LOCUS X07794 6172 bp DNA linear BCT 12-SEP-1993 DEFINITION M. thermoautotrophicum mcr genes for methyl-CoM reductase. ACCESSION X07794 M18969 VERSION X07794.1 KEYWORDS mcr genes; methyl-CoM reductase. SOURCE Methanothermobacter thermautotrophicus ORGANISM Methanothermobacter thermautotrophicus Archaea; Euryarchaeota; Methanomada group; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter. REFERENCE 1 (bases 1 to 6172) AUTHORS Bokranz M. JOURNAL Submitted (30-MAY-1988) to the INSDC. M. Bokranz, Philipps Uni. Marburg, FB Biologie/Molekulargenetik, Karl von Frisch Str., 3550 Marburg, FRG. REFERENCE 2 (bases 746 to 6172) AUTHORS Bokranz M., Baeumner G., Allmansberger R., Ankel-Fuchs D., Klein A. TITLE Cloning and characterization of the methyl coenzyme M reductase genes from Methanobacterium thermoautotrophicum JOURNAL J. Bacteriol. 170(2), 568-577(1988). PUBMED 2448287 REFERENCE 3 AUTHORS Knaub S., Klein A. TITLE Specific transcription of cloned Methanobacterium thermoautotrophicum transcription units by homologous RNA polymerase in vitro JOURNAL Nucleic Acids Res. 18(6), 1441-1446(1990). PUBMED 2183193 FEATURES Location/Qualifiers source 1..6172 /organism="Methanothermobacter thermautotrophicus" /strain="Marburg." /mol_type="genomic DNA" /db_xref="taxon:145262" mRNA 1063..6041 /note="mcr mRNA" CDS 1171..2502 /transl_table=11 /note="MCR beta-subunit (AA 1-443)" /db_xref="GOA:P11560" /db_xref="InterPro:IPR003179" /db_xref="InterPro:IPR008924" /db_xref="InterPro:IPR009024" /db_xref="InterPro:IPR015823" /db_xref="InterPro:IPR022679" /db_xref="InterPro:IPR022680" /db_xref="PDB:1HBM" /db_xref="PDB:1HBN" /db_xref="PDB:1HBO" /db_xref="PDB:1HBU" /db_xref="PDB:1MRO" /db_xref="PDB:3M1V" /db_xref="PDB:3M2R" /db_xref="PDB:3M2U" /db_xref="PDB:3M2V" /db_xref="PDB:3M30" /db_xref="PDB:3M32" /db_xref="PDB:3POT" /db_xref="PDB:5A0Y" /db_xref="PDB:5G0R" /db_xref="UniProtKB/Swiss-Prot:P11560" /protein_id="CAA30635.1" /translation="MAKFEDKVDLYDDRGNLVEEQVPLEALSPLRNPAIKSIVQGIKR TVAVNLEGIENALKTAKVGGPACKIMGRELDLDIVGNAESIAAAAKEMIQVTEDDDTN VELLGGGKRALVQVPSARFDVAAEYSAAPLVTATAFVQAIINEFDVSMYDANMVKAAV LGRYPQSVEYMGANIATMLDIPQKLEGPGYALRNIMVNHVVAATLKNTLQAAALSTIL EQTAMFEMGDAVGAFERMHLLGLAYQGMNADNLVFDLVKANGKEGTVGSVIADLVERA LEDGVIKVEKELTDYKVYGTDDLAMWNAYAAAGLMAATMVNQGAARAAQGVSSTLLYY NDLIEFETGLPSVDFGKVEGTAVGFSFFSHSIYGGGGPGIFNGNHIVTRHSKGFAIPC VAAAMALDAGTQMFSPEATSGLIKEVFSQVDEFREPLKYVVEAAAEIKNEI" CDS 2534..2947 /transl_table=11 /note="ORF 1 (AA 1-137)" /db_xref="GOA:P11564" /db_xref="InterPro:IPR003901" /db_xref="UniProtKB/Swiss-Prot:P11564" /protein_id="CAA30636.1" /translation="MDVQIFPHRLLGADTTEKLLNRLEDIHGVKRMVIHGQRLPPEDH PDRRIINVKGQEFELQVKTGRVLLEVEDEETITDIKRVCEDLLPFGYDVTPGKYIRTE KTVTDEIKYGESLMRFLMNSSVSRIRTPGSVKGPQ" CDS 2971..3567 /transl_table=11 /note="ORF 2(AA 1-198)" /db_xref="GOA:P11566" /db_xref="InterPro:IPR007687" /db_xref="UniProtKB/Swiss-Prot:P11566" /protein_id="CAA30637.1" /translation="MIGKCTHVVDCRETMGMGEGGGIAQRGTFAQCGSEVLAVAMSPG RRHITKPVCEITFALREANIMTSTLVLNAGAGVPQDAPSAGAGSLFGLTPAEVEQMKR HRLLVVHLGGVKNHITYKARLILRNVDRPCIVICEYPVDFEDFAKIGVKTRVVMPDEP KTKGTIVDIVSGVIRGETCPQEKLDEIIRKVKLALGGA" CDS 3569..4318 /transl_table=11 /note="MCR gamma-subunit (AA 1-249)" /db_xref="GOA:P11562" /db_xref="InterPro:IPR003178" /db_xref="InterPro:IPR009024" /db_xref="InterPro:IPR036994" /db_xref="PDB:1HBM" /db_xref="PDB:1HBN" /db_xref="PDB:1HBO" /db_xref="PDB:1HBU" /db_xref="PDB:1MRO" /db_xref="PDB:3M1V" /db_xref="PDB:3M2R" /db_xref="PDB:3M2U" /db_xref="PDB:3M2V" /db_xref="PDB:3M30" /db_xref="PDB:3M32" /db_xref="PDB:3POT" /db_xref="PDB:5A0Y" /db_xref="PDB:5G0R" /db_xref="UniProtKB/Swiss-Prot:P11562" /protein_id="CAA30638.1" /translation="MAQYYPGTTKVAQNRRNFCNPEYELEKLREISDEDVVKILGHRA PGEEYPSVHPPLEEMDEPEDAIREMVEPIDGAKAGDRVRYIQFTDSMYFAPAQPYVRS RAYLCRYRGADAGTLSGRQIIETRERDLEKISKELLETEFFDPARSGVRGKSVHGHSL RLDEDGMMFDMLRRQIYNKDTGRVEMVKNQIGDELDEPVDLGEPLDEETLMEKTTIYR VDGEAYRDDVEAVEIMQRIHVLRSQGGFNLE" CDS 4338..5990 /transl_table=11 /note="MCR alpha-subunit (AA 1-550)" /db_xref="GOA:P11558" /db_xref="InterPro:IPR003183" /db_xref="InterPro:IPR008924" /db_xref="InterPro:IPR009024" /db_xref="InterPro:IPR009047" /db_xref="InterPro:IPR015811" /db_xref="InterPro:IPR015823" /db_xref="InterPro:IPR016212" /db_xref="PDB:1HBM" /db_xref="PDB:1HBN" /db_xref="PDB:1HBO" /db_xref="PDB:1HBU" /db_xref="PDB:1MRO" /db_xref="PDB:3M1V" /db_xref="PDB:3M2R" /db_xref="PDB:3M2U" /db_xref="PDB:3M2V" /db_xref="PDB:3M30" /db_xref="PDB:3M32" /db_xref="PDB:3POT" /db_xref="PDB:5A0Y" /db_xref="PDB:5G0R" /db_xref="UniProtKB/Swiss-Prot:P11558" /protein_id="CAA30639.1" /translation="MADKLFINALKKKFEESPEEKKTTFYTLGGWKQSERKTEFVNAG KEVAAKRGIPQYNPDIGTPLGQRVLMPYQVSTTDTYVEGDDLHFVNNAAMQQMWDDIR RTVIVGLNHAHAVIEKRLGKEVTPETITHYLETVNHAMPGAAVVQEHMVETHPALVAD SYVKVFTGNDEIADEIDPAFVIDINKQFPEDQAETLKAEVGDGIWQVVRIPTIVSRTC DGATTSRWSAMQIGMSMISAYKQAAGEAATGDFAYAAKHAEVIHMGTYLPVRRARGEN EPGGVPFGYLADICQSSRVNYEDPVRVSLDVVATGAMLYDQIWLGSYMSGGVGFTQYA TAAYTDNILDDFTYFGKEYVEDKYGLCEAPNNMDTVLDVATEVTFYGLEQYEEYPALL EDQFGGSQRAAVVAAAAGCSTAFATGNAQTGLSGWYLSMYLHKEQHSRLGFYGYDLQD QCGASNVFSIRGDEGLPLELRGPNYPNYAMNVGHQGEYAGISQAPHAARGDAFVFNPL VKIAFADDNLVFDFTNVRGEFAKGALREFEPAGERALITPAK" BASE COUNT 1805 a 1508 c 1568 g 1291 t ORIGIN 1 gcctcgcccc cgatttcagg gaggatctca aggtactccc tgcttgagtc atctgcaagg 61 acaaatggag tcccgttttc agggtcgcag acaggtgtcc ctgtaaccct gagattgaac 121 tcttggtcaa ccatcctcac aaggtcctca aattcctgga ctgtgtgcgg ctctataccc 181 tcaattattg gcccattgcc gagtatcagc ccctgatgct catagtttgc aaatcgcatc 241 attatgaatc ctgtggcccc ccattcctca agtctggagc aggtttcaag gaggtcatca 301 tcatcattca caccgggtat gatcaccgct gcagcgtgga cctcacagga ttctcaggat 361 atcctgaggg cttccggtgc attttcggcg ttcctatcgc gcatccactc tctcctcagg 421 agggggttcg ctgagaagac agtgaaggtt acctcatcca caccatttcc aatgagcctg 481 atgccagctc agggtcatcc atgcccttac cgcttgtgta tcccaggtgt atggggatct 541 caaatccact aagtcccgct gtcagctcct caaggtgggg gtagcagctc acatcacccc 601 cgccgctgat gtttatcttc aggtccttat cctgaaggtt ctgcatcata agtgttgtct 661 gcacattacc catgacaagg aatgggggta aaaattccct tcccctctct gcaacatctc 721 ttccacaggt tcacagccca cccttcccgg gagcagttcc tgcagccgaa gggttcaaat 781 tctcccacct ttctgaagta acagtacctg cagaatcccc tgcagtcctt gccaggtata 841 ccacccaaat ccgctattat ctgcatgtcc ctctttctgt gctgcgcctt aaatataatt 901 tattaccctg cagccatcat acctgcggtg tgcatgatca taaaaatcaa cgcagccgta 961 caaaaaatcc ataaaacccg aagaaaacgt gttgatacat ataaatcttt cgacttgatt 1021 cagaaagaaa tcttaattaa ttatgatcaa gttaaatatg caccgtatac taaaacgggt 1081 gttttaacac cctccaaggg ccttcttgcc tttcctgaaa agggggtctt ggatgtttag 1141 tatacggaac tgattgttag gagggaaaaa atggcgaagt ttgaggataa ggtcgacttg 1201 tacgacgaca gaggcaacct cgtcgaagaa caggtgccat tagaagctct aagtccatta 1261 aggaaccccg ccattaaaag catagtgcag gggattaaaa ggacagtggc tgtgaacctt 1321 gaaggtatag aaaacgccct gaagacagcg aaggtcggcg gacctgcctg taagataatg 1381 ggccgtgaac tcgacctcga cattgtcggg aacgccgagt caatagcagc cgctgcaaag 1441 gaaatgatac aggtgactga ggacgacgac accaacgtcg aactccttgg cggaggtaaa 1501 agggcactcg tacaggtccc aagtgcaagg ttcgatgttg cagcagaata ctctgcagca 1561 ccactcgtaa ccgccacagc atttgtccag gccataatca acgagtttga tgttagcatg 1621 tacgatgcta acatggttaa agcagccgtt ctgggaagat atccacagtc tgtggagtac 1681 atgggggcaa acatagcaac aatgctggac attccacaga aactggaagg cccaggatac 1741 gcactcagga acatcatggt gaaccatgtt gttgcagcca cactcaaaaa cacactccag 1801 gcagcagcac tatcaaccat acttgaacag acagcaatgt tcgagatggg tgatgctgta 1861 ggagcatttg agaggatgca cctccttgga cttgcatacc agggaatgaa cgctgacaac 1921 ctggtctttg acctcgttaa ggccaacggt aaagaaggta cagttggatc agtcatagca 1981 gacctggttg aaagggccct ggaagacggt gtcataaagg ttgagaagga actcacagac 2041 tacaaggtct acggcacaga cgaccttgca atgtggaacg cctacgcagc agccggactc 2101 atggcagcca caatggttaa ccagggtgca gcaagggcag ctcagggtgt atcatcaact 2161 ctgctctact acaacgacct catagaattc gaaacaggac tgccaagcgt ggacttcggt 2221 aaagtggaag gtacagctgt aggattttca ttcttcagcc actccatcta cggtggtggt 2281 ggaccaggta tcttcaacgg aaaccacatc gttacaaggc acagtaaggg attcgctata 2341 ccctgcgtgg cagccgcaat ggcactggat gcaggaaccc agatgttctc accagaagca 2401 acctctggac tcataaaaga agtattcagc caggttgacg agttccgaga accactcaaa 2461 tatgttgtgg aggcagcagc tgagattaaa aacgaaatct aaataatctc tcagaactgg 2521 gggcaaaaaa ccaatggacg ttcagatatt tcctcacagg ctgctagggg ccgacaccac 2581 agagaaactc cttaaccgcc ttgaggacat ccacggcgtt aagcgaatgg tgatccacgg 2641 acagagacta ccaccggagg accaccctga caggcgcata atcaacgtta aaggccagga 2701 atttgaactt caggttaaaa ctggccgtgt gctgcttgaa gtggaggacg aggagacaat 2761 aacggatatc aagagggttt gcgaggatct cctgcccttt ggatatgatg ttactcccgg 2821 caagtacata agaacagaga aaaccgtcac agacgagata aagtacggcg agagcctgat 2881 gagattcctg atgaactcat cggtctcacg gatcagaacg ccaggctcag tgaaagggcc 2941 acaataataa aaaggaagaa ggagcattag atgatcggaa agtgcactca cgtggttgac 3001 tgtagagaga caatgggtat gggtgaaggc ggaggaatag cccagagggg tacctttgcc 3061 cagtgcggaa gtgaagttct ggcagtggca atgtcacctg gcaggcgcca cataaccaag 3121 cctgtctgcg agataacatt tgccctgagg gaagcaaaca taatgaccag taccctggta 3181 ctcaacgcag gcgcaggggt tccacaggac gctccaagtg ccggtgcagg gagcctcttt 3241 ggattaacac ctgctgaagt cgagcagatg aagcggcaca gactccttgt ggtgcacctt 3301 ggcggagtaa agaaccacat cacctacaag gcacgcctca tactcagaaa tgttgaccgc 3361 ccatgcatag tcatatgcga atacccggtt gactttgagg actttgcgaa gataggtgtc 3421 aaaaccaggg tcgtaatgcc ggatgaacca aaaaccaagg gaacaatcgt tgacatcgtg 3481 agtggagtta ttagaggaga aacctgtccc caggaaaaac tggatgagat tataagaaag 3541 gttaagttag ctttaggagg tgcatgatat ggcacaatac tatcccggaa caactaaggt 3601 tgctcagaac agaaggaatt tctgtaaccc tgaatacgaa cttgaaaaac tgagagaaat 3661 ctcagatgaa gatgtagtaa agattctggg tcacagggcc ccaggggaag aatacccaag 3721 tgttcaccca ccacttgaag agatggatga accagaggac gcaataagag aaatggtcga 3781 accaatagac ggtgcaaagg ccggtgacag ggtcagatac atacagttca cagactcaat 3841 gtacttcgcc ccagcccagc catatgtgag gtcaagggca tacctctgca ggtacagggg 3901 tgcagacgca ggtacactct caggacgtca gatcatagag accagggaga gggaccttga 3961 aaagatatcc aaggaactcc ttgaaacaga gttctttgac cctgcaaggt caggtgtcag 4021 gggtaaatct gtccacggac actcactgcg tctcgatgaa gacggtatga tgttcgacat 4081 gctcagaagg cagatctaca acaaggacac aggcagagtc gaaatggtca agaaccagat 4141 cggtgacgaa ctcgacgaac ccgtggatct tggtgaacca ctggatgaag aaaccctgat 4201 ggaaaaaaca accatctacc gcgtggatgg tgaagcctac cgtgatgatg tagaagccgt 4261 ggagatcatg cagagaatcc acgttttaag atcacaagga gggttcaacc tagaataatc 4321 cgggggaggt gtagattatg gctgacaaat tgttcataaa tgctttaaag aaaaaatttg 4381 aagaatcccc tgaagagaag aaaaccacat tctacacact tggtggctgg aaacagtcag 4441 aaagaaaaac cgagtttgtg aacgctggta aagaagtggc agcaaagagg ggtatacccc 4501 agtataaccc tgacataggt accccacttg gtcagagggt gctcatgccc taccaggttt 4561 caacaaccga cacctatgtt gaaggggacg acctccactt cgtgaacaac gctgccatgc 4621 agcagatgtg ggacgacata aggaggaccg ttatcgtcgg tctgaaccac gcccacgctg 4681 ttatagaaaa gaggctgggt aaggaggtca cacctgagac aataacccac taccttgaaa 4741 cagtgaacca cgcaatgccg ggtgcagctg tcgtccagga acacatggtg gaaacccacc 4801 ctgcactggt ggcagacagt tacgtcaagg tattcacagg taacgacgaa atagcagatg 4861 aaatcgaccc tgcattcgtc atagacatca acaaacagtt cccagaggac caggcagaaa 4921 ccctcaaggc agaggttggt gacggaatct ggcaggtcgt caggatccca accatagtct 4981 caaggacctg tgacggtgca acaacctcac gatggtccgc catgcagata ggtatgtcca 5041 tgatttcagc ctacaaacag gcagcaggtg aagccgcaac aggtgacttc gcatacgctg 5101 caaaacacgc tgaagtcata cacatgggta catacctgcc tgtgagacgt gcaaggggtg 5161 aaaacgagcc tggtggtgta ccattcggtt accttgcaga catctgtcag agctcaaggg 5221 tcaactatga ggaccctgtc agggtgtcac ttgacgttgt ggcaaccggt gcaatgctct 5281 acgaccagat ctggctagga tcatacatgt caggtggtgt cggattcaca cagtacgcca 5341 cagcagcata cacagacaac atacttgacg acttcaccta cttcggtaag gagtacgtgg 5401 aagacaagta cggactctgt gaggcaccaa acaacatgga caccgtcctg gacgttgcaa 5461 ctgaggtcac attctacggc cttgaacagt acgaggaata cccagcactc ctcgaagacc 5521 agttcggtgg atcacagagg gcagcagtcg ttgcagctgc agctggatgt tcaacagcat 5581 tcgcaacagg aaacgcccag acaggtctca gcggatggta cctctcaatg tacctccaca 5641 aagaacagca ctcaaggctc ggattctacg gttacgacct ccaggaccag tgtggtgcat 5701 ccaacgtctt ctcaataagg ggcgacgagg gactgccact ggagcttcgt ggacctaact 5761 atccaaacta cgccatgaac gtgggacacc agggtgaata cgcaggtata tcacaggcac 5821 cacacgctgc ccgtggagac gccttcgtgt tcaacccact ggtgaaaata gcctttgcag 5881 acgacaacct tgtcttcgac ttcaccaacg tccgtggcga attcgccaaa ggtgctctgc 5941 gagagttcga accagccggt gaaagagcac tcataacacc cgcaaaatag attaacgaag 6001 gtgcattaca caaacttttt aagtgtaatg cacctaattt tttttattca aaaaaataaa 6061 aggaggaaga aatatggacc ctatgataac aggtttaggt gttgtagctc tcatgggtgc 6121 agctgcaacc atagcaggag ccgcagagga cttagagtct gacgtaggat cc //