LOCUS Y08992 4824 bp DNA linear BCT 18-APR-2005 DEFINITION E.agglomerans pKLH272 incomplete unit of mosaic mercury resistance transposon. ACCESSION Y08992 VERSION Y08992.1 KEYWORDS merA gene; merC gene; mercuric ion reductase; mercuric ion transport protein; merD gene; merE gene; merP gene; merR gene; merT gene; periplasmic mercuric ion binding protein; resolvase; resolvase binding site I; resolvase binding site II; resolvase binding site III; tnpR gene. SOURCE Pantoea agglomerans ORGANISM Pantoea agglomerans Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group. REFERENCE 2 (bases 1 to 4824) AUTHORS Kholodii G. JOURNAL Submitted (23-OCT-1996) to the INSDC. G. Kholodii, Institute of Molecular Genetics, Russian Academy of Sciences, Kurchatov Square, Moscow 123182, RUSSIA REFERENCE 3 (bases 1 to 4824) AUTHORS Yurieva O., Kholodii G., Minakhin L., Gorlenko Z., Kalyaeva E., Mindlin S., Nikiforov V. TITLE Intercontinental spread of promiscuous mercury-resistance transposons in environmental bacteria JOURNAL Mol. Microbiol. 24(2), 321-329(1997). PUBMED 9159519 FEATURES Location/Qualifiers source 1..4824 /organism="Pantoea agglomerans" /strain="KH72" /mol_type="genomic DNA" /note="isolated from intestine of house mouse (Mus musculus) which inhabited the Khaidarkan mercury mine (Kirgizia, Central Asia)" /db_xref="taxon:549" source 1..131 /organism="Pantoea agglomerans" /plasmid="pKLH272" /strain="KH72" /mol_type="genomic DNA" /db_xref="taxon:549" mobile_element 132..4665 /mobile_element_type="transposon:mosaic mercury resistance transposon" /note="incomplete unit" repeat_region 132..169 /rpt_type=LONG_TERMINAL_REPEAT /note=" Tn21-like terminal repeat" misc_feature 132..858 /note="sequence of pKLH2 type" CDS complement(165..620) /transl_table=11 /gene="merR" /product="activator/repressor" /db_xref="GOA:Q799X9" /db_xref="InterPro:IPR000551" /db_xref="InterPro:IPR009061" /db_xref="InterPro:IPR011794" /db_xref="InterPro:IPR015358" /db_xref="UniProtKB/TrEMBL:Q799X9" /protein_id="CAA70185.1" /translation="MQINFENLTIGVFAKAAGVNVETIRFYQRKGLLPEPDKPYGSIR RYGEADVTRVRFVKSAQRLGFSLDEIAELLRLEDGTHCEEASGLAEHKLKDVREKMAD LARMEAVLSELVCACHARKGNVSCPLIASLQDGTKLAASARGSHGVTTP" CDS 692..1072 /transl_table=11 /gene="merT" /product="mercuric ion transport protein" /db_xref="GOA:P94700" /db_xref="InterPro:IPR003457" /db_xref="UniProtKB/Swiss-Prot:P94700" /protein_id="CAA70186.1" /translation="MSEPQKSEPQKSEPQNGRGALFAGGLAAILASACCLGPLVLIAL GFSGAWIGNLTVLEPYRPIFIGAALVALFFAWRRIYRPAQACKPGEVCAIPQVRATYK LIFWIVAALVLVSLGFPYVMPFFY" repeat_region 694..738 /note="triplication of 15 bp" misc_feature 859..1170 /note="mer sequence of a novel (pMER610) type" CDS 1088..1363 /transl_table=11 /gene="merP" /product="periplasmic mercuric ion binding protein" /db_xref="GOA:P0A217" /db_xref="InterPro:IPR001802" /db_xref="InterPro:IPR006121" /db_xref="InterPro:IPR011795" /db_xref="InterPro:IPR017969" /db_xref="InterPro:IPR036163" /db_xref="UniProtKB/Swiss-Prot:P0A217" /protein_id="CAA70182.1" /translation="MKKLFAALALAAVVAPVWAATQTVTLSVPGMTCASCPITVKHAL SKVEGVSKTDVSFDKRQAVVTFDDAKTNVQKLTKATEDAGYPSSLKR" misc_feature 1171..2177 /note="mer sequence of pKLH2 type" CDS 1391..1816 /transl_table=11 /gene="merC gene" /product="MerC protein" /db_xref="GOA:Q799X8" /db_xref="InterPro:IPR004891" /db_xref="UniProtKB/TrEMBL:Q799X8" /protein_id="CAA70183.1" /translation="MGLITRIAGKTGALGSVVSAMGCAACFPAIASFGAAIGLGFLSQ YEGLFIGILLPMFAGIALLANAIAWLNHRQWRRTALGTIGPILVLAAVFLMRAYGWQS GGLLYVGLALMVGVSVWDFISPAHRRCGPDSCELPEQRG" CDS 1855..3540 /transl_table=11 /gene="merA" /product="mercuric ion reductase" /db_xref="GOA:P94702" /db_xref="InterPro:IPR001100" /db_xref="InterPro:IPR004099" /db_xref="InterPro:IPR006121" /db_xref="InterPro:IPR012999" /db_xref="InterPro:IPR016156" /db_xref="InterPro:IPR017969" /db_xref="InterPro:IPR021179" /db_xref="InterPro:IPR023753" /db_xref="InterPro:IPR036163" /db_xref="InterPro:IPR036188" /db_xref="UniProtKB/Swiss-Prot:P94702" /protein_id="CAA70184.1" /translation="MTTLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAI EAGTSSDALTTAVAGLGYEATLADAPPTDNRAGLLDKMRGWIGAADKPSGNERPLQVV VIGSGGAAMAAALKAVEQGAQVTLIERGTIGGTCVNVGCVPSKIMIRVAHIAHLRRES PFDGGMPPTSPTILRERLLAQQQARVEELRHAKYEGILDGNSAITVLHGEARFKDDQS LIVSLNEGGERVVMFDRCLVATGASPAVPPIPGLKESPYWTSTEALASDTIPERLAVI GSSVVALELAQAFARLGSKVTALARNTLFFREDPAIGEAVTAAFRAEGIEVLEHTQAS QVAHMDGEFVLTTTHGELRADKLLVATGRTPNTRSLALEAAGVAVNAQGAIVIDKGMR TSSPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALDLTAMPAVVFTDPQVATV GYSEAEAHHDGIETDSRLLTLDNVPRALANFDTRGFIKLVIEEGSGRLIGVQAVAPEA GELIQTAVLAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFSKDVKQLSCCAG" misc_feature 2178..2518 /note="mer sequence of a novel (Tn5036/pKLH272) type" misc_feature 2519..2921 /note="mer sequence of Tn501 type" misc_feature 2922..3270 /note="mer sequence of a novel (Tn5036/pKLH272) type" misc_feature 3271..4665 /note="sequence of pKLH2 type" CDS 3558..3923 /transl_table=11 /gene="merD" /product="MerD protein" /db_xref="GOA:P0A2Q7" /db_xref="InterPro:IPR000551" /db_xref="InterPro:IPR009061" /db_xref="InterPro:IPR011797" /db_xref="UniProtKB/Swiss-Prot:P0A2Q7" /protein_id="CAA70178.1" /translation="MSAYTVSRLALDAGVSVHIVRDYLLRGLLRPVAYTTGGYGLFDD TALQRLRFVRAAFEAGIGLDALARLCRALDAADGDGASAQLAVLRQLVERRREALASL EMQLAAMPTEPAQHAESLP" CDS 3920..4156 /transl_table=11 /gene="urf-1 (merE)" /product="Urf-1 (MerE)" /db_xref="GOA:Q799X7" /db_xref="InterPro:IPR007746" /db_xref="UniProtKB/TrEMBL:Q799X7" /protein_id="CAA70179.1" /translation="MNSPEHLPSETHKPITGYLWGALAVLTCPCHLPILAIVLAGTTA GAFIGEHWGIAALTLTGLFVLSVTRLLRAFKGRS" CDS 4153..4191 /transl_table=11 /gene="urf-2X" /product="URF-2X protein" /db_xref="UniProtKB/TrEMBL:Q799X6" /protein_id="CAA70180.1" /translation="MTASQPAESGQL" CDS 4222..4434 /transl_table=11 /gene="urf-2Y" /product="Urf-2Y protein" /db_xref="InterPro:IPR021767" /db_xref="UniProtKB/TrEMBL:Q799X5" /protein_id="CAA70181.1" /translation="MNANAPNTASCTTCCVCCKEIPLDAAFTPEGAEYVEHFCGLDCY ERFQARAKAATESDIAPVPGGSQPSD" misc_feature 4424..4453 /note="put. site resI" misc_feature 4475..4509 /note="put. site resII" misc_feature 4515..4543 /note="put. site resIII" CDS 4564..>4665 /transl_table=11 /gene="tnpR" /product="resolvase" /db_xref="GOA:O07024" /db_xref="InterPro:IPR006118" /db_xref="InterPro:IPR006119" /db_xref="InterPro:IPR036162" /db_xref="UniProtKB/TrEMBL:O07024" /protein_id="CAA70177.1" /translation="MQGQRIGYVRVSSFDQNPDRQLEQIEVGKVFTDK" mobile_element 4666..>4824 /mobile_element_type="insertion sequence:IS26 homologue" repeat_region 4666..4679 /rpt_type=LONG_TERMINAL_REPEAT /note="terminal repeat of IS26 homologue" BASE COUNT 949 a 1490 c 1453 g 932 t ORIGIN 1 ctgccgggct tataacatag gtcccgacca tgagccggcg tggcaactgc tgggataatg 61 cggtggccga atcgttcttc agttcactga aaagagcgca tcaggaagag aatatacaaa 121 acccgggatc tggggtcgtc tcagaattcg gaaaataaag cacgctaagg cgtagtcacc 181 ccgtgactcc cccgcgccga tgcagcgagc ttcgttccgt cttgcagtga cgcaatcagc 241 gggcaggaaa cgttcccttt ccgcgcatgg caggcgcaca ccagttcaga cagcacggcc 301 tccatgcgtg ccaagtcggc catcttctcg cgcacatcct tgagcttgtg ctcggccagg 361 ccgctggctt cctcgcaatg ggtgccatcc tccagccgca gtagctcggc gatttcgtcc 421 aggctaaagc ccagccgctg ggccgatttc acgaaccgca ctcgtgttac atccgcctcg 481 ccatagcggc gaatgctgcc atagggcttg tctggctccg gcagcaggcc cttgcgctgg 541 tagaaccgga tggtctccac attgaccccg gccgccttgg caaaaacgcc aatggtcaga 601 ttctcaaaat taatttgcat atcgcttgac tccgtacata actacggaag taagcttaag 661 ctatccaaac caaatttgaa aggacaagcg tatgtctgaa ccacaaaagt ctgaaccaca 721 aaagtctgaa ccacaaaacg ggcgcggcgc gctcttcgcc ggtgggctgg ccgccattct 781 tgcgtcggcc tgctgcctgg ggccgctggt tttgatcgcc ttggggttca gcggggcatg 841 gatcggcaac ctgacggtgc tggaacccta tcgcccgatc ttcatcggcg cagcgctggt 901 cgcgctgttt ttcgcctggc ggcgcatcta ccgcccggcg caagcctgca aaccgggtga 961 ggtctgcgcg attccccaag tgcgagctac ttacaagctc attttctgga tcgtggccgc 1021 gctggtcctg gtctcgctcg gatttcccta cgtcatgcca tttttctatt aatcacagga 1081 gttcatcatg aaaaaactgt ttgccgccct cgccctcgcc gccgttgttg cccccgtgtg 1141 ggccgccacc cagaccgtca cgctgtccgt gcctggcatg acctgcgcct cttgcccgat 1201 cactgtcaag cacgcgcttt ccaaggttga gggcgtgagc aagaccgacg taagtttcga 1261 caagcgccag gccgtcgtca ccttcgacga tgccaagacc aacgtccaga agttgaccaa 1321 ggcgaccgag gacgcgggct atccgtccag cctcaaacgc tgatccgtta accgaactcg 1381 ggagcgacac atgggactca tcacgcgcat cgctggcaaa accggcgcgc tcggcagcgt 1441 cgtttccgcg atgggctgcg ccgcctgttt tcctgccatc gccagctttg gcgcggccat 1501 cggactgggc ttcttgagcc agtacgaggg gctattcatt ggcatcctgc tgccgatgtt 1561 cgccggcatc gcgttactcg ccaatgctat cgcttggctc aatcatcgac agtggcgacg 1621 cacggcgctc ggcacgatag gcccgatctt ggtgctggca gcggtgtttt taatgcgggc 1681 ttacggctgg cagagcggtg gactgctcta tgtcggcctg gccttgatgg ttggggtgtc 1741 ggtctgggat ttcatctcgc cagcacatcg ccgctgcggg ccggacagct gtgaattgcc 1801 agaacaacgt ggctgacggc aacagccgta gccaccacag aaaaggaaaa atacatgacc 1861 accctgaaaa tcaccgggat gacctgcgac tcgtgcgcgg ctcacgtcaa ggaagccttg 1921 gagaaagtgc ccggcgtgca atcggcgctg gtgtcctatc cgaagggcac agcgcaactc 1981 gccattgagg cgggcacgtc atcggatgcg ctgactaccg ccgtggccgg actgggctac 2041 gaggcaacgc ttgccgatgc gccaccgacg gacaaccgcg ccggcctgct cgacaagatg 2101 cgcggctgga taggggccgc tgataagccc agtggcaacg aacgcccgtt gcaggtcgtc 2161 gtcattggta gcggtggagc cgcgatggcg gcagcactga aggccgtcga gcaaggcgcg 2221 caggtcacgc tgattgagcg cggcaccatc ggcggcacct gcgtcaacgt cggttgtgtg 2281 ccgtccaaga tcatgatccg cgtcgcccac atcgcccatc tgcgccggga aagcccattc 2341 gacggcggca tgccacccac atcgccgacg atcttgcgcg agcggctgct ggcccagcag 2401 caggcccgtg tcgaagaact ccgtcatgcc aagtacgaag gcatcctgga cggcaattca 2461 gccatcaccg ttctgcacgg tgaagcgcgt ttcaaggacg accagagcct tatcgttagt 2521 ttgaacgagg gtggcgagcg cgtcgtgatg ttcgaccgct gcctggtcgc cacgggtgcc 2581 agcccggcgg tcccgccgat tccgggcttg aaagagtcac cctactggac ttccaccgag 2641 gccctggcga gcgacaccat tcccgaacgc cttgccgtaa tcggctcgtc ggtggtggcg 2701 ctggagctgg cgcaagcctt tgcccggctg ggcagcaagg tcacggccct ggcgcgcaat 2761 accttgttct tccgtgaaga cccggccatc ggcgaggcgg tgacagccgc tttccgtgcc 2821 gagggcatcg aggtgctgga gcacacgcaa gccagccagg tcgcccatat ggacggtgaa 2881 ttcgtgctga ccaccacgca cggtgaattg cgcgccgaca agctgctggt cgccaccggc 2941 cggacaccga acacgcgcag cctggcattg gaagcggcgg gggtagccgt caatgcgcag 3001 ggggccatcg tcatcgacaa gggcatgcgc accagtagcc cgaacatcta cgcggccggc 3061 gactgcaccg accagccgca gttcgtctat gtggcggcag cggccggcac tcgtgcggcg 3121 atcaacatga ctggcggcga tgcggccctg gacctgaccg caatgccggc cgtggtgttc 3181 accgacccgc aggtcgccac cgtgggctac agcgaggcgg aagcacatca cgacgggatc 3241 gagaccgaca gtcgcctgct aacactggat aacgtgccgc gtgcgcttgc caacttcgac 3301 acacgcggct tcatcaagct ggtcatcgag gaaggtagcg gacggctcat cggcgtgcaa 3361 gcggtggccc cggaagcggg tgaactgatc cagacggcgg tgctcgccat tcgcaaccgt 3421 atgaccgtgc aggaactggc cgaccaattg ttcccctacc tgaccatggt cgaagggctg 3481 aagctcgcgg cgcagacctt cagcaaggac gtgaagcagc tttcgtgctg cgccggatga 3541 ggaaaaggag gtgttcaatg agcgcctaca cagtgtcccg gctggccctt gatgccgggg 3601 tgagcgtgca tatcgtgcgc gactacctgc tgcgcggatt gctacggccg gtcgcgtaca 3661 ccacgggcgg ctacggcttg ttcgatgaca ccgcgttgca acggctgcgc tttgtacggg 3721 ctgccttcga agcgggtatc ggcctggacg cactggcgcg gctgtgccgg gcgctggatg 3781 ctgcggacgg tgacggtgcg tctgcgcagc ttgccgtgtt gcggcaactc gtcgagcgtc 3841 ggcgcgaggc cctggccagc ctcgaaatgc aactggccgc catgccaacc gaaccggcac 3901 agcacgcgga gagtctgcca tgaacagccc agagcacttg ccgtctgaga cgcacaaacc 3961 gatcaccggc tacttgtggg gcgcgctggc cgtgctcacc tgtccctgcc atttgccgat 4021 tctcgccatt gtgctagccg gcacgacggc cggcgcgttc atcggggagc actggggtat 4081 tgcagccctc acgctgaccg gcttgtttgt cctgtctgtg acgcggctgc tgcgggcctt 4141 caagggaaga tcatgaccgc ttcccagcca gccgagagtg ggcagctttg agcttcgcta 4201 ccaatctgga ggagtaccac catgaacgca aacgccccga acactgccag ttgcaccacc 4261 tgctgcgtat gctgcaaaga aattccgctc gatgccgcct tcaccccgga aggcgcggaa 4321 tacgtcgaac atttctgcgg gctggattgc tatgaacgct tccaggcacg cgccaaggcc 4381 gcgacagaat ctgacattgc gcctgtccct ggcggttcgc agccgtcaga ttgaggcata 4441 ccctaacctg atgtcagatg ttgagcacaa acaacgtcag agtagggtat taatttatat 4501 ttattgacac attcagccaa gggtaataga tttcatcctg acatttttac ctttggaggc 4561 atcttgcaag gtcaacgtat cggctacgtt cgcgtcagca gcttcgacca gaatcctgat 4621 cgacaactgg aacaaataga agtcggcaag gtattcaccg ataagggcac tgttgcaaat 4681 agtcggtggt gataaactta tcatcccctt ttgctgatgg agctgcacat gaacccattc 4741 aaaggccggc attttcagcg tgacatcatt ctgtgggccg tacgctggta ctgcaaatac 4801 ggcatcagtt accgtgagct gcag //