LOCUS X56213 6607 bp DNA linear INV 14-NOV-2006 DEFINITION C.elegans gene for vitellogenin. ACCESSION X56213 VERSION X56213.1 KEYWORDS vitellogenin. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 6607) AUTHORS Blumenthal T., Cane J., Denison K., Donegan M., Kirtland S., Lea K., Nettleton M., Sharrock W., Spieth J., Squire M., Zucker-Aprison E. JOURNAL Submitted (05-DEC-1990) to the INSDC. T. Blumenthal, INDIANA UNIVERSITY, DEPT OF BIOLOGY, THIRD STREET, BLOOMINGTON, INDIANA 47405, USA REFERENCE 2 AUTHORS Blumenthal T. TITLE Vitellogen motifs conserved in Nematode and Vertebrates JOURNAL J. Mol. Evol. 0, 0(1990). FEATURES Location/Qualifiers source 1..6607 /organism="Caenorhabditis elegans" /chromosome="IV" /strain="N2, Bristol" /mol_type="genomic DNA" /clone_lib="SG25, 1059 library of J.Karn" /clone="F9" /db_xref="taxon:6239" regulatory 462..468 /regulatory_class="TATA_box" mRNA join(493..615,707..1166,1224..5171,5220..5489,5533..5806) exon 493..615 /number=1 prim_transcript 493..5806 CDS join(521..615,707..1166,1224..5171,5220..5489,5533..5715) /product="vitellogenin" /db_xref="GOA:P18948" /db_xref="InterPro:IPR001747" /db_xref="InterPro:IPR001846" /db_xref="InterPro:IPR011030" /db_xref="InterPro:IPR015255" /db_xref="InterPro:IPR015816" /db_xref="InterPro:IPR015819" /db_xref="UniProtKB/Swiss-Prot:P18948" /protein_id="CAA39670.1" /translation="MKFFIALALLGAALASTHLDRYFSIERNIQESSFRAGREYRYLF NGQLSAGLPVPSTPQGISRLQSQVTLQWTDGNTVRMQLQKTRFATSQQESNSMKMLPF ERFEEVERMNREHQELLSMPVEFDYEHGLVREIRFAENDQPWSENIKRAVINMLQVNI LKKEKYEGAEKSDNQEPTFSFTNVERTLEGECEVLYTVEEIKKEDKQRWAKSINLDKC TRRPYIHHVQTPVCKDCQQTLEQDKMSSTVLNYNITGTSSSFLINSVELRSQHLFAPI SEKHQLVSAFTLNTMELIYAGEKKTEIKQVRNEKTSELVYNQESEWAEQQWAQTGEEK YLRQLPQWTENKVEMIKKMFSLMAKQIEQGEAELEAPHTVARIVKVLRECNEEQLEQI YRHVAEHKDEKIAEQLRSIYFNTLRLAGTRVTIQQFVDKVQSRKNIAPLKASVAIKTL VDMRYPSLAIAEDIARLCESDVSSSFPALRQSCWLTYGAIVNGVCGQTPRVFVQKNGV KMCPRDAKQRIVDKLVQQFESASTRYEKVLALKTLANAGLDLSVYPLEKIILNEQHET TIRTQAIESFRRLRTQMPTKIQRVLMPVYLNRQQPQHIRMSALHQIIYTQPEWSVLSQ IGNQLRQERDQQVRAFTLSLLRSYANNESPCEQTFSSRVQSLLNNIPFSSQEIDRFES VYGKWSTYSRRHQSGFEANFASLFTTESVLPTEMMASIEGVLSGEWNQYFAQIGFTQK NMEKIIKKLLSNVQEKGLEQIVVRGKRASGSFQPTEFLSNLLEKLRITRRQSSEQDPH AFVYIRHRDMDYAFLPIDADSIPEVVRSMIQGGRLEIGDIERVLAQGIHFSASNAAFL YETVRRVPTPMGLPVQFTSKMPTISSIRGQVTFELEPKNGKSFDGLRLRVQAGPRVAS THVLSLRVICPIAEVGTKFLHQAVLNTPVDTEIRMNWEDKVVIRAIYNTPSEEKRIAM IQSRPVTFTRTVAPDARQYPEPIEMTYMLPAHKQLSQSLDREYPQIRVQGTLNRPTSV RIPQWIVDSNVEVYYKPNVEQYEAIFELNLYNNYKMEKNYEKVYKKHNGRRYLEAEPE YDEEEHREQITKKFEWLQNEKVYQHVAKFEIKPEVVKMEVEAVCNNDFHFCKTQIRGE ELKATIQYVYPQTPRTVEELKEQKYRQLVVMGEMNYGENTIHININGQQSQEQKKFVK QIEQAPEHETLLEASRLDQYQTVVEYEFEPKPAQYFARYWNMVQAYLRTQYPWTSRIE TREEPSRKNMIRATINVEPRQRLTVNMTIETPMETTVLERVELPFRLPTAQIHYQPRN SRYEQKPVMEKIAHHASKQANCVVKSTKINTFDQVAYRNQFTPCYSVLAKDCGSEKSE PRFVVLMKKINEKKEWKNVKVVYGENEIEMYKTEEGLICRVNGEEIEYQPESEIEKKQ YNIIWLNKNTLKFDSDDVTVQFDGVNARIHLSALYRNQQCGLCGHYDNEKETEFYDAE NQENTIPKFAKSYLYKDSKCNYEREMFEKEENFQRIEKNQEEEKDQEMNYEESRREQD DEPTEQVAIVERQHEICFTQKPVLRCQNGKSQESKKQKVTSVYCLPSSNSWARRQMRE IRREPLAQWPEHNVRNLRDQPQMEERTVRVAVDQKCDKFDY" intron 616..706 /number=1 exon 707..1166 /number=2 intron 1167..1223 /number=2 exon 1224..5171 /number=3 intron 5172..5219 /number=3 exon 5220..5489 /number=4 intron 5490..5532 /number=4 exon 5533..5806 /number=5 regulatory 5787..5793 /regulatory_class="polyA_signal_sequence" BASE COUNT 1977 a 1720 c 1297 g 1613 t ORIGIN 1 aatgaaccgt ttggtttggc cacaatgact aaaggctgac ccacatagaa aacatcaggt 61 gcctttgaag caatatttca catcttcgca aagctaaggt cattggttat ttttgccatt 121 tcatgactat aatggcatca ttttattccc ccaatttaac caaaagtcag atgcaaatgt 181 tgaaagagtt gcaatttcaa agtagaaaat gtaactaaac tgtcaaaaaa aattgtcata 241 ctttgaccag aaaccatctc cccatccacc tcccctcatc ggagccaccc gccaatccca 301 aaatggtacc taacattact gacactctcc cgcactcaac aattgacacc tgtctcaatg 361 actgataagc atgctgagtc tcttcaatcc gcatggtctc taagctactt tcagaattgc 421 aacatgctgc gatggacatc ttgtcgaagt ttaagagtat gtataaaagg acacgagctt 481 catgtattct tcactcggtc acttagatcg atcaatcact atgaagttct tcatagcgct 541 tgctctcttg ggagcggcac tcgcctcgac ccatttggat cgttacttct ccatcgagag 601 aaatattcaa gaatcgtaag ttacttttta aatcattttt gagagttgac cctttttata 661 tttcaattat tttcaaaaat atcaatcaca ttgtactcct tttcagctca ttccgcgccg 721 gacgcgagta ccgctacctc ttcaatggcc agctctctgc cggacttcca gtcccatcta 781 ccccacaagg aatctcacgt cttcaatctc aagttaccct ccaatggact gatggaaaca 841 ccgtccgcat gcaactccag aagacccgct tcgcaacctc tcagcaagag tccaactcca 901 tgaagatgct cccattcgag cgtttcgagg aggttgagcg catgaaccgt gagcaccaag 961 agcttttgag catgccagtt gagtttgatt acgaacacgg acttgtcaga gagatccgtt 1021 ttgctgagaa cgatcagcca tggtcagaga acatcaagag agccgtcatc aacatgcttc 1081 aagtcaacat cctcaagaag gagaagtacg aaggagctga gaagagtgac aaccaagaac 1141 caactttctc tttcaccaat gttgaggtaa gttctaaata tacatatata tttgagttcg 1201 aaatttgaat aattgaattt cagcgcaccc tcgaaggaga atgcgaggtc ctttacaccg 1261 ttgaagagat caagaaggag gataagcaac gttgggctaa gtcgatcaac ttagacaaat 1321 gtacccgccg cccatacatc catcacgtgc agactccagt gtgcaaggat tgccagcaaa 1381 ctcttgagca agacaagatg agctccacag ttctcaacta caacatcact ggaacttcat 1441 caagcttcct catcaactcc gttgaacttc gctcccaaca cctttttgcc ccaatctccg 1501 agaagcatca acttgtttct gccttcacct tgaacaccat ggagcttatc tatgctggag 1561 agaagaagac cgagatcaag caagtccgca atgagaagac ttccgagctt gtctacaacc 1621 aggaatccga atgggctgag caacaatggg ctcaaactgg agaggagaag taccttagac 1681 aactcccaca atggaccgag aacaaggtcg agatgatcaa aaagatgttc tctttgatgg 1741 ccaagcaaat cgaacaagga gaggctgagc ttgaggctcc acacactgtt gccagaatcg 1801 tcaaggttct ccgtgagtgc aacgaggagc aactcgaaca aatctaccgc cacgtcgctg 1861 agcacaagga tgagaagatt gctgagcaac ttcgctccat ctacttcaac acccttcgtc 1921 tcgccggaac tcgtgtcacc attcaacaat tcgttgacaa ggttcaatct cgcaagaaca 1981 ttgctccact caaagcctcc gttgccatca agacactcgt cgacatgcgc tacccatctc 2041 ttgctattgc tgaagatatc gctcgccttt gcgaatccga tgtatcttca agcttcccag 2101 ctcttcgtca atcctgctgg ctcacctacg gagctattgt caatggagtg tgcggacaaa 2161 ccccaagagt cttcgtccag aagaatggag tcaagatgtg cccacgtgat gctaagcaaa 2221 gaatcgttga caagctcgtc caacaattcg aatctgcatc cacccgctac gagaaggttc 2281 ttgctttgaa gacccttgct aatgccggac ttgatctctc tgtctaccca ctcgagaaga 2341 tcattctcaa cgagcaacac gaaaccacca tccgcacaca agccatcgag tcattccgtc 2401 gtcttcgcac ccagatgcca acaaagattc aacgtgttct tatgccagtc taccttaacc 2461 gtcaacaacc acaacacatc cgcatgtctg cactccatca gatcatctac actcaaccag 2521 aatggtccgt cctttcccag atcggaaacc aactcagaca agagcgcgac caacaagttc 2581 gtgccttcac cctctccctt ctccgttctt atgctaacaa cgagtctcca tgcgagcaga 2641 cattctcttc ccgtgttcaa tctctcctca acaacatccc attctcatcc caagagattg 2701 atcgcttcga gtctgtctat ggaaaatggt ccacctactc cagacgccac caatccggat 2761 tcgaagctaa ctttgcttcc ctcttcacca ccgaatctgt tctcccaacc gagatgatgg 2821 cttcgattga aggagttctc tccggagaat ggaaccaata cttcgctcaa atcggattta 2881 cccagaagaa tatggagaag atcatcaaga aacttctctc caatgttcaa gaaaaaggac 2941 ttgaacaaat cgttgttcgc ggaaagagag cttccggatc cttccaacca actgaattct 3001 tgagcaacct tctcgagaag cttcgcatca cccgtcgtca atcatctgag caagatccac 3061 atgcctttgt ctacatcaga caccgtgata tggactacgc cttccttcca attgatgctg 3121 actcaatccc agaggttgtc cgctccatga tccaaggagg aagacttgag atcggagata 3181 tcgagagagt ccttgcccaa ggaatccact tctctgcctc caacgctgct ttcctttacg 3241 agaccgtccg cagagttcca actccaatgg gacttccagt tcaattcacc tccaagatgc 3301 caaccatctc ctccatccgc ggacaagtaa ctttcgagct tgagccaaag aacggaaaga 3361 gcttcgacgg acttcgcctt cgtgttcaag ctgggccacg tgtagcctcc acccacgtcc 3421 tttctcttag agttatctgc ccaatcgccg aggtcggaac caagttcctt caccaagccg 3481 tccttaatac tccagttgac actgagatca gaatgaactg ggaagacaag gttgttatcc 3541 gtgctatcta caacacccca tccgaggaga agagaatcgc catgatccaa tctcgtccag 3601 tcaccttcac ccgcactgtc gccccagatg ctcgtcaata cccagaacca atcgagatga 3661 cctacatgct cccagcccac aaacaactca gccaatctct tgaccgtgaa tacccacaaa 3721 tccgtgttca aggaactctc aaccgcccaa ccagcgtgag aatcccacaa tggatagttg 3781 acagcaacgt cgaggtctac tacaagccaa atgttgagca atacgaggct atttttgagc 3841 ttaacttgta caacaactac aagatggaga agaactacga gaaggtatac aagaagcata 3901 acggaagaag atatcttgag gctgagccag aatacgatga ggaagagcac cgtgagcaga 3961 tcacaaagaa gttcgaatgg ctccaaaacg agaaggtcta ccaacacgtc gccaagttcg 4021 aaatcaagcc agaggttgtc aagatggagg ttgaggctgt ctgcaacaat gacttccact 4081 tctgcaagac ccaaatccgc ggagaagagc ttaaggctac aatccaatac gtctacccac 4141 aaaccccaag gactgttgag gagctcaagg agcaaaagta ccgtcaactc gttgttatgg 4201 gagagatgaa ctacggagag aacaccattc acatcaacat caacggacaa caatcccaag 4261 aacaaaagaa gttcgtcaag caaattgagc aagccccaga gcacgagacc cttctcgagg 4321 catctagact tgaccaatac caaactgttg ttgagtacga gttcgagcca aagccagctc 4381 aatacttcgc cagatactgg aacatggttc aagcttatct tcgcacccaa tacccatgga 4441 cttccagaat cgagacccgt gaggagccaa gccgcaagaa catgatccgt gccacaatca 4501 atgttgaacc acgccaacgt ctaactgtca acatgactat cgagacccca atggagacca 4561 ccgttcttga gcgtgtcgag cttccattca gacttccaac tgcccaaatc cactaccagc 4621 caagaaactc ccgctacgag cagaagccag tcatggagaa gatcgcccat cacgcttcca 4681 agcaagccaa ctgtgttgtc aagagcacca agatcaacac cttcgaccaa gttgcctacc 4741 gtaaccaatt caccccatgc tactccgttc tcgccaagga ttgtggatct gagaagagcg 4801 agccccgttt cgttgtcctt atgaagaaga tcaacgagaa gaaggagtgg aagaacgtca 4861 aggttgtcta cggagaaaac gagattgaaa tgtacaagac tgaggaagga ctcatctgcc 4921 gtgtcaacgg agaagaaatc gagtaccaac cagaatctga gattgagaag aagcaataca 4981 acatcatctg gcttaacaag aacacactca agttcgattc tgatgatgtc actgttcaat 5041 tcgatggagt caatgcccgt attcaccttt ccgctctcta cagaaaccaa caatgcggac 5101 tttgcggcca ctacgacaac gagaaggaaa ccgaattcta tgatgctgag aaccaagaga 5161 acaccattcc agtaagtttc ttaattttga tacacaacaa taatcatctc aattttcaga 5221 agttcgccaa gagctacttg tacaaggact ccaagtgcaa ctacgagcgt gagatgttcg 5281 agaaggagga gaacttccaa cgcattgaga aaaatcaaga ggaggagaag gaccaagaga 5341 tgaactacga ggaatctcgc cgcgagcaag acgatgagcc aactgagcaa gtcgctattg 5401 tcgagcgtca acacgagatc tgcttcaccc agaagccagt tcttcgctgc caaaacggaa 5461 agtcacagga gtccaagaag caaaaggtgg tagtagttat acatttcaat caattattct 5521 gtaacatttc agacctccgt ctactgcctc ccatcctcca actcatgggc tcgccgtcaa 5581 atgcgcgaga tccgccgtga gccactcgcc caatggccag agcacaacgt ccgcaacctt 5641 cgtgaccaac cacaaatgga ggagcgcacc gttcgcgtcg ccgtcgacca gaagtgcgac 5701 aagttcgact attgaactac ctcttcttca caatcataca catcgtagga ctatctttgt 5761 caattgaatt gttttataga tttcaataat aaacaatttc aacaattttt tgtttgtgga 5821 aaatttactt taaacatatt ccaatttgaa ctgttcaatt caaacaactc ggcatttttg 5881 ccacagagtt cacttctaca gtctcctctc gcacgtcgtc agagttcaca aagagttcag 5941 atttttctgt agaagtgcga gggaactcta tggcaaatgg ccagtattta gaaacataaa 6001 gtttatgttg aaacaatcag aatacggaaa tacaattgaa atgcaacacc ggggaaaatt 6061 gtccgatttc tgtcaatcat agttacttgt ttaacccgtc tacattgaat acccaagata 6121 taaaaaatca tagtaataaa ttctctgtaa agctctcctg atagctccat cttcttcaat 6181 aagcttttca tatttaagtc gtagagatgt tccagatgtt gagtgctggg tttttccttc 6241 tgaaagtgtt gaaattgaat gaaatcaaga atgcaattaa aaaaagctta cttgaaagtt 6301 cttctctgat tcgttcagat tttcttctgg tacatttcta tttttgaaaa cggtcaataa 6361 attatcaatc atctttattt tttctgtccc cgtactcgaa tattgtatta ctgttgagtt 6421 cttgatgttg tttttcatat cgcagtacct gagaaaccgt tgaacgatct tttggtttaa 6481 atttttgaag attctcatga ctaggagaaa tggaaacatg aattaggcaa taggctagac 6541 aaaaactgtt atcttgatct tagcgagaca ttatgtcttt tgtcttcttg tagcctctta 6601 tgaattc //