LOCUS RNU49055 4794 bp mRNA linear ROD 20-JUL-1996 DEFINITION Rattus norvegicus CTD-binding SR-like protein rA8 mRNA, complete cds. ACCESSION U49055 VERSION U49055.1 KEYWORDS . SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 4794) AUTHORS Yuryev,A., Patturajan,M., Litingtung,Y., Joshi,R.V., Gentile,C., Gebara,M. and Corden,J.L. TITLE The C-terminal domain of the largest subunit of RNA polymerase II interacts with a novel set of serine/arginine-rich proteins JOURNAL Proc. Natl. Acad. Sci. U.S.A. 93 (14), 6975-6980 (1996) PUBMED 8692929 REFERENCE 2 (bases 1 to 4794) AUTHORS Corden,J.L. TITLE Direct Submission JOURNAL Submitted (09-FEB-1996) Jeffry L. Corden, Molecular Biology and Genetics, Johns Hopkins Medical School, 725 N. Wolfe St., Baltimore, MD 21205, USA FEATURES Location/Qualifiers source 1..4794 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /tissue_type="hippocampus" CDS 323..4129 /note="CTD-binding SR-like protein" /codon_start=1 /product="rA8" /protein_id="AAC52656.1" /translation="MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVV QSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQVGQEKDVCAPRFSNNIISTFQNLYRC PGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTVAMSNTPGT PVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQ PSILQALDAGLVVQLQALTAQLTAAAAAANTLTPLDQGVSFNKKLMDRFDFGEDSEHS EESKKEIPTPQLSHVSESVNNSIFHQIAEQLQQQNLEQLRQQLLEQQQPQKVTPQDSQ EGAFGSEHSASPSQGSSQQHFLEPEANLDDSIDIQQQDMDIDEGQDVVEEEIFEPEAK KVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSER RAREREKERQKKGLPPVRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINM IPPRGCAYVCMVHRQDSFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDL GVTYIPWEKVKVDDLDGFAEGGMIDQETVNAEWETVKTSEPVKETVQTTQSPAAVEKE TVVTTQSEVFPPPVTMLQIPVAPTVPAVSLVPPAFPVSMPVPPPGFSPIPPPPFLRAS FNPSQPPPGFMPPPVPPPVVPPPAIPPVVPTSLVQPPLSMTPETVKDVGFGSLVLPGG SVAGNLAPSTLPAGNVFNPPSKAEPEEKVPHLTEHQIPSGENTRPVIPSDIPSSAPML AQPPGASNTSGILCVQRPNVSSNSEILGVRPANVSNSAAIMGAQPPNMLNNSGILGIQ PPNVSSGSGLLGVLPPNLPNNSGLVGLQPPNVTNPAGLLGTQPPIGPQNLPPLTIPAQ RMPALPMLDIRPGLIAQAPGPRFPLLQPGIPPQRGIPPPSVLDAALHPPPRGPFPPGD LFSQPERPFLAPGRPNIDSVPNPDKRIPLGNDNIQQEGDRDYRFPPIETREGINRPPP VDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDMRETLVRPGLDHLGRRDHFGFPPE KPWGPRDFDEREHRVLPVFGGPKGLHEERGRFRAGNYRFDPRSGPWNRGFGQEVHRDF DDRRRPWERQRDRDDRDFDFCREINGNRLGRDRIQNTWVPPPHARVFDYFEGATSQRK GENVPQVNGGNTERHAPPPPLPVQKDPELYEKLASSGDADKEESGTAAGVESEAVVES TETEGT" BASE COUNT 1342 a 1160 c 1151 g 1141 t ORIGIN 1 cccgtgggag gaagaggaag gaggagaagg gggtggagag tggagggggc cgaagcttga 61 gtgtggagtc cgcttccgag cggggcggag aaacagagaa ggcgccgcgc cagcccctcc 121 cccaccaccg acccgccccg acggcctcgg tcctgctcgc tgcgcccgcc ccgcgaccat 181 gccgggacct cacgggcgct gaggagcgtc tccagctagc cgtgctccgc ggccttctgg 241 gcccgtcgcc cgcccttccg cacgcaacgc gcccagccgc cgcctcttcc ttcgccgggc 301 cccgggcctc tgcgcagaca acatggaggc cgtgaagacc ttcaacagcg agttgtattc 361 gctgaatgac tataagccac ccatttctaa agcaaaaatg acccagatta caaaggcagc 421 catcaaagct attaagttct ataaacatgt ggtacagagc gttgagaaat tcattcagaa 481 atgtaaacca gaatacaagg tacccggact gtatgttatt gactccattg tgcgacaatc 541 ccggcatcag gttggtcaag aaaaggatgt gtgtgcaccc agatttagta ataacatcat 601 tagcactttc cagaatttat atcggtgccc gggggatgac aagagtaaaa tagtgagagt 661 attaaactta tggcagaaga ataatgtttt taagagcgag attatccagc ctctcctgga 721 tatggcggca gggattcctc ccccagttgt caccccggtt ttggccagca ccactgtagc 781 catgagcaac actccaggaa cacctgtgac acctgttact ccagccaatg tggttcaagg 841 cctacctgat ccatgggtat cgcagataac aaacacagac acactggcag ctgttgccca 901 gatcctacaa agtcctcaag gtcaacagct tcagcaacta atacagacct tacagataca 961 acagcagaag ccccagccct ctatccttca ggctttggat gctggccttg tggttcagtt 1021 gcaggcactc actgcacagc ttacagctgc agctgctgca gccaacacac ttactccctt 1081 ggaccaggga gtctctttca acaagaagtt gatggataga tttgattttg gggaagattc 1141 tgagcatagt gaagaatcca aaaaggaaat tcctactcct caactctctc acgtttctga 1201 gtctgtgaac aactccatct tccatcagat agcagaacag ctgcagcagc agaacctgga 1261 gcagttgcgg cagcagctcc tggagcagca gcagcctcag aaggtaactc ctcaggacag 1321 ccaggaggga gcatttggct ctgagcactc agcttcaccc tcacaaggga gtagccaaca 1381 gcattttctg gaacctgaag caaatttaga tgattccata gacattcagc aacaggatat 1441 ggatattgat gaagggcaag atgttgttga agaggagatc tttgaaccag aagctaagaa 1501 agtagctgtt cgctcaagat caagaactca ttcacgatct cgatcaaggt caccaagaaa 1561 acggaggtcc aggtcacgct ctgggtcccg aaagcgaaag cataggaaga ggtctcgctc 1621 ccgctccaga gagagaaaga gaaaatcctc acgttcctat tcaagtgaac gcagagccag 1681 ggaaagggag aaagaacgcc aaaaaaaggg cttgcctcct gtcagatcga aaacgctaag 1741 tgtatgcagc actactctct gggttggcca agtggacaag aaggctacac agcaagattt 1801 aaccaacctt tttgaggagt ttgggcaaat cgaatccatt aatatgattc cacccagggg 1861 ctgtgcatat gtctgtatgg ttcatcgaca agattcattt cgggctctcc agaaactgag 1921 ttcaggatcc tataaaattg gttccaaggt cattaagatt gcctgggctt tgaacaaagg 1981 tgtaaagaca gaatacaaac agttctggga cgtggatctt ggagtcacat atataccctg 2041 ggaaaaagtt aaagtagatg acttggatgg ctttgcagag ggaggcatga ttgatcagga 2101 aactgtaaat gctgaatggg aaactgtgaa aacctcagaa cccgttaaag agactgtcca 2161 gacgacacag agtccagctg cagttgagaa ggagacagtg gtcacaacgc agtcagaggt 2221 tttccctcct cctgtcacca tgctgcagat tcctgtagca ccaaccgttc ctgcagttag 2281 cttagttcca ccagcgtttc ctgtgtcgat gcctgtcccc cctcctggat tcagccccat 2341 ccctccacct ccttttctac gagcaagttt taacccttca caaccacctc ctggttttat 2401 gccacctcca gttcccccac ctgtggtacc tccccctgca atcccacccg tagtaccaac 2461 atctttagtg caaccaccat tgtctatgac cccagaaact gtgaaagatg ttggatttgg 2521 cagccttgtt ttaccaggtg gttctgttgc tggcaatctt gctccttcaa ctctaccagc 2581 tggaaatgtt tttaatcctc ccagtaaagc agagcctgaa gaaaaagtac ctcaccttac 2641 agaacaccag attccttctg gtgagaatac cagaccagtg attccaagtg atattccaag 2701 cagtgctcca atgttagcac agccgcctgg ggcctcaaac acctctggga tcctgtgcgt 2761 gcagagacca aacgtatcaa gcaattctga aattctgggg gttcgtccag ccaatgtttc 2821 caacagtgct gcgattatgg gagcccagcc accaaatatg ctcaataact ctggaatttt 2881 gggcatacag ccaccaaatg tgtccagtgg ctctggactt cttggggtac tgcctccaaa 2941 cttgcctaac aactctggac ttgtaggact acagccacca aatgttacaa atcctgctgg 3001 acttttggga acacagccac caattggacc tcaaaactta ccccctttaa ccatccctgc 3061 tcaaaggatg cctgcgttgc caatgttaga cattcgtccg ggactgatag cacaggctcc 3121 tgggccaaga ttccctttac tacagcctgg aattccacca caacggggta tccctccccc 3181 atcggtactt gacgcagctc ttcatccacc accccgtgga ccttttcctc caggggatct 3241 ttttagtcag ccagaaagac cttttctggc tcctggaaga ccaaatatag acagtgttcc 3301 taacccagat aaaagaatac cacttgggaa tgacaatatc cagcaggaag gggatagaga 3361 ttaccgcttt cctcctatag aaaccaggga gggcattaat agacctcctc cagtggatgt 3421 tagggatgtg gttggacgac ctatagatcc cagagaaggc cctggtaggc ctccgttaga 3481 tggtagggat cattttggaa gacctccagt ggacatgaga gagactcttg tgaggccagg 3541 tctagaccac cttggccgaa gagaccactt tggctttccc ccagaaaagc cttgggggcc 3601 tagagatttc gatgagagag agcaccgagt tctgcctgtc tttggtggtc caaagggctt 3661 acatgaagaa agaggcagat ttcgggctgg aaattatcga tttgatccta gaagtggtcc 3721 ttggaacaga ggatttggac aagaagttca cagagatttt gatgaccgca gaagaccctg 3781 ggagaggcag agggataggg atgacagaga ttttgatttc tgcagagaaa ttaatgggaa 3841 tcgtcttgga cgagatagaa ttcaaaacac ttgggttccc cctcctcatg ctcgggtttt 3901 tgattatttc gaaggggcca cttctcaacg gaaaggtgag aatgtgcctc aagttaatgg 3961 tggaaataca gagagacatg ctccgccacc gcctttgcca gtgcagaagg accctgaact 4021 ctatgagaag ctggcgtctt caggagacgc agacaaggag gagagcggca cagctgctgg 4081 tgtagagagt gaagcggtgg tagaaagcac agagactgag gggacataac atcgctcagt 4141 aggtaaaaga aaccttttgt acagttgtca tctctgtaag aggttaatgg ctgactgcac 4201 cacagttgtt cacgtttatc taccagaact aagttaatct gatgtacgtg ttcacctttc 4261 tcttaaaata attgtacaac tgacttgtat agacattgtt cttaatatga acatggtagg 4321 taaacatttt tttatttttc tgataaagta taaatgttgc cccagattct tttaacgtca 4381 aggagatgct aacagcttgt cgagacttcc tatggaagag aaggttttag acacagtcat 4441 tgggatgggt atggcaatga catatttcag aacagcaagg tgtggcacat ctccatatct 4501 ctaggctgct gcagggtttt aaggtgacag acaaagctgt gatattttat gcaaggactg 4561 gctctagatt cttgaggagc ataatacaga gattttaaaa agtgattttg taaaaatctc 4621 cactatggtc tctgttactc caaagtaagt gtgtgtgatt tgttcctcat actgcagtaa 4681 gtaaaaaaga aaagaagcaa acaacataaa cattcaaata cgttttaatg ttgggtgaat 4741 tttgttttta gatgccaata aaacttattt gtttgaaaaa aaaaaaaaaa aaaa //