LOCUS BSU20909 6404 bp DNA linear BCT 23-FEB-1995 DEFINITION Bacillus subtilis permease system App operon AppD (appD), AppF (appF), AppA (appA), AppB (appB), and AppC (appC) genes, complete cds. ACCESSION U20909 VERSION U20909.1 KEYWORDS oligopeptide permease; oligopeptide transport system. SOURCE Bacillus subtilis subsp. subtilis str. 168 ORGANISM Bacillus subtilis subsp. subtilis str. 168 Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus. REFERENCE 1 (bases 1 to 6404) AUTHORS Koide,A. and Hoch,J.A. TITLE Identification of a second oligopeptide transport system in Bacillus subtilis and determination of its role in sporulation JOURNAL Mol. Microbiol. 13 (3), 417-426 (1994) PUBMED 7997159 REFERENCE 2 (bases 1 to 6404) AUTHORS Hoch,J.A. TITLE Direct Submission JOURNAL Submitted (10-FEB-1995) James Hoch, The Scripps Research Institute, 10666 N. Torrey Pines Road, La Jolla, CA 92037, USA FEATURES Location/Qualifiers source 1..6404 /organism="Bacillus subtilis subsp. subtilis str. 168" /mol_type="genomic DNA" /strain="168" /sub_species="subtilis" /type_material="type strain of Bacillus subtilis" /db_xref="taxon:224308" gene 658..1658 /gene="appD" regulatory 658..666 /regulatory_class="ribosome_binding_site" /gene="appD" CDS 672..1658 /gene="appD" /codon_start=1 /transl_table=11 /product="AppD" /protein_id="AAA62356.1" /translation="MSTLLEVNNLKTYFFRKKEPIPAVDGVDFHISKGETVALVGESG SGKSITSLSIMGLVQSSGGKIMDGSIKLEDKDLTSFTENDYCKIRGNEVSMIFQEPMT SLNPVLTIGEQITEVLIYHKNMKKKEARQRAVELLQMVGFSRAEQIMKEYPHRLSGGM RQRVMIAIALSCNPKLLIADEPTTALDVTIQAQVLELMKDLCQKFNTSILLITHDLGV VSEAADRVIVMYCGQVVENATVDDLFLEPLHPYTEGLLTSIPVIDGEIDKLNAIKGSV PTPDNLPPGCRFAPRCPKAMDKCWTNQPSLLTHKSGRTVRCFLYEEEGAEQS" gene 1636..2644 /gene="appF" regulatory 1636..1644 /regulatory_class="ribosome_binding_site" /gene="appD" CDS 1655..2644 /gene="appF" /codon_start=1 /transl_table=11 /product="AppF" /protein_id="AAA62357.1" /translation="MTAANQETILELRDVKKYFPIRSGLFQRKVGDVKAVDGVSFSLK KGETLGIVGESGCGKSTAGRTMIRLYKPTEGQILFKGQDISNLSEEKLRKSVRKNIQM VFQDPFASLNPRKTLRSIIKEPFNTHNMYTMRERNEKVEELLARVGLHPSFAGRYPHE FSGGQRQRIGIARALTLNPELIIADEPVSALDVSIQPQVINLMEELQEEFNLTYLFIS HDLSVVRHISDRVGVMYLGKMMELTGKHELYDNPLHPYTQALLSSVPVTRKRGSVKRE RIVLKGELPSPANPPKGCVFHTRCPVAKPICKEQIPEFKEAAPSHFVACHLYS" gene 2716..4363 /gene="appA" regulatory 2716..2723 /regulatory_class="ribosome_binding_site" /gene="appA" CDS 2732..4363 /gene="appA" /codon_start=1 /transl_table=11 /product="AppA" /protein_id="AAA62358.1" /translation="MKRRKTALMMLSVLMVLAIFLSACSGSKSSNSSAKKSAGKPQQG GDLVVGSIGEPTLFNSLYSTDDASTDIENMLYSFLTKTDEKLNVKLSLAESIKELDGG LAYDVKIKKGVKFHDGKELTADDVVFTYSVPLSKDYKGERGSTYEMLKSVEKKGDYEV LFKLKYKDGNFYNNALDSTAILPKHILGNVPIADLEENEFNRKKPIGSGPFKFKEWKQ GQYIKLEANDDYFEGRPYLDTVTYKVIPDANAAEAQLQAGDINFFNVPATDYKTAEKF NNLKIVTDLALSYVYIGWNEKNELFKDKKVRQALTTALDRESIVSQVLDGDGEVAYIP ESPLSWNYPKDIDVPKFEYNEKKAKQMLAEAGWKDTNGDGILDKDGKKFSFTLKTNQG NKVREDIAVVVQEQLKKIGIEVKTQIVEWSALVEQMNPPNWDFDAMVMGWSLSTFPDQ YDIFHSSQIKKGLNYVWYKNAEADKLMKDAKSISDRKQYSKEYEQIYQKIAEDQPYTF LYYPNNHMAMPENLEGYKYHPKRDLYNIEKWWLAK" gene 4223..5392 /gene="appB" regulatory 4223..4430 /regulatory_class="ribosome_binding_site" /gene="appB" CDS 4439..5392 /gene="appB" /codon_start=1 /transl_table=11 /product="AppB" /protein_id="AAA62359.1" /translation="MAAYIIRRTLMSIPILLGITILSFVIMKAAPGDPMTLMMDPKIS QADREQFIEKYGLNDPQYVQYLKWLGNMVQGDFGTSIVRKGTPVSELIMARLPNTLLL MLVSTILALMISIPFGVLSAKRPYSKIDYGITFTSFIGLAIPNFWFGLILIMVLSVNL GWFPTGGVETLNTEFNIFDRIHHLILPAFVLATADMAGLTRYTRSNMLDVLNQDYIRT ARAKGFKENRVLFKHGLRNALLPVITIFGLMIPSFIGGSVVVEQIFTWPGLGKLFVDS AFQRTIIRIIMAMTVISAVLVVVGNLIADILYAIVDPRIEY" gene 5392..6320 /gene="appC" regulatory 5392..5399 /regulatory_class="ribosome_binding_site" /gene="appC" CDS 5409..6320 /gene="appC" /codon_start=1 /transl_table=11 /product="AppC" /protein_id="AAA62360.1" /translation="MSELQTTPSPEIRLKENISKKPETMTKIFWEKFSKNKLAILGAV ILFIIIMSAVFAPLIAPYPQEQQSLLDKYKAPGLEHLMGTDKFGRDIFSRILYGARVS LLVGFASVVGSILIGTVLGALAGYFRGIVDAVIMRVVDIVLSIPDIFLLITLVTIFKP GVDKLILIFCLTGWTTTARLVRGEFLSLRSREYVLAAKTIGTKTHKIIFSHILPNALG PIIVSATLKVGSVILAESALSYLGFGIQPPIASWGNMLQDAQNFTVMIQAWWYPLFPG LFILMTVLCFNFVGDGLRDALDPKNIK" BASE COUNT 1971 a 1268 c 1446 g 1719 t ORIGIN 1 gaattcggat caaaatcagg actcgccttt caagacaaaa tgttcctttt tctttcgtca 61 gatttagatt ttgggtcggt atctgccctt atgacgcatg agtatcatca cgtttgccgg 121 ttaggtcatc tgacaaaaga ggaaaaggat gtcacattac ttgatacaat catcatggaa 181 gggctggcgg aatatgctgt ttatgagagg ttcggccgaa gtcaaacggc tgaatggacg 241 acttggtata caccggaaca gcttcaggct ttatatgaaa aaaagattgc gccccatcgg 301 gatatcaaac gggataatcg attatttccc cagctgttat tcggcaaagg atatcagcca 361 aaaatgcttg gatacgcagt tggattcaat attgtaaaaa aatatttaac cgccagcaag 421 gcaagcaccg cagacgggct gtccattcct gctgagacct ttttggatgc aatgctttaa 481 aaggataaaa taatggaatt tcattaataa tattacattt atcctaaaaa attcttgatt 541 ttgcaaaatg attgtaataa tatacaacta taaaattttt cgataattca atattattta 601 ttatttctga ataaagggat tgctttctct tgaaaacgtt tgacaacaag aggggggaaa 661 ggggagctag catgagcaca cttttagaag tgaataattt aaagacttat tttttcagga 721 aaaaggagcc gatccctgcg gttgacggag tcgattttca catcagcaaa ggcgaaaccg 781 tcgcgcttgt aggtgaatcg ggctccggaa aaagcattac ttctttatca attatgggcc 841 tcgtccaaag ctcaggcgga aaaatcatgg acggctctat taaactcgaa gacaaagacc 901 tcacctcatt cactgaaaac gattattgca aaatccgcgg taacgaagta tccatgatct 961 ttcaggaacc aatgacctcc cttaatccgg tgttaacaat cggagaacaa attaccgaag 1021 tgctgattta ccataaaaac atgaagaaaa aagaagcccg tcaacgagct gttgaactct 1081 tgcagatggt cggtttctcc cgggcggagc aaattatgaa ggagtacccg catcggctgt 1141 ccggcggtat gagacagagg gtgatgattg ccatcgcact gagctgtaat cctaaactgc 1201 tcattgctga tgaaccaacg acagcgctgg acgtgacaat acaagcccag gtgctggagc 1261 tcatgaaaga tctctgtcag aagttcaata catcgattct tctcatcaca cacgacttag 1321 gtgtcgtgtc tgaagctgcc gatagagtga ttgtcatgta ctgcggacaa gtcgtagaaa 1381 acgccactgt tgatgactta tttttagaac cgcttcatcc gtatacagaa ggcctgctta 1441 cgtcaattcc tgttatagat ggagagattg ataaattaaa tgcgattaaa ggcagtgtgc 1501 ctacaccgga taatctgccg ccggggtgcc gttttgcccc aaggtgcccg aaagctatgg 1561 ataagtgctg gacaaatcag ccttcgcttt tgacacacaa aagcggaaga acggtgagat 1621 gctttttata tgaggaagag ggtgccgaac aatcatgaca gcagctaatc aagaaacaat 1681 cttagagctt cgtgacgtaa aaaaatactt tccgatccgg tcaggccttt ttcaaagaaa 1741 agtcggtgat gtaaaagcgg tggatggtgt ttcattttcg ttaaaaaaag gagaaacact 1801 cggaatcgtt ggagagtcgg gctgcggaaa atcgactgcc ggcagaacga tgatcagact 1861 gtacaaaccg acagagggcc aaattctttt taaagggcag gatatttcca atctgtcaga 1921 ggagaagctg cggaagagtg tccgcaaaaa tattcaaatg gttttccaag atccatttgc 1981 ttcgttaaac ccgagaaaga ccctgcgttc catcataaag gagccgttta atacgcacaa 2041 catgtatacc atgcgtgaac gaaacgaaaa agttgaagag ctgcttgcaa gagtagggct 2101 tcacccgtcg tttgccggcc gttatcccca tgagttttca ggcggccagc gtcagcggat 2161 cggcattgcc agagcactca ctttgaatcc agagctgatc attgcagatg agccggtttc 2221 cgcacttgat gtatccattc agccccaagt gattaacttg atggaggaat tacaggaaga 2281 atttaatctt acgtatctat ttatctctca tgatctgagt gtcgtccgcc atatcagcga 2341 cagagtcgga gtaatgtatc ttggcaaaat gatggaactg accggcaagc atgagcttta 2401 tgacaacccg cttcacccat atacccaagc gcttttatcc tccgttccgg ttacaagaaa 2461 aagaggttct gtcaaacgtg aacgcattgt cctgaaggga gaactgccta gtccggccaa 2521 cccgccaaaa ggctgcgtat tccacacaag atgtcctgtt gcaaaaccga tatgcaagga 2581 acaaatacca gaatttaaag aagctgctcc cagccacttt gtggcttgtc acctttatag 2641 ctaatgttgc ccgcacagct ttgagagggg gtatgcacac tacataaaca acagcctaga 2701 agaacgaaca tttcaagagg gggaatatct aatgaaaaga cggaaaaccg cactgatgat 2761 gctaagtgta ttgatggttc tggccatctt tttatcagcc tgctcgggat caaaatcaag 2821 caacagcagc gcgaaaaaat cagcaggcaa accgcagcaa ggcggggatt tggttgttgg 2881 ttcaatcgga gaacccacac tttttaactc tctgtattct accgatgacg caagtacgga 2941 tattgaaaat atgctgtaca gctttttaac gaaaacggat gaaaaactaa atgtgaaatt 3001 gtcactcgct gaaagcatta aagaattaga cggcggcctt gcatatgatg tgaaaattaa 3061 aaaaggcgtt aagtttcatg acggaaaaga actgactgca gacgacgtcg tatttacgta 3121 cagtgtccct ttaagcaaag attacaaggg agaacgcggt tcaacatatg aaatgctgaa 3181 atccgtagaa aaaaaaggcg attacgaagt cttgtttaag ctgaaatata aagacggtaa 3241 tttctacaac aatgcgttag acagcacagc tattctgccg aaacatattc tcggtaatgt 3301 tccgattgct gatttagaag aaaatgagtt taacagaaag aaaccaatcg gttcaggacc 3361 atttaagttt aaggaatgga agcagggcca atatattaag ctcgaagcga atgatgatta 3421 ctttgaagga agaccgtatt tagatactgt gacgtataaa gtcattcctg acgcaaatgc 3481 tgccgaagct cagctgcagg caggcgatat taatttcttt aatgtgcccg ccactgacta 3541 caaaacggct gaaaaattca acaacctaaa aatcgttact gatttggcat taagttatgt 3601 gtacatcggg tggaatgaaa aaaatgaatt attcaaggat aaaaaggttc gtcaagcgct 3661 aacaaccgct cttgaccgcg agtcaatcgt cagccaagta ttagatggag acggcgaggt 3721 agcttacatt ccggaaagcc ctttatcttg gaactatcct aaagatatag atgttccgaa 3781 atttgagtac aacgagaaaa aagcgaaaca gatgcttgca gaagccggct ggaaagatac 3841 gaacggtgac ggcattctgg ataaagacgg aaagaaattc tcgtttaccc ttaaaacgaa 3901 ccaaggaaac aaagtccgtg aagacatcgc tgtcgtcgtt caggaacagc tgaaaaaaat 3961 cggcattgaa gtgaaaaccc agatcgttga atggagcgct ctcgttgaac aaatgaatcc 4021 tccgaattgg gattttgatg caatggtcat gggatggagt ttatccacat tcccggatca 4081 atatgatatt ttccattcaa gccagattaa aaagggtttg aactacgttt ggtataaaaa 4141 tgccgaagcg gataaactca tgaaagatgc aaaatcaatc agtgacagaa agcagtattc 4201 aaaagaatat gagcaaatct atcaaaaaat tgcggaagat cagccgtata cgttcttgta 4261 ttatcctaac aaccatatgg caatgccgga aaatcttgaa ggatacaaat atcatccgaa 4321 acgtgatttg tataatattg aaaaatggtg gcttgcaaaa taaatttccc ttaaagggga 4381 gggagagcgt tttctccctc ttctgttttt aataaggaaa gtaaaggggg acaagtatat 4441 ggctgcatat attatcagaa gaaccttaat gtctatcccg attttattgg gaattacgat 4501 tttatcattt gttatcatga aagccgcgcc cggagatccg atgacattaa tgatggaccc 4561 gaaaatcagc caggctgaca gagagcagtt tattgaaaaa tacggtctga atgatcctca 4621 gtacgttcaa tatttaaagt ggctaggcaa catggtgcag ggtgatttcg gaacgtctat 4681 tgtcagaaaa ggaacgcctg tttcagaatt gattatggca agactaccca atacgctcct 4741 gctgatgctg gtttcaacga ttttggctct tatgatttct attccgttcg gtgtcctgtc 4801 ggcaaagcgg ccgtattcaa aaatcgacta tggcattaca tttacctcgt ttataggcct 4861 ggctattcca aacttttggt ttggattaat tttgattatg gtgttatcgg taaatctcgg 4921 ctggtttcca actgggggtg tcgagacact gaataccgaa ttcaatatat ttgaccggat 4981 tcatcattta attctgcctg cattcgttct agctacagct gacatggccg gactgacgag 5041 atacacgaga tccaatatgc ttgatgtatt aaatcaagat tatattcgca cagcgagagc 5101 aaaaggattt aaagagaaca gagtgctatt taaacatgga ttgaggaatg cattattacc 5161 cgtcattaca attttcggtt tgatgattcc ttcatttatc ggcggatctg tcgttgtcga 5221 acaaattttc acttggccgg gattaggaaa gctgtttgtc gattcagcat tccagcgcac 5281 gattatccgg attatcatgg caatgactgt gatctcggcg gttcttgtcg ttgtcggaaa 5341 cctcattgca gacatccttt acgcgattgt tgatccgcgg atcgaatatt aaaaggaggg 5401 aaacagagat gtcagagctg caaacaactc cctcgccgga gatcaggctg aaagaaaata 5461 tttcgaaaaa gccagaaaca atgacaaaga ttttctggga aaaattctcg aaaaacaaac 5521 tggccatttt aggtgccgtt attcttttta tcattattat gtctgctgtt ttcgcccctt 5581 taattgcacc ttatccccaa gagcagcaaa gcctgcttga taaatataag gcgccgggcc 5641 ttgaacatct gatgggaacg gataaatttg gacgtgatat tttcagccgg atcctatatg 5701 gagcgcgtgt ctctttattg gttggatttg cgtccgtagt cggttcgatt ttgatcggaa 5761 cggttttagg agcattagcc ggatatttca gaggaatagt ggatgctgtc attatgcgtg 5821 tagttgacat tgtgttatcc attcctgata ttttcttgtt gatcacgctg gtcaccatct 5881 tcaagccggg tgtggacaaa ttgattttaa ttttctgtct cacaggatgg accacaacag 5941 cacgattagt aaggggagaa ttcttgtcgc tccgttcaag ggaatatgtt cttgctgcta 6001 aaacaattgg aacaaaaacg cacaaaatta ttttttctca tatcctgccc aatgcgttag 6061 ggccgattat cgtgtcagct acgctgaaag ttgggtctgt tattctagct gaatcggcgc 6121 taagctactt gggctttgga atccagccgc caatcgctag ctgggggaac atgcttcaag 6181 acgcacagaa tttcacagta atgattcaag catggtggta cccgttattt cccgggctat 6241 ttattttaat gaccgtttta tgcttcaact ttgtcggtga tggcctgcgg gatgcgcttg 6301 acccgaaaaa tattaaataa aaatgaatat catatctgtt ataaaatatc accaaatcag 6361 aaaaaagcag gtctccttta gtcagaaaat atacaaagag atcc //