LOCUS AH005461 3327 bp DNA linear ROD 10-JUN-2016 DEFINITION Mus musculus strain 129/J CTP:phosphocholine cytidylyltransferase (Ctpct) gene, complete cds. ACCESSION AH005461 U84199 U84200 U84201 U84202 U84203 U84204 U84205 U84206 U84207 VERSION AH005461.2 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 3327) AUTHORS Tang,W., Keesler,G.A. and Tabas,I. TITLE The structure of the gene for murine CTP:phosphocholine cytidylyltransferase, Ctpct. Relationship of exon structure to functional domains and identification of transcriptional start sites and potential upstream regulatory elements JOURNAL J. Biol. Chem. 272 (20), 13146-13151 (1997) PUBMED 9148929 REFERENCE 2 (bases 1 to 3327) AUTHORS Tang,W. TITLE Direct Submission JOURNAL Submitted (08-JAN-1997) Medicine, Columbia University, 630W 168th St., New York, NY 10032, USA COMMENT On or before Jun 10, 2016 this sequence version replaced U84199.1, U84200.1, U84201.1, U84202.1, U84203.1, U84204.1, U84205.1, U84206.1, U84207.1, AH005461.1. FEATURES Location/Qualifiers source 1..3327 /organism="Mus musculus" /mol_type="genomic DNA" /strain="129/J" /db_xref="taxon:10090" gene 1..3327 /gene="Ctpct" regulatory <1..600 /regulatory_class="promoter" /gene="Ctpct" mRNA join(601..672,823..949,1100..1199,1350..1466,1617..1768, 1919..1997,2148..2290,2441..2629,2780..3327) /gene="Ctpct" /product="CTP:phosphocholine cytidylyltransferase" 5'UTR join(601..672,823..832) /gene="Ctpct" exon 601..672 /gene="Ctpct" /number=1 intron 673..>697 /gene="Ctpct" /number=1 gap 698..797 /estimated_length=unknown intron <798..822 /gene="Ctpct" /number=1 exon 823..949 /gene="Ctpct" /number=2 CDS join(833..949,1100..1199,1350..1466,1617..1768,1919..1997, 2148..2290,2441..2629,2780..2986) /gene="Ctpct" /codon_start=1 /product="CTP:phosphocholine cytidylyltransferase" /protein_id="AAB63446.1" /translation="MDAQSSAKVNSRKRRKEAPGPNGATEEDGIPSKVQRCAVGLRQP APFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNL FPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAE HRIDFVAHDDIPYSSAGSDDVYKHIKDAGMFAPTQRTEGISTSDIITRIVRDYDVYAR RNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIQ KWEEKSREFIGSFLEMFGPEGALKHMLKEGKGRMLQAISPKQSPSSSPTHERSPSPSF RWPFSGKTSPSSSPASLSRCRAVTCDISEDEED" intron 950..>974 /gene="Ctpct" /number=2 gap 975..1074 /estimated_length=unknown intron <1075..1099 /gene="Ctpct" /number=2 exon 1100..1199 /gene="Ctpct" /number=3 intron 1200..>1224 /gene="Ctpct" /number=3 gap 1225..1324 /estimated_length=unknown intron <1325..1349 /gene="Ctpct" /number=3 exon 1350..1466 /gene="Ctpct" /number=4 intron 1467..>1491 /gene="Ctpct" /number=4 gap 1492..1591 /estimated_length=unknown intron <1592..1616 /gene="Ctpct" /number=4 exon 1617..1768 /gene="Ctpct" /number=5 intron 1769..>1793 /gene="Ctpct" /number=5 gap 1794..1893 /estimated_length=unknown intron <1894..1918 /gene="Ctpct" /number=5 exon 1919..1997 /gene="Ctpct" /number=6 intron 1998..>2022 /gene="Ctpct" /number=6 gap 2023..2122 /estimated_length=unknown intron <2123..2147 /gene="Ctpct" /number=6 exon 2148..2290 /gene="Ctpct" /number=7 intron 2291..>2315 /gene="Ctpct" /number=7 gap 2316..2415 /estimated_length=unknown intron <2416..2440 /gene="Ctpct" /number=7 exon 2441..2629 /gene="Ctpct" /number=8 intron 2630..>2654 /gene="Ctpct" /number=8 gap 2655..2754 /estimated_length=unknown intron <2755..2779 /gene="Ctpct" /number=8 exon 2780..3327 /gene="Ctpct" /number=9 3'UTR 2987..3327 /gene="Ctpct" regulatory 3308..3313 /regulatory_class="polyA_signal_sequence" /gene="Ctpct" BASE COUNT 613 a 622 c 677 g 615 t ORIGIN 1 ccgttaatta gtccagaagg tacccattat gcctcgggaa caaatttaga tgtttgtgtg 61 tgtgtgttgt ggggggggat tcgcccaaac aaatccccca aaagtcacgt aggaagttgt 121 tcctagatac agctccttgt gtggcatttt tgccctcgct tgtagtcctg tccaatagtt 181 cccgggtcga tttctaggtc gttttctgat gagtcaaccc aggtcggaat aactggcaga 241 cagaggatga ggtcagaccc gagctcgcct gaccgagccg gcgggctcga agtcctcggg 301 gaggtcggac atcggagccc cagccctgcg gagaaggcga ggggcagcgg gcgcagggga 361 cgccgggaga ccggcggcag gaggcgccac acatccggaa ttccgagccc gccgaccccg 421 cgcctgcgtc cagcgttcgg ctcagtcacc ccacgcgccc ggcccctctg gaagcggaac 481 tactctgtca ggttgtggtt ttcaggaatg cggaggtggc attgacaaga gggcgggcgg 541 gaggcgggac ttccggtccg cagtccggtc agatgtttcc cgggcgtctc cccgcaaccc 601 atttgacttc gctagtcggt gacgcggcgc ggggaaggga tccgaggggg accggagcct 661 ggaggagttg aggtaaggaa actccgggta gtgggtgnnn nnnnnnnnnn nnnnnnnnnn 721 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 781 nnnnnnnnnn nnnnnnncac cacccccttt ttttttgagc agttaaaaga agatggatgc 841 acagagttca gctaaagtca attcgaggaa gaggaggaaa gaggcacctg gccctaatgg 901 agcaacagag gaagatggaa ttccttccaa agtgcagcgt tgcgcagttg tgaattgagg 961 atttgtgact ggcannnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1021 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnntttaac 1081 ttaatttttt cttgttcagg gtttacggca gccagctcct ttttctgatg aaattgaagt 1141 tgactttagt aagccctatg tcagggtgac tatggaagaa gcctgcaggg gaactccgtg 1201 taagttaact gcttaactgt tttannnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1261 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1321 nnnnaatgag tttttttgtt tggatttagg tgagcggcct gtgagagttt atgcggatgg 1381 aatatttgac ttgtttcact ctggtcatgc ccgggctctg atgcaagcaa agaacctttt 1441 ccctaatacg tatctaattg tgggaggtaa gaaacctaat acgtatctaa tnnnnnnnnn 1501 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1561 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nacaactgtg tgatgctgtg atgcagtctg 1621 cagtgatgag ctaacgcaca acttcaaggg cttcactgtg atgaacgaga atgagcgcta 1681 tgacgccgtg cagcactgcc gctacgtgga cgaggtggtg cggaacgccc cctggactct 1741 gacgcctgag ttcctggcag agcaccgggt aagactggcc gcaagtaatc attnnnnnnn 1801 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1861 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnaaaatga agttttcttg ttttccagat 1921 tgattttgtc gcccatgacg acatccccta ttcttctgca gggagcgatg atgtgtataa 1981 gcacatcaag gacgcaggtg agtgatccac gcccagctcc acnnnnnnnn nnnnnnnnnn 2041 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2101 nnnnnnnnnn nnnnnnnnnn nntttgtctg tttgtgtttt tctttaggca tgtttgctcc 2161 cacacagagg acagaaggta tctccacatc agacatcatc acccgcattg tccgtgacta 2221 tgatgtgtat gcaagacgga acctacagag gggctacact gccaaggagc tcaatgtcag 2281 ctttatcaac gtgagttaca gcctcgcccc atagcnnnnn nnnnnnnnnn nnnnnnnnnn 2341 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2401 nnnnnnnnnn nnnnntacaa ttcatttgtc tcctgtctag gagaagaaat accacttgca 2461 agaacgagtt gataaagtaa agaagaaagt gaaagatgtg gaggaaaagt caaaagagtt 2521 tgtgcagaag gtggaagaga agagcatcga cctcatccag aagtgggagg agaagtcccg 2581 agagttcatt ggaagtttcc tggaaatgtt tggtccagaa ggagcactgg tgcgagcctt 2641 tcttcctgac acttnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2701 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnntcttcc 2761 ttttggtctc ctcccccaga agcacatgct gaaggaggga aaaggtcgga tgctgcaggc 2821 catcagtccc aagcagagcc ccagcagcag ccctactcat gagcgctccc cctccccctc 2881 ctttcggtgg cccttctctg gcaagacttc cccatcttcc tccccagcaa gtctttctag 2941 gtgcagggct gtgacctgtg acatcagcga ggatgaagag gactaacttt tcatccctgt 3001 tccctctctc ccccactgcc catcacctcc agaagctctc tgtcgaattc cattttgtga 3061 tcccaacact aaacctaagg acatctacaa agaaaagaca accggggcaa gaggacctgg 3121 gaatggggaa ccaaaacagc ccatgccctg agacattctc agccacacca aggaggctgc 3181 ccatacctta gaagcctgct ctgcatccat cttccctccc cagaactttg ctttactgtt 3241 tatgctcatg taatcttgac agggaaattg tcatttttat caattttttt taaaaagtag 3301 tctttcaaat atagtaagta gaactaa //