LOCUS ATU39263 4501 bp DNA linear BCT 14-JUL-2016 DEFINITION Agrobacterium tumefaciens plasmid pAtR10 proline dehydrogenase (putA) and Prp (prp) genes, complete cds. ACCESSION U39263 VERSION U39263.1 KEYWORDS . SOURCE Agrobacterium tumefaciens (Rhizobium radiobacter) ORGANISM Agrobacterium tumefaciens Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex. REFERENCE 1 (bases 1 to 4501) AUTHORS Cho,K., Fuqua,C., Martin,B.S. and Winans,S.C. TITLE Identification of Agrobacterium tumefaciens genes that direct the complete catabolism of octopine JOURNAL J. Bacteriol. 178 (7), 1872-1880 (1996) PUBMED 8606160 REFERENCE 2 (bases 1 to 4501) AUTHORS Cho,K., Fuqua,C., Martin,B.S. and Winans,S.C. TITLE Direct Submission JOURNAL Submitted (24-OCT-1995) Stephen C. Winans, Microbiology, Cornell University, Wing Hall, Ithaca, NY 14853, USA FEATURES Location/Qualifiers source 1..4501 /organism="Agrobacterium tumefaciens" /mol_type="genomic DNA" /strain="R10" /db_xref="taxon:358" /plasmid="pAtR10" gene complement(60..530) /gene="prp" CDS complement(60..530) /gene="prp" /note="Lrp homolog" /codon_start=1 /transl_table=11 /product="Prp" /protein_id="AAC43979.1" /translation="MANSHKTDDLDHFDLKILEALSEDGRMSVLQLSKRVGLSKTPCQ TRLKRLVDEGYILGFRAVLNPQKLGVDHIAFAEVKLSDTREKALEEFNTAVRKIKEVE ECHMIAGAFDYLLKVRTSDIRKYRRVLGEKISSLPSVSNTSTFVVMQSVKETGI" gene 706..4392 /gene="putA" CDS 706..4392 /gene="putA" /codon_start=1 /transl_table=11 /product="proline dehydrogenase" /protein_id="AAC43980.1" /translation="MADGASKADVNPQQTVNGIFQNFAPPVREQSPLRKAITAAYRRP EEECLAPLIDAATVTPEQAAAIRTTATKLIEALRAKTKGTGVEGLVQEYSLSSHEGVA LMCLAEALLRIPDTATRDALIRDKIARGDWKSHIGGGRSLFVNAATWGLVITGKLTST VNDSGLSAALTKLIARAGEPVIRRGVDMAMRMMGDQFVTGETIGEAIKRSKPLEEQGF QYSYDMLGEAATTAKDAERYYKDYENAIHAIGKASAGRGIYGGPGISIKLSALHPRYA RVQAERVMAELLPRVKSLMLLSKKYDIGLNIDAEEADRLELSLDLLEELALDKDLAGW NGLGFVVQAYGRRCPFVLDYIIDLAQRAGRRIMVRLVKGAYWDAEIKRAQVDGLEDFP VFTRKVHTDVSYIACARKLLAARDVVFPQFATHNAQSMATIYHLAGPDFKLGDYEFQC LHGMGEPLYSEVVGKKKLDRPCRFYAPVGTHETLLAYLVRRLLENGANSSFVNRIADP AVPVASLLEDPVTVVKAYPVPGARHDRIAAPAGLFGPERANSAGLDLSNETALAALDN VLKAGATTEWKAAAPHAGGKTRPVLNPGDHNDVVGYVTEPTEADVEAAMQRAAASNWS STPVEERAACLERAADRMQAEMPALLGLIMREAGKSMPNAIAEVREAIDFLRYYAAEA RKTFKANETPLGPVVCISPWNFPLAIFIGQVTAALVAGNPVLAKPAEETPLIAAQGVR LLHEAGVPQDAVQLLPGDGKTGAALVGSALTAGVMFTGSTEVARLIQGQLAGRVLANG QPVPLIAETGGQNAMIVDSSALAEQVVADVIASAFDSAGQRCSALRILCLQEDVADRT LTMLKGALHELRIGRTDSLSVDVGPVITAEAKGIIEKHVDSMRALGHRIEQISLAGET GKGTFVPPTIIEMKSLADLKKEVFGPVLHVIRFKRDNLDRLIDEINATGYGLTFGLHT RLDDTIQHVLSRVAAGNLYVNRNIIGAVVGVQPFGGRGLSGTGPKAGGPLYLGRVTQT APKIDRVASQQDQAAVDLARWLDENGQSVAAEAARQAAALSGLGFETELAGPVGERNV YALHPRGKVLLIPATEQGLYRQLAAALATGNSVVIDNASGLEKSIYGLPATVTSRITW ADSWEKSAPFAGALIEGDAERVVAINKKIPALPGPLVLVQAATTEALDRETQPYNLDW LVEEVSVSVNTTAAGGNASLMSIG" BASE COUNT 900 a 1438 c 1307 g 856 t ORIGIN 1 gaattcgcaa agcattagac gggtaggctc atgcctgccc gtttttcttc gccgcgtcgt 61 cagataccgg tctccttgac cgactgcatc acgacgaatg tcgaagtgtt ggaaaccgat 121 ggaaggctgg agattttttc gccgagcacc cttcggtatt tgcggatatc gctggtgcgc 181 accttcagta gataatcgaa ggcgccggcg atcatgtggc attcctccac ctccttgatc 241 ttgcgcaccg ccgtgttgaa ttcctcaagc gccttttcgc gtgtgtcgga aagcttgacc 301 tcggcgaagg cgatatggtc gacgcccagt ttctgcggat tgagcaccgc acggaagccc 361 agaatataac cttcatccac caaccgcttg agccgcgtct ggcacggcgt cttggagagg 421 ccgacccttt tcgacagttg cagcaccgac atgcgcccgt cttcgctgag ggcctcgaga 481 atcttgagat cgaagtggtc cagatcgtct gttttatgac tattagccat gtgatttcac 541 gccaattttg aataataaaa gttcatatgg cctgttctat cctcaaaata ggaccatagc 601 aatttttacg gcaatgatat tgtacacagc agaatgacaa gcggcgagcg gaggacacgc 661 tgccgctgac agtctgtctt caacagcttt ttcaggattt tcagaatggc cgatggtgca 721 agcaaagccg atgtaaaccc gcagcagacg gtgaacggta ttttccagaa ttttgcaccg 781 cccgtgcgcg agcagagccc gttgcgcaaa gcaattaccg ccgcttaccg ccgcccagag 841 gaagagtgcc tggcgcctct gatcgatgct gcgaccgtca cgcccgagca ggccgcagcc 901 attcgcacca cggcaaccaa gctgatcgag gcgttgcgcg ccaagacgaa aggcaccggc 961 gtcgaggggc tggtgcagga atattcgctc tccagccatg agggcgtggc cctgatgtgc 1021 cttgccgaag cactgctgcg cattcccgac accgccaccc gcgacgcgct gatccgcgac 1081 aagatcgccc gcggcgactg gaagtcccac atcggcggcg ggcgctcgct gttcgtcaac 1141 gccgcaacct ggggtcttgt catcaccggc aagctgacct cgacggtcaa tgacagcggc 1201 ctttcggcgg cgctgaccaa gctgatcgcc agggctggcg aacccgtcat tcgccgcggc 1261 gtcgatatgg cgatgcgcat gatgggcgac caattcgtga ccggcgaaac gattggggaa 1321 gcgatcaagc gctcgaaacc gctggaggaa cagggtttcc aatattccta cgacatgctc 1381 ggcgaagcgg cgaccaccgc caaggatgcg gagcgttatt acaaggacta cgaaaacgcg 1441 atccacgcca ttggcaaggc ctccgccggg cgtggcatct atggtggccc cggaatttcc 1501 atcaagcttt cggccctgca tccgcgttat gcccgtgtgc aggcagagcg ggtaatggcg 1561 gagcttctgc cgcgtgtgaa atccctgatg ctgctcagca agaaatacga tatcggcctc 1621 aacattgacg ccgaggaagc cgaccggctg gaactgtcgc tcgatcttct ggaggaactg 1681 gcgctcgaca aggatcttgc cggttggaac ggcctaggct tcgttgtgca ggcctatggc 1741 cgccgctgcc cctttgttct cgactacatc atcgatctcg cccaacgtgc cggtcgccgc 1801 atcatggtgc gtcttgtcaa gggcgcctac tgggatgcgg agatcaagcg cgcacaggtg 1861 gacgggctgg aagacttccc ggtcttcacc cgcaaagtgc acacggatgt ctcctatatc 1921 gcctgcgccc gcaagctgct tgccgcgcgt gacgtcgtgt tcccgcaatt tgcgacccac 1981 aacgcccagt ccatggctac catctaccat ctcgctggtc cggacttcaa actcggtgat 2041 tacgagttcc agtgcctgca cggcatgggc gaaccgcttt acagcgaagt cgtcggcaag 2101 aaaaagctcg atcgtccctg ccgcttttat gcgcctgttg gcacccacga gacgctgctt 2161 gcctatctcg tccgccgtct gctggaaaac ggcgcgaact cctccttcgt caaccgcata 2221 gcagatcccg ccgtgccggt ggcttccctg ctggaagatc cggtcaccgt ggtcaaggct 2281 taccccgttc ccggcgcacg gcacgaccgc attgctgcac ccgctggtct cttcggcccc 2341 gaacgggcaa attccgccgg cctcgatctt tcgaatgaaa cggcacttgc cgcgctggac 2401 aacgtcctta aggcaggtgc gacgacggaa tggaaagccg cagcaccgca tgcaggcgga 2461 aagacacgcc cggtcctcaa tcccggcgac cacaatgatg tcgtcggtta tgtaaccgaa 2521 ccgacagagg ccgatgtcga agcggcaatg caacgggccg cagcctccaa ctggtcttcc 2581 acgccggtcg aggagcgcgc cgcctgcctg gagcgcgctg ccgaccggat gcaggccgaa 2641 atgccggccc tgcttggcct catcatgcgc gaggccggaa aatccatgcc gaacgccatt 2701 gccgaggtgc gcgaagcgat tgacttcctg cgttattacg cagcggaagc ccggaagacc 2761 ttcaaggcca acgagacacc gctcggcccg gtcgtctgca tcagcccgtg gaacttcccg 2821 cttgccatct tcatcggcca ggtaacggca gcactggttg ccggtaatcc ggtactggca 2881 aagcccgccg aagaaacccc gttgatcgcc gcgcaggggg tacgcctgct gcatgaggca 2941 ggcgttccgc aggacgccgt gcagcttctg ccaggtgacg gcaagaccgg tgcggcacta 3001 gtcggctcag cgctcacggc gggtgtgatg ttcaccggat ccactgaagt ggcgcggctc 3061 atccagggtc aactcgcagg ccgggttctc gcaaacggcc agcccgttcc cctgattgcc 3121 gagaccggcg gccagaacgc catgatcgtc gattcctcag cgcttgccga gcaggtcgtc 3181 gccgacgtca tcgcctctgc cttcgacagt gccggccagc gttgctcggc gcttcgcatt 3241 ctctgcctgc aggaagatgt ggccgaccga accctgacga tgctgaaggg cgcgctgcac 3301 gaattgcgca tcgggcgcac cgatagcctt tccgtcgatg tcggccccgt gatcaccgct 3361 gaagctaaag gcatcatcga aaaacacgtt gacagcatgc gcgcactcgg ccaccggatc 3421 gagcagattt cgcttgccgg cgaaaccggc aagggcacct tcgtgccacc gacaatcatc 3481 gagatgaaat cgctcgccga tcttaagaaa gaggtcttcg ggccggtgct gcacgtcatc 3541 cggttcaagc gcgacaatct cgaccggctg atcgacgaga tcaacgccac cggctatggc 3601 ctgaccttcg gcctgcatac gcgtcttgac gataccatcc agcatgtcct gtcgcgcgtc 3661 gcggccggta atctctatgt gaaccgcaac atcatcggcg ccgtggtcgg cgtccagccc 3721 tttggcgggc gaggcctctc cggcaccggc cccaaggcgg gcggtccgct ctatctcggc 3781 cgcgtcacac aaaccgcgcc gaagatcgac cgcgttgcca gccagcagga ccaggcggct 3841 gtcgatctcg cccgctggct ggatgaaaac ggccagagcg ttgcagccga agccgcaaga 3901 caggccgcag ccctatccgg cctcggtttc gaaaccgaac tggcaggccc agtcggcgaa 3961 cgcaacgtct atgcgctgca tccgcgcggc aaggtgctgc ttattccggc cacggagcaa 4021 gggctctatc gccagcttgc ggcagcgctt gccaccggca actcggtcgt tatcgataat 4081 gcgtcggggc tggaaaagtc gatctacgga ttgccggcaa ccgtcacctc gcgcatcaca 4141 tgggctgaca gctgggaaaa atccgcaccg ttcgccggcg cgctgatcga gggcgatgcg 4201 gaacgtgtcg ttgcgatcaa caagaaaatc cccgccctgc ccggtcctct ggttctggtt 4261 caggccgcca cgacggaagc gcttgaccgt gaaacccagc cctacaatct cgactggctg 4321 gtggaagaag tctccgtcag cgtcaacaca acggctgccg gcggcaatgc cagcctgatg 4381 agcatcggct gattatctgg ttccggcagg gtctcgaccc tgccggtcca tcacatcacc 4441 caccgatttc accacgaccg aaaagctggt tcagaacctg ctcttcaagc cgcgcgaatt 4501 c //