LOCUS X02405 2142 bp DNA linear BCT 23-OCT-2008 DEFINITION E. coli relB gene region. ACCESSION X02405 VERSION X02405.1 KEYWORDS inverted repeat; unidentified reading frame. SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 2142) AUTHORS Bech F.W., Jorgensen S.T., Diderichsen B., Karlstroem O.H. TITLE Sequence of the relB transcription unit from Escherichia coli and identification of the relB gene JOURNAL EMBO J. 4(4), 1059-1066(1985). PUBMED 2990907 COMMENT Data kindly reviewed (24-FEB-1986) by Karlstroem O.H. FEATURES Location/Qualifiers source 1..2142 /organism="Escherichia coli" /mol_type="genomic DNA" /db_xref="taxon:562" misc_feature 457..482 /note="region of dyad symmetry" repeat_region 457..464 /note="inverted repeat A" misc_feature 463..464 /note="transcription initiation site" misc_feature 466..473 /note="region of dyad symmetry" repeat_region 466..468 /note="inverted repeat B" repeat_region 471..473 /note="inverted repeat B'" repeat_region 475..482 /note="inverted repeat A'" CDS 494..733 /transl_table=11 /note="relB protein (aa 1-79)" /db_xref="GOA:P0C079" /db_xref="InterPro:IPR007337" /db_xref="InterPro:IPR013321" /db_xref="PDB:2K29" /db_xref="PDB:2KC8" /db_xref="PDB:4FXE" /db_xref="UniProtKB/Swiss-Prot:P0C079" /protein_id="CAA26250.1" /translation="MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERL PFKQTLLSDEDAELVEIVKERLRNPKPVRVTLDEL" variation 608..608 /note="G is A in relB 101" variation 626..626 /note="C is A in relB 35" variation 627..627 /note="C is T in relB 102" CDS 733..1020 /transl_table=11 /note="relE protein (aa 1-95)" /db_xref="GOA:P0C077" /db_xref="InterPro:IPR007712" /db_xref="InterPro:IPR035093" /db_xref="PDB:2KC8" /db_xref="PDB:2KC9" /db_xref="PDB:4FXE" /db_xref="PDB:4FXH" /db_xref="PDB:4FXI" /db_xref="PDB:4V7J" /db_xref="PDB:4V7K" /db_xref="UniProtKB/Swiss-Prot:P0C077" /protein_id="CAA26251.1" /translation="MAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKL RGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGKRERSEVYSEAVKRIL" variation 865..865 /note="C is T in pBD3050" CDS 1092..1247 /transl_table=11 /note="relF protein (aa 1-51)" /db_xref="GOA:P0ACG6" /db_xref="InterPro:IPR000021" /db_xref="InterPro:IPR018084" /db_xref="UniProtKB/Swiss-Prot:P0ACG6" /protein_id="CAA26252.1" /translation="MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTDQTEVAVF TAYEPEE" misc_feature 1306..1332 /note="pot. stem-loop structure" repeat_region 1306..1311 /note="inverted repeat B" misc_feature 1317..1332 /note="pot. stem-loop structure" repeat_region 1317..1322 /note="inverted repeat B" repeat_region 1327..1332 /note="inverted repeat B'" misc_feature 1331..1335 /note="transcription termination region" misc_feature 1332..1347 /note="imperfect T stretch" CDS 1464..1715 /transl_table=11 /note="rem protein (aa 1-83)" /db_xref="InterPro:IPR016418" /db_xref="UniProtKB/Swiss-Prot:P07010" /protein_id="CAA26253.1" /translation="MMNIEELRKIFCEDGLYAVCVENGNLVSHYRIMCLRKNGAALIN FVDARVTDGFILREGEFVTSLQALKEIGIKAGFSAFSGE" BASE COUNT 559 a 479 c 552 g 552 t ORIGIN 1 cttaatttca ggccccatcg gatcacacat ggagagtttt tatgaataac cccgtctgtc 61 ttgatgactg gttgattggc tttaaaagct tgttgacagg ggtaaacgtt cggcaataat 121 tttctgccgc atgcgggtgt tgcataaaac gtgttacgtt cctttatcga caggtcaggt 181 caccgctcac ccgccgacga gaaagcaaca ctgacatgct aaagcaaaaa atagatgaat 241 aagttgagtt gtgcatatgt agcctgaccg tcacaaagta tatggtgtct gtaccagtaa 301 gatgatggcc ggactcttta aaaacgagct gacctgcaca atacaggatg gacttagcaa 361 tggctgctcc tggcacaaag cggacagtga tcaccgttct tacgactact ttctgacttc 421 cttcgtgact tgccctaagc atgttgtagt gcgatacttg taatgacatt tgtaattaca 481 agaggtgtaa gacatgggta gcattaacct gcgtattgac gatgaactta aagcgcgttc 541 ttacgccgcg cttgaaaaaa tgggtgtaac tccttctgaa gcgcttcgtc tcatgctcga 601 gtatatcgct gacaatgaac gcttgccgtt caaacagaca ctcctgagtg atgaagatgc 661 tgaacttgtg gagatagtga aagaacggct tcgtaatcct aagccagtac gtgtgacgct 721 ggatgaactc tgatggcgta ttttctggat tttgacgagc gggcactaaa ggaatggcga 781 aagctgggct cgacggtacg tgaacagttg aaaaagaagc tggttgaagt acttgagtca 841 ccccggattg aagcaaacaa gctccgtggt atgcctgatt gttacaagat taagctccgg 901 tcttcaggct atcgccttgt ataccaggtt atagacgaga aagttgtcgt tttcgtgatt 961 tctgttggga aaagagaacg ctcggaagta tatagcgagg cggtcaaacg cattctctga 1021 accaaagcat gacatctctg tttcgcaccg aaggtgacac ttctgctttg cgttgacagg 1081 agaagcaggc tatgaagcag caaaaggcga tgttaatcgc cctgatcgtc atctgtttaa 1141 ccgtcatagt gacggcactg gtaacgagga aagacctctg cgaggtacga atccgaaccg 1201 accagacgga ggtcgctgtc ttcacagctt acgaacctga ggagtaagag acccggcggg 1261 ggagaaatcc ctcgccacct ctgatgtggc aggcatcctc aacgcacccg cacttaaccc 1321 gcttcggcgg gtttttgttt ttattttcaa cgcgtttgaa gttctggacg gtgccggaat 1381 agaatcaaaa atacttaagt agcgcgcagg gataagaggg atggtccctt aaaggggaga 1441 gctaattatc cggaaggatt ctgatgatga acatcgaaga actgcgtaaa attttttgtg 1501 aagatggcct ctatgctgtg tgcgttgaaa atggaaatct tgttagtcat taccgcatta 1561 tgtgtttgcg aaagaatggg gctgcgttaa ttaattttgt ggatgctcgg gtcacggacg 1621 gatttatctt gcgcgaaggt gagtttgtca cttcattaca ggcattgaaa gagatcggaa 1681 taaaagctgg cttttctgct ttttcaggag aataaactca tctacaatct tgcgcggggc 1741 tgaactcccg ctgagtaaca ccgtgccacc ggagaaaacc gatggcacgc aacgcaaaat 1801 attacaattc tgataattcg cccgttcttg cctgcacgca cgggcggtat tctcacgcat 1861 tcaagtctga atggttccag caccctccat gcactgcaga acagccgaat ggctgattca 1921 ttcttaccgc aggcgcgggt tcgaggttaa gaaagctctc agtctcgact atcggcactg 1981 gataatctct gtcaggctgc cttattccga acgcccacca cgtgcgtccc gcacttccag 2041 caacggatct ggaggtaacg tgcgggtatt acttagacct gttctggtgc ctgagcttgg 2101 gccggtggac ccttaagccg ggccgtgaat ccatacagat at //