LOCUS X79047 7501 bp RNA linear VRL 18-APR-2005 DEFINITION Echovirus type 12, prototype Travis wild type genome. ACCESSION X79047 VERSION X79047.1 KEYWORDS P2 gene; P2-A gene; P2-B gene; P2-C gene; P3 gene; VP1 gene; VP2 gene; VP3 gene; VP4 gene; VPg gene. SOURCE Echovirus E12 ORGANISM Echovirus E12 Viruses; Riboviria; Picornavirales; Picornaviridae; Enterovirus; Enterovirus B. REFERENCE 2 AUTHORS Kraus W. JOURNAL Submitted (14-FEB-1994) to the INSDC. W. Kraus, Institut fuer Virologie, Fuerst-Pueckler-Str. 56, 50935 Koeln, FRG REMARK revised by [4] REFERENCE 3 (bases 1 to 7500) AUTHORS Kraus W., Zimmermann H., Zimmermann A., Eggers HJ., Nelsen-Salz B. TITLE Infectious cDNA clones of echovirus 12 and a variant resistant against the uncoating inhibitor rhodanine differ in seven amino acids JOURNAL J. Virol. 69(9), 5853-5858(1995). PUBMED 7637032 REFERENCE 4 (bases 1 to 7501) AUTHORS Kraus W. JOURNAL Submitted (24-APR-1997) to the INSDC. W. Kraus, Institut fuer Virologie, Fuerst-Pueckler-Str. 56, 50935 Koeln, FRG FEATURES Location/Qualifiers source 1..7501 /organism="Echovirus E12" /sub_species="prototype Travis" /isolate="wildtype" /mol_type="genomic RNA" /db_xref="taxon:35293" mat_peptide 742..949 /gene="VP4" CDS 742..7323 /note="Echovirus 12 polyprotein" /db_xref="GOA:Q66575" /db_xref="InterPro:IPR000081" /db_xref="InterPro:IPR000199" /db_xref="InterPro:IPR000605" /db_xref="InterPro:IPR001205" /db_xref="InterPro:IPR001676" /db_xref="InterPro:IPR002527" /db_xref="InterPro:IPR003138" /db_xref="InterPro:IPR003593" /db_xref="InterPro:IPR007094" /db_xref="InterPro:IPR009003" /db_xref="InterPro:IPR014759" /db_xref="InterPro:IPR014838" /db_xref="InterPro:IPR027417" /db_xref="InterPro:IPR029053" /db_xref="InterPro:IPR033703" /db_xref="InterPro:IPR036203" /db_xref="InterPro:IPR036988" /db_xref="UniProtKB/Swiss-Prot:Q66575" /protein_id="CAA55650.1" /translation="MGAQVSTQKTGAHETGLSASGNSIIHYTNINYYKDAASNSANRQ DFTQDPGKFTEPVKDIMIKSMPALNSPTAEECGYSDRVRSITLGNSTITTQECANVVV GYGTWPDYLHDDEATAEDQPTQPDVATCRFYTLESIQWQKTSDGWWWKFPEALKDMGL FGQNMHYHYLGRSGYTIHVQCNASKFHQGCLLVVCVPEAEMGCATVANEVNAAALSSG ETAKHFAKTGATGTHTVQSIVTNAGMGVGVGNLTIFPHQWINLRTNNSATIVMPYINS VPMDNMFRHYNFTLMIIPFVPLDFTAEASTYVPITVTVAPMCAEYNGLRLASHQGLPT MNTPGSNQFLTSDDFQSPSAMPQFDVTPELRIPGEVKNLMEIAEVDSVVPVNNTQDSV YNMDVYKIPVSGGNQLSTQVFGFQMQPGLNSVFKRTLLGEILNYYAHWSGSVKLTFVF CGSAMALAKFLLAYSPPGADPPKSRKEAMLGTHVIWDIGLQSSCVLCVPWISQTHYRL VQQDEYTSAGYVTCWYQTSLVVPPGAPATCGVLCLASACNDFSVRMLRDTPFIEQKQL LQGDVEEAVNRAVARVADTLPTGPRNSESIPALTAAETGHTSQVVPGDTMQTRHVKNY HSRTESSVENFLCRAACVYITKYKTKDSDPVQRYANWRINTRQMVQLRRKFELFTYLR FDMEVTFVITSSQDDGTQLAQDMPVLTHQVMYIPPGGPVPNSVTDFAWQSSTNPSIFW TEGNAPARMSIPFISIGNAYSNFYDGWSHFTQDGVYGFNSLNNMGSIYIRHVNEQSPY AITSTVRVYFKPKHVRAWVPRPPRLCAYEKSSNVNFKPTDVTTSRTSITEVPSLRPSV VNTGAFGQQSGAAYVGNYRVVNRHLATHVDWQNCVWEDYNRDLLVSTTTAHGCDTIAR CQCTTGVYFCASRNKHYPVSFEGPGLVEVQESEYYPRRYQSHVLLAAGFSEPGDCGGI LRCEHGVIGLVTMGGEGVVGFADVRDLLWLEDDAMEQGVKDYVEQLGNAFGSGFTNQI CEQVNLLKESLVGHDSILEKSLKALVKIISALVIVVRNHDDLITVTATLALIGCTSSP WRWLKHKVSQYYGIPMAERQSNGWLKKFTEMTNACKGMEWIAIKIQKFIEWLKLKILP EVKEKHEFLNRLKQLPLLESQIATIEQSAPSQSDQEQLFSNVQYFAHYCRKYAPLYAA EAKRVFSLEKKMSNYIQFKSKCRIEPVCLLLHGSPGAGKSVATSLIGRSLAEKLNSSV YSLPPDPDHFDGYKQQAVVIMDDLCQNPDGKDVSLFCQMVSSVDFVPPMAALEEKGIL FTSPFVLASTNAGSINAPTVSDSRALARRFHFDMNIEVISMYSQNGKINMPMSVKTCD EECCPVNFKRCCPLVCGKAIQFIDRRTQVRYSLDMLVTEMFREYNHRHSVGATLEALF QGPPVIREIKISVAPETPPPPAIADLLKSVDSEAVREYCKEKGWLVPEVNSTLQIEKH VSRAFICLQALTTFVSVAGIIYIIYKLFAGFQGAYTGMPNQKPKVPTLRQAKVQGPAF EFAVAMMKRNASTVKTEYGEFTMLGIYDRWAVLPHHAKPGPTILMNDQEIGVLDAKEL VDKDGTNLELTLLKLNRNEKFRDIRGFLAREEAEVNEAVLAINTSKFPNMYIPVGQVT DYGFLNLGGTPTKRMLMYNFPTRAGQCGGVLMSTGKVLGIHVGGNGHQGFSAALLRHY FNEEQGEIEFIESSKDAGFPVINTPSKTKLEPSVFHQVFEGNKEPAVLRNGDPRLKVN FEEAIFSKYIGNINTHVDEYMLEAVDHYAGQLATLDISTEPMKLEDAVYGTEGLEALD LTTSAGYPYVAIGIKKRDILSKKTKDLTKLKECMDKYGLNLPMVTYVKDELRSSEKVA KGKSRLIEASSLNDSVAMRQTFGNLYKTFHLNPGIVTGSAVGCDPDLFWSKIPVMLDG HLIAFDYSGYDASLSPVWFACLKLLLEKLGYTHRETNYIDYLCNSHHLYRDKHYFVRG GMPSGCSGTSIFNSMINNIIIRTLMLKVYKGIDLDQFRMIAYGDDVIASYPWPIDASL LAEAGKGYGLIMTPADKGECFNEVTWTNVTFLKRYFRADEQYPFLVHPVMPMKDIHES IRWTKDPKNTQDHVRSLCLLAWHNGEQEYEEFIRKIRSVPVGRCLTLPAFSTLRRKWL DSF" mat_peptide 950..1731 /gene="VP2" mat_peptide 1732..2445 /gene="VP3" mat_peptide 2446..3405 /gene="VP1" mat_peptide 3406..3768 /gene="P2-A" mat_peptide 3769..4062 /gene="P2-B" mat_peptide 4063..5049 /gene="P2-C" mat_peptide 5050..5319 /gene="P3-A" mat_peptide 5320..5385 /gene="Vpg" mat_peptide 5386..5934 /gene="P3-C" /product="protease" mat_peptide 5935..7320 /gene="P3-D" /product="polymerase" BASE COUNT 2216 a 1728 c 1798 g 1759 t ORIGIN 1 ttaaaacagc ctgtgggttg tccccaccca cagggcccac tgggcgctag cacactggta 61 tcccggtacc tttgtgcgcc tgttttatat accctcccct cagtaaccta gaagttcatc 121 acaaatgatc aatagttagc tcaacaaacc agttgagcct agatcaagca cttctgttac 181 cccgggctga gtatcaataa gctgttgaca cggctgaagg agaaaacgcc cgttacccga 241 ccagctactt cggagaacct agtatcacca tagaggttgc gtagcgtttc gctccgcaca 301 accccagtgt agatcaggtc gatgagtcac cgcgttcccc acaggcgact gtggcggtgg 361 ctgcgttggc ggcctgccca tggggttacc catgggacgc ttcaatactg acatggtgtg 421 aagagttgac tgagctagct ggtagtcctc cggcccctga atgcggctaa tcctaactgt 481 ggagcaagtg cccacaaccc agtgggtggc ttgtcgtaat gggcaactct gcagcggaac 541 cgactacttt gggtgaccgt gtttctcttt attcttatat tggctgctta tggtgacaat 601 ctcagagttg ttaccatata gctattggtt tggccaacca gtgactaaca gagcaattat 661 atatcttttc attggattta tacctataaa caacaccagt tataccactt tgtgttacat 721 tattggcttg aactcgaaaa gatgggagcg caagtatcaa cacaaaaaac tggggcacac 781 gagactggcc tgagtgctag tggaaattcc atcatccact ataccaacat taattactac 841 aaagatgcgg catccaattc agcaaacagg caggatttca cccaagaccc cgggaaattc 901 accgagccag tgaaggatat catgataaaa tcgatgcctg cgttaaactc cccaacagca 961 gaagaatgtg ggtacagcga tagagtcaga tcaatcaccc tggggaactc taccatcacc 1021 acgcaggagt gtgccaatgt ggtggtggga tatggcacgt ggcctgatta tctacatgat 1081 gatgaggcca ctgcagagga ccaaccaaca caaccggatg tggcgacgtg taggttttac 1141 acacttgaat ccattcagtg gcagaagaca tcagatgggt ggtggtggaa gtttccggaa 1201 gcattgaaag acatgggact gttcggccaa aacatgcact atcattatct tggcaggtcg 1261 ggttacacca tccacgtcca atgtaacgcg tctaaattcc accagggttg tttgcttgtg 1321 gtgtgtgtgc ctgaagctga gatggggtgc gctacagtgg cgaatgaggt taacgcagcc 1381 gctctctcat ctggtgaaac ggcaaaacat tttgcaaaga ctggtgcgac gggaacccac 1441 acagtgcaaa gcatagtgac aaacgccggc atgggggtgg gcgtgggcaa tctgacaata 1501 ttcccacatc agtggataaa cctccgtacc aacaacagcg cgactattgt catgccttac 1561 ataaacagtg tgcccatgga taacatgttc agacactaca atttcaccct aatgatcatc 1621 cccttcgtcc cactggactt cacagctgag gcatctacgt atgtaccaat cactgtaaca 1681 gtagctccca tgtgcgccga gtacaacggg ctacgcctgg cctcgcatca aggtttgccg 1741 acaatgaaca cccctggtag taaccaattc ctcacatcag atgactttca atcaccatca 1801 gccatgccac aattcgatgt cacacccgag ctcaggattc caggggaggt aaagaactta 1861 atggaaatag ccgaagttga ctccgtagtg cctgtgaaca atacacagga ctcagtgtac 1921 aacatggatg tgtacaaaat tcctgttagt ggaggcaacc aactgtcaac tcaagtcttc 1981 gggttccaaa tgcaaccagg gctaaatagt gtgttcaaaa ggacattact aggtgagata 2041 ctgaactact atgcacactg gtctggtagt gtaaagctca cctttgtgtt ctgtggatcg 2101 gccatggcac tggccaaatt tctgctggca tattcccctc caggcgcaga ccccccaaag 2161 tctaggaaag aagcaatgct tggtactcac gtgatatggg atataggact tcagtcaagc 2221 tgcgtcttgt gcgtaccgtg gatcagccaa acacattata gattggttca gcaggatgaa 2281 tatacgagtg caggatatgt aacttgctgg tatcaaacta gtttggttgt cccgcccggc 2341 gctcccgcca cgtgtggagt cttgtgctta gcatcggcgt gcaatgattt ctctgtgaga 2401 atgttgagag acacaccttt tatcgagcaa aaacagctac tccaaggaga tgtggaggag 2461 gccgtgaaca gagccgttgc acgggtggcg gatacactac ccacagggcc gagaaattca 2521 gagagcatcc ccgcactaac agcagcagaa actgggcata catctcaggt ggttcctggg 2581 gataccatgc aaacccgtca tgtgaagaat taccactcca gaactgaatc gtctgttgaa 2641 aacttcttat gccgagcagc atgtgtgtat attacaaagt acaagaccaa ggacagtgat 2701 ccagtgcaaa ggtacgccaa ctggcggatc aacacccgtc aaatggttca gctaaggaga 2761 aaatttgagt tgtttacata cctaaggttt gatatggaag ttacttttgt gatcaccagt 2821 tcacaagatg atggcacgca gttggcgcag gacatgccag tattaacaca ccaagtcatg 2881 tatataccac ctggagggcc agtgccgaat agtgttactg attttgcgtg gcaatcgtct 2941 accaacccta gcatcttctg gacggaggga aacgctccag ctaggatgtc catccccttt 3001 atcagtatag gcaacgcgta tagcaatttc tatgatggtt ggtcacattt cacccaagat 3061 ggagtatatg gtttcaactc cctcaataac atgggctcca tctacattag gcatgtcaat 3121 gaacaaagcc cgtatgcaat tacgagcaca gtcagagtct atttcaaacc aaaacacgtg 3181 cgggcctggg tgccaagacc acctaggctt tgtgcatatg agaaatcaag caacgtgaat 3241 ttcaaaccaa cagatgtgac tacctcccga acatccatca cagaagtccc tagtcttaga 3301 ccatcagtgg taaatactgg agctttcggt cagcaatcag gagcggctta tgtgggaaac 3361 tatagagtgg ttaatagaca cctagccact catgttgact ggcagaactg tgtgtgggag 3421 gactataaca gggacctcct tgtaagcacc accacagctc atgggtgtga caccatagcc 3481 agatgccaat gcacaacagg cgtgtacttc tgtgcatcga ggaataaaca ctacccagtc 3541 agttttgaag gaccaggtct ggtagaagtc caggagagcg agtactaccc caggaggtat 3601 caatcacacg tcttgctggc tgcgggattt tcagagccag gagattgtgg agggattctc 3661 agatgtgagc acggtgtcat cggtctagtt actatgggtg gcgaaggcgt tgtcggattc 3721 gctgatgtac gcgacctgtt atggcttgaa gatgacgcca tggaacaagg agtcaaggat 3781 tacgtggaac aactagggaa cgcctttggt tcaggattca ctaaccaaat ctgtgagcag 3841 gtcaacctcc taaaagagtc actggtgggt cacgattcca tcctagagaa gtcccttaaa 3901 gccctagtga aaatcatatc agcactagtg atagtggtga ggaaccatga tgatttgatc 3961 actgtaactg ctactcttgc cctcattggt tgtacctcct ctccatggcg gtggctcaag 4021 cacaaggtgt cacaatacta cgggataccc atggcagagc gccaaagcaa cgggtggctc 4081 aagaagttca cagagatgac taacgcctgc aaagggatgg aatggattgc catcaaaatc 4141 caaaagttca tagagtggct taaacttaag attttaccag aagttaagga aaaacatgaa 4201 ttcctgaata ggctcaagca actcccactg ttggagagtc aaatagcaac catcgagcag 4261 agtgcaccgt cccagagcga tcaggagcag ctcttttcaa atgttcagta ctttgcccat 4321 tattgcagaa aatatgcgcc cctatacgca gctgaggcaa aaagggtgtt ctctcttgaa 4381 aagaaaatga gtaattacat acagttcaag tccaaatgcc gtattgaacc tgtatgcttg 4441 ctactacatg ggagccccgg agcagggaaa tcagttgcta ccagcctcat tgggcgatca 4501 ctagctgaaa aattgaatag ctcagtgtac tccttaccac cagacccaga tcactttgat 4561 ggttacaagc aacaagctgt agtgatcatg gacgatctgt gccaaaatcc agatggaaaa 4621 gatgtgtctt tgttctgtca aatggtgtct agtgtagatt ttgtaccacc aatggccgcg 4681 ctagaggaga aaggcatttt gttcacctct ccattcgttc tagcctcaac caatgcagga 4741 tccatcaacg caccaacagt ttcggacagc agagccctag ctagaaggtt ccactttgac 4801 atgaacattg aagttatctc catgtacagt caaaatggaa aaataaacat gcccatgtca 4861 gtcaaaacat gtgatgagga gtgctgccca gtcaatttca agagatgctg cccactggtg 4921 tgtggcaagg ctattcagtt cattgacaga agaacccaag tcagatattc actggatatg 4981 ttagtcaccg agatgttcag ggagtacaac cacaggcaca gtgtgggcgc caccctcgag 5041 gctctgttcc aaggtccacc ggtcatcagg gagatcaaga tcagtgttgc tccagaaaca 5101 cctcccccac cagcaatcgc tgatttatta aaatcagtag acagtgaagc tgtgagagag 5161 tactgcaagg aaaaaggctg gcttgtaccg gaagttaact ccaccctaca gattgagaag 5221 cacgtcagca gagcatttat ctgtctacaa gctctgacca ctttcgtctc agtagctggc 5281 ataatctaca ttatctacaa gttgtttgcc ggctttcagg gcgcgtatac ggggatgcca 5341 aatcagaaac ccaaagtgcc cactctgaga caagctaaag tgcagggccc agcattcgag 5401 ttcgctgtgg caatgatgaa aaggaacgcc agcacagtga aaacggaata tggtgagttc 5461 accatgctcg gcatctatga cagatgggca gtgctaccac accacgccaa gcctggaccg 5521 actattttga tgaatgatca ggagatcggc gtgttagacg ccaaagaatt agtggacaaa 5581 gatgggacaa atctggagtt gaccctttta aagctcaacc gcaatgagaa gtttagggac 5641 atcagagggt ttctggcgag agaggaagct gaagtgaatg aggctgttct ggcaataaac 5701 acaagcaagt tcccaaatat gtacataccc gtaggtcaag tcactgatta cggtttcctg 5761 aacctggggg gaacacccac aaagaggatg ctcatgtaca actttccaac tagagcaggg 5821 caatgtggtg gggtactcat gtcaacaggg aaagttcttg gtatacatgt aggaggaaat 5881 ggacatcaag ggttctccgc tgctcttctt aggcactact ttaatgagga gcaaggtgaa 5941 atagagttta ttgagagctc aaaggatgca ggattccctg tgatcaacac ccccagcaaa 6001 acaaaactgg aaccaagcgt gtttcatcag gtgtttgaag gcaataaaga gccagcagtc 6061 cttagaaatg gtgatccgcg tcttaaagta aactttgaag aagccatatt ttccaagtac 6121 atcgggaaca tcaacacaca tgtggatgaa tacatgctcg aagcagtgga tcactacgca 6181 gggcaactgg ctactcttga cattagcact gaacccatga aactagaaga tgcagtgtat 6241 ggcactgaag gactagaggc tcttgactta acaacaagtg cagggtaccc gtatgtcgcc 6301 ataggcatca aaaagagaga catcctatcc aaaaagacta aagatctgac taaattgaag 6361 gaatgcatgg acaagtacgg tttgaacctg ccgatggtga cttatgtgaa ggatgaactt 6421 agatcatcag agaaagtggc taagggaaaa tcaagactca ttgaagcatc tagtttaaat 6481 gactctgtcg cgatgaggca gacgtttggc aacttgtaca aaacattcca tctgaacccg 6541 ggcattgtga caggcagtgc agttggatgt gatccggacc ttttctggag taaaataccc 6601 gtgatgttag acggccacct catagcattc gattactccg gatatgatgc cagcctgagc 6661 cctgtgtggt tcgcttgtct aaaactgcta ctcgaaaaac tcgggtacac gcacagagag 6721 acaaactaca tcgactacct atgcaactct caccacctgt acagagacaa acactacttt 6781 gtgcgtggtg gcatgccatc agggtgctcc ggtaccagca ttttcaattc aatgatcaat 6841 aacatcataa tcaggacact gatgctcaaa gtgtacaagg gaattgacct ggaccagttt 6901 agaatgattg catatggtga tgatgtaatt gcatcctacc cttggcctat agacgcttca 6961 ctacttgctg aagctgggaa gggttatgga ctgattatga caccagcaga caaaggggag 7021 tgcttcaatg aggttacctg gaccaatgtc accttcctaa agaggtactt tagagctgat 7081 gagcagtatc ctttcctggt tcatccagtt atgcccatga aggacatcca tgaatctatt 7141 aggtggacaa aggatccaaa gaacactcaa gaccacgttc gatcgttgtg cttattggct 7201 tggcataacg gagaacaaga atatgaggaa ttcatccgaa agatcagaag cgtcccggtt 7261 gggcgctgtc tgactctccc cgcgttttca actttacgca gaaaatggct ggattccttt 7321 taaattagag acaatttgaa ataatttaaa ttggcttaac cctactgtac taaccgaact 7381 agacaacggt gcagtagggg taaattctcc gcattcggtg cgaaaaaaaa aaaaaaaaaa 7441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 7501 a //