LOCUS HSU43901 8171 bp DNA linear HUM 15-MAR-2002 DEFINITION Homo sapiens 37 kD laminin receptor precursor/p40 ribosome associated protein (LAMR1) gene, complete cds; and E2 small nuclear RNA gene, complete sequence. ACCESSION U43901 VERSION U43901.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1819 to 2840) AUTHORS Nag,M.K., Thai,T.T., Ruff,E.A., Selvamurugan,N., Kunnimalaiyaan,M. and Eliceiri,G.L. TITLE Genes for E1, E2, and E3 small nucleolar RNAs JOURNAL Proc. Natl. Acad. Sci. U.S.A. 90 (19), 9001-9005 (1993) PUBMED 8415643 REFERENCE 2 (bases 1 to 8171) AUTHORS Jackers,P., Minoletti,F., Belotti,D., Clausse,N., Sozzi,G., Sobel,M.E. and Castronovo,V. TITLE Isolation from a multigene family of the active human gene of the metastasis-associated multifunctional protein 37LRP/p40 at chromosome 3p21.3 JOURNAL Oncogene 13 (3), 495-503 (1996) PUBMED 8760291 REFERENCE 3 (bases 1 to 8171) AUTHORS Bhattacharyya,N., Han,J., Le,P., de la Pena,M., Wrathall,L.S. and Sobel,M.E. TITLE Transcriptional regulation of the LAMR1 gene in human breast cancer-derived cell lines JOURNAL Unpublished REFERENCE 4 (bases 1 to 8171) AUTHORS Jackers,P. TITLE Direct Submission JOURNAL Submitted (22-DEC-1995) Pascale Jackers, Department of Pathology, University of Liege, Tour de Pathologie, B23, 3eme Etage, Liege 4000, Belgium REFERENCE 5 (bases 1 to 8171) AUTHORS Sobel,M.E., Wrathall,L.S., Le,P. and Castronovo,V. TITLE Direct Submission JOURNAL Submitted (27-FEB-2001) Pathology, NIH/NCI, 10 Center Drive, Bethesda, MD 20892-1500, USA REMARK Sequence update by submitter COMMENT On Mar 15, 2002 this sequence version replaced U43901.1. FEATURES Location/Qualifiers source 1..8171 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" /chromosome="3" /map="3p21.3" gene 1..8090 /gene="LAMR1" regulatory 1..2344 /regulatory_class="promoter" /gene="LAMR1" mRNA join(2345..2396,3248..3413,4228..4346,6409..6654, 7304..7432,7551..7716,7930..8090) /gene="LAMR1" /product="37 kD laminin receptor precursor/p40 ribosome associated protein" prim_transcript 2345..8090 /gene="LAMR1" /note="37 kD laminin receptor precursor/p40 ribosome associated protein" mRNA join(2347..2396,3248..3413,4228..4346,6409..6654, 7304..7432,7551..7716,7930..8090) /gene="LAMR1" /product="37 kD laminin receptor precursor/p40 ribosome associated protein" prim_transcript 2347..8090 /gene="LAMR1" /note="37 kD laminin receptor precursor/p40 ribosome associated protein" exon 3248..3413 /gene="LAMR1" /number=2 CDS join(3281..3413,4228..4346,6409..6654,7304..7432, 7551..7716,7930..8024) /gene="LAMR1" /note="37LRP/p40; metastasis-associated multifunctional protein" /codon_start=1 /product="37 kD laminin receptor precursor/p40 ribosome associated protein" /protein_id="AAC50652.1" /translation="MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSD GIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGR FTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIA IPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAA EKAVTKEEFQGEWTAPAPEFTATQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDW SAAPTAQATEWVGATTDWS" exon 4228..4346 /gene="LAMR1" /number=3 repeat_region 4443..4741 /gene="LAMR1" /rpt_family="Alu" repeat_region 4826..5139 /gene="LAMR1" /rpt_family="Alu" exon 6409..6654 /gene="LAMR1" /number=4 ncRNA 6709..6860 /ncRNA_class="snRNA" /product="E2 small nucleolar RNA" exon 7304..7432 /gene="LAMR1" /number=5 exon 7551..7716 /gene="LAMR1" /number=6 exon 7930..8090 /gene="LAMR1" /number=7 BASE COUNT 2072 a 1794 c 2013 g 2289 t ORIGIN 1 aagcttcagc catatggccc ttctttgagt cttatatttc atgtggctcc tgtgcataag 61 cacattaatg tgtatgtttg gcctggtgtg gtgctcacgc ctgtaatccc agcactttgg 121 gaggccgagg tgggcagata acctgaggtc aggagttcaa gtccagcctg accaacatgg 181 agcaacccca tttctactaa aaatacaaaa ttagccgggt gtggtggcgc atgcctataa 241 tcccagctac tcgagaggct gaggcaggag aattgcttga acccgagagg cggaggtttc 301 gttgagccga gattgagcca ctgcactcca gcctgggcaa caagagcaaa actccgtctc 361 aaaaaaaaaa agtgtatgtt tcttctcctg ttaatttgtc tattgtcagt tcattttagc 421 agtgaacgct cagagggtgg aggggaagcc cctacaagag ctttaaaagc tactgatgct 481 tgggtctcac tcagagattc tgatatattc agcccaggtg taagatttta aaagctgccc 541 aggtgatcct aatgccaagg ctgaggcccc tggaggaacc ctgcagagct gcactcacta 601 ctcagcaatt ccaatccaca cgtgaagggt taagcaggag tacatttggg tgcagggggc 661 agggcattgt tttgggactc aggggcctct gaggaggctt gtggcctgag tttctgccaa 721 caaactgaat gcctcctctt cccataacaa agcgtagaag cgggaggcat ttgccgcaag 781 gggctgtgac ttctctgaat ttgtccctca agccccaggt gcttcagcct tggtgggtga 841 tgaagcagag cagcctgggg gtgacctgtg ctagggtcca agggtttcca agctcctcag 901 aaaatcatac tggcttcagt ggagctgcag agccacttgc aggagaacct ggatgtgctg 961 tcctttggaa gagtggccat aagggtctac gagttcattt tagggtgggc tcagaaatca 1021 gattgactca gcaggcccca gagaggaacc tgcacttttt ttttttttga cggagtctta 1081 ctctgtcgcc caggctggag tgcaagtggc gcaatctcca ctcaccacaa cctctgcctc 1141 ctgggttcaa gcaattctcc cgcctcagcc tccccagtag ctgggattac aggcatgccc 1201 ggctaatttt tgaattttta gtagataccg ggtttcgcca tgttggccag gctggtctct 1261 tgaactcctg gcctcaaggg atccgcccgc gtcagcctcc gaaagtgctg ggattacagc 1321 caccgcgccc cttcaattaa ctcctatttt tttgtttgtt ttttggagac agaatttcgc 1381 tctattgccc aggctggagt gcagcggtgc aatcacattc actgcagcct tgacctctag 1441 gctcaagcta tcctcctgcc tcagcctcct gagtagctga gactacaggg acgcaccatc 1501 atgattggtt aatttttgta ttttttgtgg agatgggggt ctccccatgt ttcccaggct 1561 agtcttgaac ttctgagctc aggcaatcca cccacctcgg cctcccaaag tgctgggatt 1621 acaggcacaa gccaccgggc ccggcaaact tatctcctac tgatggatac tgcaaaattt 1681 ttcttctacc aaaaaaaaaa aaaaaaaaaa agatagatat aatccacatc atctgttcaa 1741 tcttgtcctt tttaactttt tcagggattc agggaaactt cccccaggtg atagatggat 1801 agatacatga gatagatata acgcatacga tcagttcaat cttgtctttt ttaacttttt 1861 cagagaaaac ttcccttaag tgaacattta aatctgaatt acgtcctgtt aaactgttct 1921 ccaggaaaat aaaataaaat aaatcttcaa gtttttgttt acctaacaat ttgttgtgtc 1981 gaacaaacct tcctactttt caggtaacaa aatggcagct taggctagaa agcgctcata 2041 ttcgcaggta caagggctgg gtaagaacgc cccgcctggc tgactaactt gagttccgcg 2101 ctctggacag gaattatgca cagggcgtcg ctgtggcact agaaacccca aagtcacaag 2161 cgccccagat ccgaccagga tgccgctacc cgtgacagcc cagaagcccg ctcctgcgcg 2221 caagcccgcc ttcctgaaga aaaagcccag tcccggcagc gttcttctcc ggctccgccc 2281 ttcttccgct cgactttctt tgccattggc tgacaacgga gtacataagg acgtcatttc 2341 ctgctgcctg tcttttccgt gctacctgca gaggggtcca tacggcgttg ttctgggtga 2401 gttccgtgta gcgtccctgg cgccttccag ggctagaaaa atgagctttt cctgctcaaa 2461 tgaagggtga gaagactagt gatgaaagcc ggtcagactg gatctgtctc ccgcccggcg 2521 cgccccacct taggcctgcc gggcacgtgg caggctcggg cggcgggttc ccagagtgcc 2581 ccgggagcgg gtggaggccg ccctccagcg gaggctccga gctggggttc ggaccaggcc 2641 gcgggtgggc gggagtgcag aaagcgggct aacatcctgt gttgctatct tcggagtccc 2701 acacggcggt gagtcgaggc ccaggcgctg atttacacca gctacttggg ctggtcgggt 2761 tttcccttcg cgccgtgcgg gtcaggagtt aaggttctcg ggtttttaga caaacaagtg 2821 gtgacagcac agcgaagtaa ttccaaagca tccgcctacc aatctgcttg aaaatgtctg 2881 aaaacaattc atgccttttt tgcctttagt ttgcatattc caaacatggc tgctctttta 2941 tatctagttg ttaacttggc gcatccacaa cttttcctta attcctatct tgagaagtgt 3001 tgaatttcca ttcgctaatt tcgtgtagtt ttattactcg gttactctgc cgtccacact 3061 atttcctcag taagatgtgc gctgttccgt aatacacgac atgtatgggt taactttctg 3121 tttacccttc actacactgt aagctcaatg cctgacacta tagcagatgg agtttttggt 3181 tgcttttaag ggtgtgccct acttaactca atggaatgaa aagaaatagg ttgctctctt 3241 atttcagatt cccgtcgtaa cttaaaggga aactttcaca atgtccggag cccttgatgt 3301 cctgcaaatg aaggaggagg atgtccttaa gttccttgca gcaggaaccc acttaggtgg 3361 caccaatctt gacttccaga tggaacagta catctataaa aggaaaagtg atggttagtc 3421 attgctttaa ttttttgtta ctccagctgt aagtacaaat tttgagcttg ctattctcgt 3481 ggttagttct gggtaatttc tttctatctt ccttaaatga agccagaccc ctacgttgaa 3541 aacatacttt aaataaatgt tcttgttatt gagagagaag atttctgctc caggggagaa 3601 tatgtcagtt gtctgagtta cgggacttgg gttgggtcat gaacatgaga aagttcattg 3661 gctgagtttc taatagctcg catagtgcct tcaacttcat aggtacttac acaggctatt 3721 gaactgaatt ttgagtggaa agtggggtaa gaggtgggaa tgaacaatat ggtttggaag 3781 aaccagagga tggaaggcat taagttggct aaggcactta cttattttag agataaagct 3841 accaaggact tgggagtgac atgctgtaaa ggagttttag gatgaatctt gcatcagtgc 3901 agatgataaa agggaaagag tggcagaaag ccagaagtga tcttaagaac caatgatgga 3961 ataagtacag ggaaagagaa aggaaagatg gattagccaa ctgaatctag gctgcacact 4021 attaaagctc agggtggagg ccagtcttgg ctcatgaact tctgagtgtc ggaagtgtgc 4081 tatatcaatg gcaggatttt cgctaacacc agtagagctt gcctctatga ctggagtttg 4141 gtagtactcg ctgccacata gagtaaactt gagaagaatg tttgcacagc caggttaagt 4201 gttacaaatc cttctgccct cacttaggca tctatatcat aaatctcaag aggacctggg 4261 agaagcttct gctggcagct cgtgcaattg ttgccattga aaaccctgct gatgtcagtg 4321 ttatatcctc caggaatact ggccaggttt gtggaacagt ggttagtttt tatattatag 4381 aaataaagcc ttacagacat tgtgagacat atagaaagac ataagaaaac agaaataact 4441 caggcccggg gcgcgtggct nacgcctgta atccccagca ctttgggagg tggagtccag 4501 cgtattacga ggtcaggaga tccacaccat gngtaagccc catctctact aaaaatacaa 4561 aaaattagtt gggcgtgggg gcgggtgcct gtagtcccag cctactcggg gaggccaagg 4621 tggagaatgg cggtgaaccc ggtgggcggg agcttgcagt gagctgagat gccggccact 4681 ggttactcca ggcctggggt ggcaggaggc cagagctctg tctcaaaaaa aaaaaaaaaa 4741 agaaatagta aaactcaaac tccactgtta gagatcttaa gttggactga gccatagaaa 4801 tcgcccttat gacctatgac cttccttttt tttttttttt tttccttcaa agacagtctc 4861 tcgctctgtt gcctgttggc ccatcctgga ctgcagtggt gtgatantcg gctcattgca 4921 gcctttgcct cctaagctca aggattctcc tgcctcatcc tcccgagtag ctggaattcc 4981 aaggatgtgc caccatgcct gactgatttt tgtattttta gtagagacat ggttttacca 5041 tttggccagg ctggtcttaa acgcctgatc tcaagtgatc ctcccacctc ggcctcccaa 5101 aagtgttggg attacaggcg taagccactg cgcccagcct gtaagacctt ttcaacatac 5161 atgctgggca tctgggcaat atgttgaact ttataatttc attttgtgta gacttggtgg 5221 ccactaaata tctagaaatt ctattaaagt ggcttatcac attttcccat ggtcaaagtt 5281 tttaccttaa aacaatgaaa tacctgggac agaaattttt taagaatctt aggccagtca 5341 tgatggcatg caccccatag tttccccgtt aattgggagt ctgagccagg agatccctca 5401 agtccaggag ctgggggctg cagtaagtta tgattttgcc actgcactcc aagcctgggg 5461 cacagagtga gatcctgttt cttaaaaaaa aaaagccagt catgggtggc tcatgctttt 5521 gtaatatggg gtactttgtg aggctgaggg ctggtggctt gcttgagccc agaagttcga 5581 gaccagggtg ggcaacgtgg caaaactccg tctctaccaa aattaacaaa aacgagctgg 5641 gtgtggtgtt ggcgtgcctg tagtctcacg ctgaggctga ggtggggaga ttgctagaac 5701 acaggaggtt gaggcagcag ggagccaaga ctgtccactg gcatcccagc ctgagtgaca 5761 gagtgaggcc ttgtctcaaa gagaacctct gccaacttga atgaaaaata ccttaatttg 5821 tatttttaag aaatgactag ttagtaaaac ttgaatcttt tttgccacag ctctatttta 5881 ataatttttt ctgttgagaa aactagtaga tttcttgaat tctaagagtt ctaacaggga 5941 ttttattcat cttaactatt ttgacagatt taaaaattat gtagtaagac tttatttcaa 6001 tgttgacagg acggttccca tgtgtgtttt tgcagagggt tattcctgaa actgacttgt 6061 tactaggacc acatagtttg gtacacagta gaaaaaaggc agttagttat tgctgtagaa 6121 tgaactgagt gacagttctt gcttgcttga gaaaataata ctgagcatct agattgggcc 6181 aggtagtgtt gctaggtgct cgggatatat agtagaaaaa caagcctgtc ttttttaatg 6241 tatgcaggaa atctctggag aagtaagagg ggttaaggaa agctgggtat gtgcctgctt 6301 tacatggagt agtagtgatt aagttggcca gtgcccagaa gtgcttactg ggtgccagga 6361 ttgttgctgt ggaatatcga gtaccactaa cttttaaatt cttcaaagag ggctgtgctg 6421 aagtttgctg ctgccactgg agccactcca attgctggcc gcttcactcc tggaaccttc 6481 actaaccaga tccaggcagc cttccgggag ccacggcttc ttgtggttac tgaccccagg 6541 gctgaccacc agcctctcac ggaggcatct tatgttaacc tacctaccat tgcgctgtgt 6601 aacacagatt ctcctctgcg ctatgtggac attgccatcc catgcaacaa caaggtaatg 6661 attttaggat ctagagtttg tgaatgcgtg ctctagaaaa aacattcctg tgcacattgt 6721 tagagcttgg agttgaggct actgactggc cgatgaactc gcaagtgtag gtagtgtgct 6781 acatgagggg caagttttcg ctaacaccac aagggtctct ggcccaatga gtggagtttg 6841 atagtaattc ttgctacaag tataacatta ctgcatgaca gctttgtgga gaaatgaaaa 6901 catttggaaa atagtgtgtt cttctgcctt tgtccgtgtt tcttgcctca ggcctcagcg 6961 acttggcctt tgttttcaca ccaacttgat gggttctact ataagatgct aaaaaggtgg 7021 gttgtgtgtg gttcagattg gttgatttgt aaccctagtt gtgcataaga attgcccaga 7081 tatttttttt aaatgccagt gtccaggcat tttttttcaa tccctatgat tccagtgtgc 7141 agacaaggtt gaaaatccct atttataatg ctccctgtta caattgcttt tcaactaaga 7201 gatgtctgta cttttggtac ctagatgatg taagagccag gaaggtgctt gctgtttggg 7261 tttgaccaag tgtcactttt taataatctg ccactcttgg cagggagctc actcagtggg 7321 tttaatgtgg tggatgctgg ctcgggaagt tctgcgcatg cgtggcacca tttcccgtga 7381 acacccatgg gaggtcatgc ctgatctgta cttctacaga gatcctgaag aggtaagctt 7441 ctccaaaggc ttgtggttac ataagcaaat tggacgactt ggactgctgt ctaggaagca 7501 aaacttgtca gtccctgtaa gtctcttcct cttttttttt tgtaacccag attgaaaaag 7561 aagagcaggc tgctgctgag aaggcagtga ccaaggagga atttcagggt gaatggactg 7621 ctcccgctcc tgagttcact gctactcagc ctgaggttgc agactggtct gaaggtgtac 7681 aggtgccctc tgtgcctatt cagcaattcc ctactggtat gtatcaggat agaggtgaat 7741 caagctgata ttttgcaact tctcagtttt attctaactt taatgatctc tgtgactttt 7801 atactagctt taagaggttt tcattccagt gtgctacagc atctgataga ctgctgttgg 7861 gagtggggta aggaaaaata ctacattgag gacagagctg atgggctttt tttggtattc 7921 tcttaacaga agactggagc gctcagcctg ccacggaaga ctggtctgca gctcccactg 7981 ctcaggccac tgaatgggta ggagcaacca ctgactggtc ttaagctgtt cttgcatagg 8041 ctcttaagca gcatggaaaa atggttgatg gaaaataaac atcagtttct aaaagttgtc 8101 cttcatttag tttgcttttt actccagatc tagaatacct gggattgcat atcaaagcaa 8161 gtaataataa a //