LOCUS BBU62901 4239 bp DNA linear BCT 12-JUL-1997 DEFINITION Borrelia burgdorferi thdF gene, partial cds, putative motility protein (flbF), flagellar hook associated proteins FlgK (flgK) and FlgL (flgL) genes, complete cds. ACCESSION U62901 VERSION U62901.1 KEYWORDS . SOURCE Borreliella burgdorferi (Borrelia burgdorferi) ORGANISM Borreliella burgdorferi Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella. REFERENCE 1 (bases 1 to 4239) AUTHORS Ge,Y., Old,I.G., Girons,I.S. and Charon,N.W. TITLE The flgK motility operon of Borrelia burgdorferi is initiated by a sigma 70-like promoter JOURNAL Microbiology 143 (Pt 5), 1681-1690 (1997) PUBMED 9168617 REFERENCE 2 (bases 1 to 4239) AUTHORS Ge,Y. TITLE Direct Submission JOURNAL Submitted (03-JUL-1996) Yigong Ge, West Virginia University, Microbiology, HSCN, Morgantown, WV 26506, USA FEATURES Location/Qualifiers source 1..4239 /organism="Borreliella burgdorferi" /mol_type="genomic DNA" /strain="212" /db_xref="taxon:139" /clone="pW3 and pW4" gene complement(1..422) /gene="thdF" CDS complement(<1..422) /gene="thdF" /codon_start=1 /transl_table=11 /product="ThdF protein" /protein_id="AAB62738.1" /translation="MSKFFERDDDIVALATPFLSSALCVIRSSGASSISKFSKIFSNH SALNSASGNTIHYGYILDSENGCKVDEVVVCLYAPKSFTGQDAIEVMAHGSVIGIKKI IDLFLKSGFRMAEPGEFTLRAFLAKKIDLTKAEAIHEI" gene 560..1000 /gene="flbF" CDS 560..1000 /gene="flbF" /function="putative motility protein" /codon_start=1 /transl_table=11 /product="FlbF protein" /protein_id="AAB62739.1" /translation="MVEEIYNSYLKIKEYIDNKNEIGLKEVANKTKILLESFKEIESK RDEIWKKFTKNENFKSTYEAVEKLTTIYKQEIYDYLHKLKIGILNIKNLNYIIQNYVN TSLDMLSIIFQDIQESVENVTYKNPYGPKIGRSNEASVLINKKL" gene 1012..2862 /gene="flgK" CDS 1012..2862 /gene="flgK" /function="flagellar hook associated protein" /note="HAP1" /codon_start=1 /transl_table=11 /product="FlgK protein" /protein_id="AAB62740.1" /translation="MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTM KTEIPLYAPQLNRAKKQGQLGQGIVVQSIDRVKDELLNTRIIEESHRLGYWTSQDKFI SILEDVYNEPEDQSIRKRLNDFWESWHDLANQPQGLAERKIILERGKSFCEGIRNRFH SLERIYIMANDEIKITTDEANNYIRNIANLNKQISKSQAMKDNPNDLMDARDLMVEKL GNIISVSIENKQDPNEFLIHAEGRHLVQGSIANEFKLEATNGPTRTRWNILWANNDKA YLKTGKLGSLLNIRDEEIKNEINELNNIAANIIEIVNEIHEAGRGMDKKNGRSSFSQE LKLTDDRGRYDTNGNGQFDSVHIFKINSTNEIFPEEKLGFYGTLKFEATNSNEIVEIP YNAPDTVQDVINRINNSNAQVTARINSEGKLEIKAVKEQEDENITFKIKHIEDSGSFL TKYTGILNASGPEGAYDYKNIDTTDKLAPKSTYSISPLKNPAAWIKVADIIDSDPSKI ASGIKNPTNEISIGDNQAALRISSFGNSQIMIGKNLTLNDYFRNTRSNIRIKGQISEI TKESQSQILKDLTDLRMSISGVNKDEELANMIEFQQAFIAQVNLSLFLLN" gene 2897..4174 /gene="flgL" CDS 2897..4174 /gene="flgL" /function="flagellar hook associated protein" /note="HAP3" /codon_start=1 /transl_table=11 /product="FlgL protein" /protein_id="AAB62741.1" /translation="MINRVSHPLTYENFKTSSAEQESKITKLLENLHKGGKRIVKLRN DPTGVTHAIRLDNDIFKLNVYIKILTLLKATLDIRKDIYSLLQIFLTRAKEIAIQGAS GTYESDDKKMISKEVNALLEDVVAIANAKGPDGYSIFSGTKIDSEAFKVTRENKISKT SKDGAGPQIIKVEYNGNQAEKKTEVYNDIHMSNNYPGNVIFFLQNQNIISSINTNGFA VKENTKIYIDNIEIGLTAGDTALDIVAKINESSAPVEASIDPVLNSSSIKTTTPHQIW ITEEKESNVLQTLGILTKNNDTKLPPYNLSSSTEVRSRSIFDALIELRDTLYNNKEEL VGSRSLAEIDESLKKITYIRCRSWSKKKNRLDRSYERISKEAADMKEDMIQYTDLDVT KAITNLNMASLAYQVSIGISAKIMQTTLLDFIK" CDS 4176..>4239 /function="unknown (putative motility related protein)" /note="orfX" /codon_start=1 /transl_table=11 /protein_id="AAB62742.1" /translation="MIDEKSIEFDFPEGILGLKIH" BASE COUNT 1813 a 657 c 666 g 1103 t ORIGIN 1 ataatctcat gaattgcctc tgcctttgta agatcaattt ttttagcaag aaatgcacgt 61 aaagtaaatt caccaggttc agccatccta aacccacttt ttaaaaacaa atctataatt 121 tttttaattc caatcacaga accgtgagcc ataacttcaa tagcatcttg ccctgtaaag 181 ctttttggtg catataaaca aacaacaact tcatctacct tacaaccatt ctcactatct 241 aatatataac cgtaatgaat cgtattccca gatgctgaat tgagagctga atgatttgaa 301 aagattttag aaaatttaga tatagaagaa gcaccactgc tacgaatcac acataaagca 361 ctacttaaaa aaggtgttgc aagagctaca atatcatcat ctctctcaaa aaacttactc 421 atactttaat gtattataac acaataaaaa agacaaaatt gatttgtaaa tatgtttata 481 atagcttata attaatttca taaaaatgaa aacaaaactt gaaactgaac taaaagaagt 541 cttaaaaaaa gaacttctct tggtagaaga aatatataat tcatacttaa aaataaaaga 601 atatatcgac aataaaaatg aaataggact taaagaggtc gcaaacaaaa caaaaatatt 661 gcttgaaagt tttaaagaaa ttgaaagcaa aagagatgaa atttggaaaa aatttaccaa 721 aaatgaaaac tttaagtcaa cttacgaagc tgtagaaaaa ttgactacaa tttacaaaca 781 agaaatatac gactatctac acaaattgaa aattggaata ctgaatatca aaaatttaaa 841 ctacataata caaaactatg taaacacgtc ccttgacatg ttatcaataa tatttcaaga 901 tatccaagaa agtgtagaaa atgtaactta taaaaaccct tacgggccaa aaattggacg 961 ctcaaacgaa gcttccgttt taataaataa aaaactttaa aggagtttag agtggattca 1021 acattttcag gaatagaaat tggcaaaaga agtttatttg cacataaaga tgctatgaat 1081 acagttggac acaatttatc caatgctaca aagcctggat attcaaggca aagagtaaca 1141 atgaaaaccg aaattcctct ttatgctcca caattaaaca gagccaaaaa acaaggacaa 1201 ttgggacagg ggattgttgt tcaatctata gacagagtaa aagatgaact acttaacaca 1261 agaatcattg aagaatcgca ccgactagga tactggactt cacaagacaa gtttatatca 1321 atattagaag atgtttataa cgaacctgag gatcaatcaa taagaaaaag attaaatgat 1381 ttttgggaaa gttggcacga tctagcaaat caaccacaag gtttagcaga aagaaaaata 1441 attctagaaa gaggcaaatc tttttgtgaa ggaataagaa atagattcca ttcgcttgaa 1501 agaatttaca taatggcaaa cgatgaaata aaaattacaa cggatgaggc aaacaattac 1561 attagaaaca ttgcaaatct taataaacaa atttcaaaat ctcaagcaat gaaagacaat 1621 ccaaatgact taatggatgc aagagactta atggttgaaa aattgggcaa tataataagt 1681 gtatcaattg aaaacaaaca agatcccaat gaatttttaa tccacgcaga aggaagacat 1741 cttgtacaag gttcaattgc aaatgaattc aaactagaag ctacaaacgg gcccaccaga 1801 actagatgga acattttatg ggcaaataat gacaaagctt accttaaaac gggaaagctg 1861 ggatctttgc ttaacataag agatgaagag attaaaaacg aaatcaatga actaaataat 1921 atagctgcca acattataga aattgttaat gaaatacatg aagcaggacg tggaatggat 1981 aaaaaaaatg gaagaagttc tttttctcaa gaactaaaac taactgatga tcgaggtaga 2041 tatgatacta atggaaatgg tcagtttgat tccgttcata ttttcaaaat taacagcaca 2101 aatgaaatat ttccagaaga aaaattggga ttttacggaa ctcttaaatt tgaagctaca 2161 aatagtaatg aaattgtaga aataccctac aatgctccag atacagttca agatgtaata 2221 aatagaataa ataattccaa cgcacaagtt acagcaagaa ttaactcaga aggcaagctt 2281 gaaatcaaag cagttaaaga acaagaagat gagaatataa catttaaaat caaacatata 2341 gaagattctg gatcatttct aacaaaatat acaggaatat taaatgcatc tggacctgag 2401 ggagcttatg attataaaaa tattgacaca acagacaaat tggcgcctaa atcgacttat 2461 tcaatctctc ctctaaaaaa tcctgcagca tggataaaag ttgcagacat aatagactca 2521 gatccttcaa aaatagcatc gggaattaaa aatccaacaa atgaaatatc tattggagat 2581 aaccaagcag cactaagaat ctcctctttt ggaaattctc agattatgat tggcaaaaat 2641 ttaacattaa atgattactt tcgaaataca cgatcaaata tacgaataaa aggacaaatt 2701 tcagaaatca caaaagaaag ccaatctcaa atattaaaag atttaacaga tctaagaatg 2761 tctatttctg gagtaaacaa agatgaagaa cttgcaaaca tgatcgaatt tcaacaagca 2821 tttattgcgc aagtaaattt atcactgttt ctgttgaact aatagacaca gtaataaata 2881 aaatgggagt ataagcatga taaatagagt aagtcatcca ttaacatatg aaaatttcaa 2941 aacctcttca gcagagcaag agtctaaaat tacaaaactt ttagaaaact tacacaaagg 3001 cggcaaaagg attgtaaaat taagaaacga tccaacaggc gttactcacg caataagact 3061 agataacgac atatttaagc ttaatgtata cataaaaata ttgacacttc taaaagcaac 3121 cttagatata cggaaggata tttacagtct cttacaaata tttttaacac gagctaaaga 3181 aattgcaatt caaggagcaa gcggaactta tgaatcagat gacaaaaaaa tgatatcaaa 3241 agaagtaaat gccttgcttg aagatgtagt tgcaatagca aacgccaaag ggcctgatgg 3301 atacagcata ttctcgggga ctaaaattga tagcgaggcg tttaaggtaa ctagagagaa 3361 taaaataagc aaaacaagca aagacggtgc gggcccccaa ataatcaaag tagaatacaa 3421 cggcaaccaa gctgaaaaaa aaacagaggt atacaatgac attcatatgt caaataatta 3481 ccctggaaat gtaatatttt tcttacaaaa tcaaaatatt atctcatcaa taaacactaa 3541 tggatttgcc gtaaaagaaa atacaaaaat ttatattgac aatattgaga taggactaac 3601 agcaggagat actgctcttg acatcgttgc aaaaatcaat gaatcttcag cgcctgttga 3661 agcaagcatt gatcccgttt taaactcatc gtctattaaa actacaactc cacaccaaat 3721 ttggataaca gaagaaaagg aatcaaatgt tttacaaaca cttggaatac ttaccaaaaa 3781 caatgatacc aaactacctc cttacaacct ttctagtagc acagaagtta gaagtaggtc 3841 cattttcgat gcgcttattg agcttagaga cacactttac aataacaaag aagagcttgt 3901 tggaagtaga agtctggcag aaattgacga aagcttaaaa aagattactt atatccgttg 3961 cagatcttgg agcaaaaaga aaaatagact tgatagaagc tatgaaagaa taagcaaaga 4021 agctgcagat atgaaagaag atatgattca atatacagat cttgatgtaa caaaagcaat 4081 aactaattta aatatggcaa gcttagctta tcaagtgtct ataggaatct ctgctaaaat 4141 aatgcaaacg actttattag attttataaa atagaatgat agatgaaaaa agtatagaat 4201 ttgattttcc cgagggaata cttggattaa aaattcatt //