LOCUS MMU49251 3814 bp mRNA linear ROD 11-MAR-1996 DEFINITION Mus musculus putative cerebral cortex transcriptional regulator T-Brain-1 (Tbr-1) mRNA, complete cds. ACCESSION U49251 S78858 VERSION U49251.1 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 3814) AUTHORS Bulfone,A., Smiga,S.M., Shimamura,K., Peterson,A., Puelles,L. and Rubenstein,J.L. TITLE T-brain-1: a homolog of Brachyury whose expression defines molecularly distinct domains within the cerebral cortex JOURNAL Neuron 15 (1), 63-78 (1995) PUBMED 7619531 REFERENCE 2 (bases 1 to 3814) AUTHORS Smiga,S.M. TITLE Direct Submission JOURNAL Submitted (15-FEB-1996) Susan M. Smiga, Psychiatry, UCSF, 401 Parnassus Avenue, SF, CA 94143, USA COMMENT On Mar 12, 1996 this sequence version replaced gi:1042023. FEATURES Location/Qualifiers source 1..3814 /organism="Mus musculus" /mol_type="mRNA" /strain="BALB/c" /db_xref="taxon:10090" /chromosome="2" /map="2q23-q37" /note="First 8 base pair were sequenced from genomic" gene 1..3814 /gene="Tbr-1" CDS 96..2141 /gene="Tbr-1" /note="putative transcriptional regulator; T-box brain gene; Tes-56" /codon_start=1 /product="T-Brain-1" /protein_id="AAA92011.1" /translation="MQLEHCLSPSIMLSKKFLNVSSSYPHSGGSELVLHDHPIISTTD NLERSSPLEKITRGMTNQSDTDNFPDSKDSPGDVQRSKLSPVLDGVSELRHSFDGSAA DRYLLSQSSQPQSAATAPSAMFPYPSQHGPAHPAFSIGSPSRYMAHHPVITNGAYNSL LSNSSPQGYPTAGYPYPQQYGHSYQGAPFYQFSSTQPGLVPGKAQVYLCNRPLWLKFH RHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILADPNHWRFQGGKWVPCGK ADTNVQGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGASNNNGQMVVLQSLHKYQ PRLHVVEVNEDGTEDTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFR DNYDTIYTGCDMDRLTPSPNDSPRSQIVPGARYAMAGSFLQDQFVSNYAKARFHPGAG AGPGPGTDRSVPHTNGLLSPQQAEDPGAPSPQRWFVTPANNRLDFAASAYDTATDFAG NAATLLSYAAAGVKALPLQAAGCTGRPLGYYADPSGWGARSPPQYCGAKSGSVLPCWP NSAAAAARMAGANPYLGEEAEGLAAERSPLAPAAEDAKPKDLSDSSWIETPSSIKSID SSDSGIYEQAKRRRISPADTPVSESSSPLKSEVLAQRDCEKNCAKDIGGYYGFYSHS" BASE COUNT 841 a 1100 c 894 g 979 t ORIGIN 1 tttctgtcta gtggaggggt ctgtggattc ctagtgtatg ataaacagga ctttaaaacc 61 cagggacggg agggcagtgt tcaggttcta gagctatgca gctggagcat tgcctctctc 121 cttctatcat gctctccaag aaatttctca atgtgagcag cagctaccca cattcgggcg 181 gatctgagct tgtcttgcat gatcatccca ttatctcgac cactgacaac ctggagagaa 241 gttcaccttt ggaaaaaatt accaggggga tgacgaatca gtcagataca gacaattttc 301 ctgactccaa ggactcacca ggggacgtcc agagaagtaa actctctcct gtcttggacg 361 gggtctctga gcttcgtcac agtttcgatg gctctgctgc agatcgttac ctactctctc 421 agtccagcca gccacagtct gcggccaccg ctcccagtgc catgttcccg taccccagcc 481 agcacggacc ggcgcatccc gccttctcca tcggcagccc cagtcgctac atggcccacc 541 acccggtcat taccaacgga gcttacaaca gcctgctgtc caactcttcg ccgcagggct 601 accccacggc cggctacccc tacccacagc agtacggcca ctcctaccaa ggagcccctt 661 tctaccagtt ctcctccacc cagcccgggt tggtgcccgg caaggcgcaa gtatacctgt 721 gcaacaggcc actttggctg aaatttcatc ggcatcaaac ggagatgatc atcactaaac 781 agggaaggcg catgtttccc tttttgagtt ttaacatttc tggtctcgat cccaccgctc 841 attacaatat ttttgtggat gtgattttgg cggatcccaa tcactggagg tttcaaggag 901 gcaaatgggt tccttgtggc aaagcggaca ccaatgtgca aggaaaccgg gtctatatgc 961 atccggattc ccccaacact ggggctcact ggatgcggca agaaatctct tttggaaaat 1021 taaaacttac caacaacaag ggagcatcaa acaacaatgg gcagatggtg gttttacagt 1081 ccctgcacaa gtaccagccc cgtctgcacg tggtggaagt gaatgaggat ggcacagagg 1141 acaccagcca gccaggccga gtccagacgt tcacttttcc ggagactcag ttcatcgctg 1201 tcaccgccta ccagaacacg gatattacac aactaaaaat agatcataac ccctttgcaa 1261 aaggatttcg agataactat gacacgatct acacgggctg cgacatggac cgcttgaccc 1321 cgtcgcccaa cgactctccg cgctcgcaga tcgtgcccgg cgcccgctac gccatggccg 1381 gctctttcct gcaagaccag ttcgtgagca actacgccaa ggcccgcttc cacccgggcg 1441 ccggcgcggg tcccgggccg ggcacggacc gcagcgtgcc gcacaccaac gggctgctgt 1501 ccccgcagca ggccgaggac ccgggcgcgc cgtcgccgca gcgctggttc gtcacgccgg 1561 ccaacaaccg gctggacttc gcggcctcgg cctacgacac ggccacggac ttcgccggca 1621 acgcggccac gctgctgtcg tatgcggccg cgggcgtgaa ggcgctgccc ttgcaggccg 1681 cgggctgcac gggccgcccg ctcggctact acgccgaccc ttcgggctgg ggcgcgcgca 1741 gccccccgca gtactgcggc gccaagtcgg gctccgtgct cccctgctgg cccaacagcg 1801 ccgcggccgc cgcgcgcatg gccggcgcca acccctatct gggcgaggag gccgagggcc 1861 tggcggccga gcgctcgccg ctggcgcccg ccgccgagga cgccaagccc aaggacctgt 1921 ccgactccag ctggatcgag acgccctcct ccatcaaatc catcgactcc agcgactcgg 1981 ggatttacga gcaggccaag cggaggcgga tctcgccggc tgacacgccg gtgtctgaga 2041 gctcgtcccc gctcaagagc gaggtgctgg cccagcggga ctgcgagaag aactgcgcca 2101 aggacatagg cggctactat ggcttctact cgcacagcta ggccgccagc ccgctcgccc 2161 gcccgcccgt gcccccggcc ccccagctcg gccccacgtc ctccttccca ggcccgttct 2221 agcgcactcg ctctttcact tgaccctcga tgaccgtctg cggggataag tgcaggtctc 2281 tcactatgat tttaaaactc ttcttttttc tttctttctt tctctctaca cagccttctc 2341 tgcagttagc gcaccgacct tgaacctggc tgtaaacctt gtggttttcc aacttttcgt 2401 ctgtgaggtt atgatcctcc ctgtcttttt tccaccccct tctccttgcc ccactcatcc 2461 tctcctttct cttggaatga aactcttcaa ctttaggaga cctgggcaat cctgccaggc 2521 agcagcgatt ccgacccgcc ttgtcttggc ctccctattt aaccatagga tgttgactct 2581 agaacctgca cccacccagc gcgtcctttc ttatacccga gtggatggat ggatggatgg 2641 atggatggta gggatgttaa tacttttagt ggaacaaagc ctgtgaaatg attgtatata 2701 gtgttaattt attgtaacga atggctagtt tttattctca ttgtcaaggc acaaaaccag 2761 ttcacgctta actttttatt cctttccttt cttctccttt tctttttctc ctctcattct 2821 ttctcttctc ccacaccctt tgttttcttg tgagttatta aagatattct aagaggctct 2881 ggaaacacga agcacttcat agtggtggct ttctcacttc tcagttcgtt gcatgatgta 2941 accactgtgt gccctggtgc acacaatgta gctaaggaga atccacctga acacctgtaa 3001 aagctagttg tctgttccta ggcgagtcga gtaagtgaca cgatgcctgc caggcggact 3061 taactggagt tctatgtgtt tctcccttcc ttctaaatgg aatggcccca catcagcaat 3121 attattttgc cttatttgtt tttccccaaa gtgccaaatc cattactggt ctgtgcaggt 3181 gccaaatatg ctgataaact gtttctgact atcttttcag accccactcc acctttatat 3241 gctgtaaatc tttgtaatga gtaatctact aatgatatag atgactgaat tgttggtaac 3301 tatagtgtag tctagtgaag atgaattgtg tgagttgtat attttactgc attttagttt 3361 gaaaaacgat tcccccacca cttagagaca gctgaaattt gactttcttg ggaaaacact 3421 agcattattg caagtaagac tgattccccc caagtcttgt tatatttgat aaggagcatt 3481 aatccccctg gaaatagatt agtaggattt ctaatgttgt gtagcaaact tatacttttt 3541 ttgtacttta aaatcaatgt gaaatatgca tcatacacaa tattcaatct agattccagt 3601 ctatgggggg atttgtccta ataggaattc agggtctaaa cgtgggtata ctttggctct 3661 cctgtaaatc aaatgttgtg attttttata tttgttttgt tttgtctgtg aattgaataa 3721 tttatacaag tacacactcc actgagaatc gttttgtttt ctgctcgttt gtatcgtctg 3781 tgtataacaa gtaaaataaa tctggtaaaa tgct //