LOCUS X12600 4160 bp DNA linear BCT 18-APR-2005 DEFINITION Klebsiella pneumoniae nifX, nifU, nifS, nifV and nifW genes. ACCESSION X12600 VERSION X12600.1 KEYWORDS nifS gene; nifU gene; nifV gene; nifW gene; nifX gene; nitrogen fixation; nitrogenase. SOURCE Klebsiella pneumoniae ORGANISM Klebsiella pneumoniae Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella. REFERENCE 1 (bases 1 to 4160) AUTHORS Beynon J. JOURNAL Submitted (08-AUG-1988) to the INSDC. Beynon J., BioTechnica International Inc., 85 Bolton St, Cambridge, ma 02140, USA. REFERENCE 2 (bases 1 to 4160) AUTHORS Beynon J., Cannon M., Banan-Wollaston V., Ally A., Sutterquist R., Cannon F. TITLE The nucleotide sequence of the nifT, nifY, nifX and nifW genes of K. pneumoniae JOURNAL Nucleic Acids Res. 16(20), 9860-9860(1988). PUBMED 3054814 FEATURES Location/Qualifiers source 1..4160 /organism="Klebsiella pneumoniae" /mol_type="genomic DNA" /db_xref="taxon:573" CDS <1..25 /codon_start=2 /transl_table=11 /product="nifE gene product (1 is 3rd base in codon)" /db_xref="GOA:P08738" /db_xref="InterPro:IPR000318" /db_xref="InterPro:IPR000510" /db_xref="InterPro:IPR005975" /db_xref="UniProtKB/Swiss-Prot:P08738" /protein_id="CAA31115.1" /translation="GGAYAAD" CDS 12..482 /transl_table=11 /product="nifX gene product (AA 1 - 156)" /db_xref="GOA:P09136" /db_xref="InterPro:IPR003731" /db_xref="InterPro:IPR034169" /db_xref="InterPro:IPR036105" /db_xref="UniProtKB/Swiss-Prot:P09136" /protein_id="CAA31116.1" /translation="MPPINRQFDMVHSDEWSMKVAFASSDYRHVDQHFGATPRLVVYG VKADRVTLIRVVDFSVENGHQTEKIARRIHALEDCVTLFCVAIGDAVFRQLLQVGVRA ERVPADTTIVGLLQEIQLYWYDKGQRKNTRQRDPERFTRLLQEQEWHGDPDPRR" regulatory 501..610 /note="nifU promoter" /regulatory_class="promoter" misc_feature 611..611 /note="nifU transcription start site" CDS 678..1502 /transl_table=11 /product="nifU gene product (AA 1 - 274)" /db_xref="GOA:P05343" /db_xref="InterPro:IPR001075" /db_xref="InterPro:IPR002871" /db_xref="InterPro:IPR007419" /db_xref="InterPro:IPR010238" /db_xref="InterPro:IPR016217" /db_xref="InterPro:IPR034904" /db_xref="InterPro:IPR041854" /db_xref="UniProtKB/Swiss-Prot:P05343" /protein_id="CAA31117.1" /translation="MWNYSEKVKDHFFNPRNARVVDNANAVGDVGSLSCGDALRLMLR VDPQSEIIEEAGFQTFGCGSAIASSSALTELIIGHTLAEAGQITNQQIADYLDGLPPE KMHCSVMGQEALRAAIANFRGESLEEEHDEGKLICKCFGVDEGHIRRAVQNNGLTTLA EVINYTKAGGGCTSCHEKIELALAEILAQQPQTTPAVASGKDPHWQSVVDTIAELRPH IQADGGDMALLSVTNHQVTVSLSGSCSGCMMTDMTLAWLQQKLMERTGCYMEVVAA" CDS 1533..2726 /transl_table=11 /product="nifS gene product (AA 1 - 397)" /db_xref="GOA:P05344" /db_xref="InterPro:IPR000192" /db_xref="InterPro:IPR015421" /db_xref="InterPro:IPR015422" /db_xref="InterPro:IPR015424" /db_xref="InterPro:IPR016454" /db_xref="InterPro:IPR017772" /db_xref="InterPro:IPR020578" /db_xref="UniProtKB/Swiss-Prot:P05344" /protein_id="CAA31118.1" /translation="MKQVYLDNNATTRLDPMVLEAMMPFLTDFYGNPSSIHDFGIPAQ AALERAHQQAAALLGAEYPSEIIFTSWPRATPRHAAIALLPERREIITSVVEHPATLA ACEHLERQGYRIHRIAVDSEGALDMAQFRAALSPRVALVSVMWANNETGVLFPIGEMA ELAHEQGALFHCDAVQVVGKIPIAVGQTRIDMLSCSAHKFHGPKGVGCLYLRRGTRFR PLLRGGHQEYGRRAGTENICGIVGMGAACELANIHLPGMTHIGQLRNRLEHRLLASVP SVMVMGGGQPRVPGTVNLAFEFIEGEAILLLLNQAGIAASSGSACTSGSLEPSHVMRA MNIPYTAAHGTIRFSLSRYTREKEIDYVVATLPPIIDRLRALSPYWQNGKPRPADAVF TPVYG" CDS 2741..3886 /transl_table=11 /product="nifV gene product (AA 1 - 381)" /db_xref="GOA:P05345" /db_xref="InterPro:IPR000891" /db_xref="InterPro:IPR002034" /db_xref="InterPro:IPR013477" /db_xref="InterPro:IPR013785" /db_xref="UniProtKB/Swiss-Prot:P05345" /protein_id="CAA31119.1" /translation="MERVLINDTTLRDGEQSPGVAFRTSEKVAIAEALYAAGITAMEV GTPAMGDEEIARIQLVRRQLPDATLMTWCRMNALEIRQSADLGIDWVDISIPASDKLR QYKLREPLAVLLERLAMFIHLAHTLGLKVCIGCEDASRASGQTLRAIAEVAQNAPAAR LRYADTVGLLDPFTTAAQISALRDVWSGEIEMHAHNDLGMATANTLAAVSAGATSVNT TVLGLGERAGNAAAWKPSALGLERCLGVETGVHFSALPALCQRVAEAAQRAIDPQQPL VGELVFTHESGVHVAALLRDSESYQSIAPSLMGRSYRLVLGKHSGRQAVNGVFDQMGY HLNAAQINQLLPAIRRFAENWKRSPKDYELVAIYDELCGESALRARG" CDS 3886..4146 /transl_table=11 /product="nifW gene product (AA 1 - 86)" /db_xref="GOA:P09137" /db_xref="InterPro:IPR004893" /db_xref="UniProtKB/Swiss-Prot:P09137" /protein_id="CAA31120.1" /translation="MMEWFYQIPGVDELRSAESFFQFFAVPYQPELLGRCSLPVLATF HRKLRAEVPLQNRLEDNDRAPWLLARRLLAESYQQQFQESGT" CDS 4143..>4160 /transl_table=11 /product="nifZ gene product" /db_xref="GOA:P0A3U2" /db_xref="InterPro:IPR007415" /db_xref="UniProtKB/Swiss-Prot:P0A3U2" /protein_id="CAA31121.1" /translation="MRPKFT" BASE COUNT 788 a 1299 c 1316 g 757 t ORIGIN 1 aggaggcgct tatgccgccg attaaccgtc agtttgatat ggtccactcc gatgagtggt 61 ctatgaaggt cgccttcgcc agctccgact atcgtcacgt cgatcagcac ttcggcgcta 121 ccccgcggct ggtggtgtac ggcgtcaagg cggatcgggt cactctcatc cgggtggttg 181 atttctcggt cgagaacggc caccagacgg agaagatcgc caggcggatc cacgccctgg 241 aggattgcgt cacgctgttc tgcgtggcga ttggcgacgc ggtttttcgc cagctgttgc 301 aggtgggcgt gcgtgccgaa cgcgttcccg ccgacaccac catcgtcggc ttactgcagg 361 agattcagct ctactggtac gacaaagggc agcgcaaaaa tacgcgccag cgcgacccgg 421 agcgctttac ccgtctgctg caggagcagg agtggcatgg ggatccggac ccgcgccgct 481 agccgtgtcg tttctgtgac aaagcccaca aaacatcgcg acactgtagg acgaaccttg 541 tcaggactaa tacacaacca tttgaaaaat attaatttta ttctctggta tcgcaattgc 601 tagttcgtta tcgccaccgc gcttccgcgg tgaaccgcgc cccggcgttt tccgtcaaca 661 tccctggagc tgacagcatg tggaattact ccgagaaagt gaaagaccat ttttttaacc 721 cccgcaatgc gcgcgtggtg gacaacgcca acgcggtagg cgacgtcggt tcgttaagct 781 gcggcgacgc cctgcgcctg atgctgcgcg tcgacccgca aagcgaaatc attgaggagg 841 cgggcttcca gaccttcggc tgcggcagcg ccatcgcctc ctcctccgcg ctgacggagc 901 tgattatcgg ccataccctc gccgaagccg ggcagataac caatcagcag attgccgatt 961 atctcgacgg actgccgccg gagaaaatgc actgctcggt gatgggccag gaggccctgc 1021 gcgcggccat cgccaacttt cgcggcgaaa gccttgaaga ggagcacgac gagggcaagc 1081 tgatctgcaa atgcttcggc gtcgatgaag ggcatattcg ccgcgcggta cagaacaacg 1141 ggctgaccac ccttgccgag gtgatcaact acaccaaagc gggcggcggc tgcacctctt 1201 gccacgaaaa aatcgagctg gccctggcgg agatcctcgc ccagcagccg cagacgacgc 1261 cagccgtggc cagcggcaaa gatccgcact ggcagagcgt cgtcgatacc atcgcagaac 1321 tgcggccgca tattcaggcc gacggcggcg atatggcgct actcagcgtc accaaccacc 1381 aggtgaccgt cagcctctcc ggcagctgta gcggctgcat gatgaccgat atgaccctgg 1441 cctggctgca gcaaaaactg atggaacgta ccggctgtta tatggaagtg gtggcggcct 1501 gagccgcggt taactgaccc aagggggaca agatgaaaca ggtttatctc gataacaacg 1561 ccaccacccg tctggacccg atggtcctgg aagcgatgat gccctttttg accgattttt 1621 acggcaaccc ctcgtcgata cacgattttg gcattccggc ccaggcggct ctggaacgcg 1681 cgcatcagca ggctgcggcg ctgctgggcg cggagtatcc cagcgagatc atctttacct 1741 cctggccacg agccacgcca cgccatgctg cgatcgccct gctgcctgag cgtcgcgaaa 1801 tcatcaccag cgtggtcgaa catccggcga cgctggcggc ctgcgagcac ctggagcgcc 1861 agggctaccg gattcatcgc atcgcggtgg atagcgaggg ggcgctggac atggcgcagt 1921 tccgcgcggc gctcagcccg cgcgtcgcgt tggtcagcgt gatgtgggcg aataacgaaa 1981 ccggggtgct tttcccgatc ggcgaaatgg cggagctggc ccatgaacaa ggggcgctgt 2041 ttcactgcga tgcggtgcag gtggtcggga aaataccgat cgccgtgggc cagacccgca 2101 tcgatatgct ctcctgctcg gcgcataagt tccacgggcc aaaaggcgta ggctgtcttt 2161 atctgcggcg gggaacgcgc tttcgcccgc tgctgcgcgg cggtcaccag gagtacggtc 2221 ggcgagccgg gacagaaaat atctgcggaa tcgtcggcat gggcgcggcc tgcgagctgg 2281 cgaatattca tctgccggga atgacgcata tcggccaatt gcgcaacagg ctggagcatc 2341 gcctgctggc cagcgtgccg tcggtcatgg tgatgggcgg cggccagccg cgggtgcccg 2401 gcacggtgaa tctggccttt gagtttattg aaggtgaagc cattctgctg ctgttaaacc 2461 aggccgggat cgccgcctcc agcggcagcg cctgcacctc aggctcgctg gaaccctccc 2521 acgtgatgcg ggcgatgaat atcccctaca ccgccgccca cggcaccatc cgcttttctc 2581 tctcgcgcta cacccgggag aaagagatcg attacgtcgt cgccacgctg ccgccgatta 2641 tcgaccggct gcgcgcgctg tcgccctact ggcagaacgg caagccgcgc ccggcggacg 2701 ccgtattcac gccggtttac ggctaaggcg gaggtggctg atggaacgcg tgctgattaa 2761 cgataccacc ctgcgcgacg gcgagcagag ccccggcgtc gcctttcgca ccagcgaaaa 2821 ggtcgccatt gccgaggcgc tttacgccgc aggaataacg gcgatggagg tcggcacccc 2881 ggcgatgggc gacgaggaga tcgcgcggat ccagctggtg cgtcgccagc tgcccgacgc 2941 gaccctgatg acctggtgtc ggatgaacgc gctggagatc cgccagagcg ccgatctggg 3001 catcgactgg gtggatatct cgattccggc ttcggataag ctgcggcagt acaaactgcg 3061 cgagccgctg gcggtgctgc tggagcggct ggcgatgttt atccatcttg cgcataccct 3121 cggcctgaag gtatgcatcg gctgcgagga cgcctcgcgg gccagcggcc agaccctgcg 3181 cgctatcgcc gaggtcgcgc agaatgcgcc ggccgcccgc ctgcgctatg ccgatacggt 3241 cggcctgctc gaccctttta ccaccgcggc gcaaatctcg gccctgcgcg acgtctggtc 3301 cggcgaaatc gaaatgcatg cccataacga tctgggtatg gcgaccgcca atacgctggc 3361 ggcggtaagc gccggggcca ccagcgtgaa tacgacggtc ctcggtctcg gcgagcgggc 3421 gggcaacgcg gccgcatgga aaccgtccgc gctgggcctt gaacgctgcc tgggcgtgga 3481 gaccggcgtg catttttcgg cgctgcccgc gctctgtcag agggtcgcgg aagccgcgca 3541 gcgcgccatc gacccgcagc agccgctggt cggcgagctg gtgtttaccc atgagtcagg 3601 tgtccacgtg gcggcgctgc tgcgcgacag cgagagctac cagtccatcg ccccttccct 3661 gatgggccgc agctaccggc tggtgctggg caaacactcc gggcgtcagg cggtcaacgg 3721 cgtttttgac cagatgggct atcacctcaa cgccgcgcag attaaccagc tgctgcccgc 3781 catccgccgc ttcgccgaga actggaagcg cagcccgaaa gattacgagc tggtggctat 3841 ctacgacgag ctgtgcggtg aatccgctct gcgggcgagg gggtaatgat ggagtggttt 3901 tatcaaattc ccggcgtgga cgaacttcgc tccgccgaat ctttttttca gtttttcgcc 3961 gtcccctatc agcccgagct gcttggccgc tgcagcctgc cggtgctggc aacgtttcat 4021 cgcaaactcc gcgcggaggt gccgctgcaa aaccggctcg aggataacga ccgcgcgccc 4081 tggctgctgg cgcgaagact gctcgcggag agctatcagc aacagtttca ggagagcgga 4141 acatgagacc gaaattcacc //