tctgttggtc 4621 ctccccatac agcccacccc aggccagggc ggcttctgcc tgtgcttgga gctgtagata 4681 accaactaca ctttgagttc ttagttgtat ttccaaaagg gtcctaccta gcctgtctct 4741 ccttccaaag ccacaccaca cccttaggcc caagcctggc tgccatgtcc gccctctttg 4801 ggagaagtat gaatgcgtgt gtctaaatta aaagaaaaaa tatttaaaca ttttttaaca 4861 aaataaaaat ttatttttgt atttaagcta aattgccttt taaattcctt caagcttggt 4921 tcactgaggt ggttaagtat aaatgctatg gaatagtagg aattagctgt atagttatgc 4981 ctgtgtgaag gaagggctca tagctgtccc cagcagctct cctgaggggg cagagctcct 5041 tctagacatg tcgtgtaagt gtaactctta ttttataaac agtgtgatgt agctgtaact 5101 ggtccccttt ccttgtgagt gggattgaat gttttatggc aggggttagg ctgggttgta 5161 tggaactgga gaagagctgg acctcaagtc ccaaatgcct gtgaggatgg ggatgggtgg 5221 gggtctgaac acgaaccctc tacctgtgcc tcaggtaagg aagggcctcc ctccaattca 5281 gtctgagcta attacctcag ctccacagca ggcctgtatc cagggtgccg gaagaggtgt 5341 cctggaatag cctcggtgtg tgagcacatc tgtccgtcgt cacgctggac agggacaggg 5401 aggctggggc ttccaccaca gactgcgttt ctgtgagtgt agctgagatt tttagtatga 5461 atgtgagatt gttcttgctt atgtcattaa aaataaaact gtgatctg //