LOCUS AH003326 3877 bp DNA linear ROD 10-JUN-2016 DEFINITION Rattus norvegicus clone RG2 cytochrome P-450c27/25 gene, complete cds. ACCESSION AH003326 U17363 U17369 U17370 U17371 U17372 U17373 U17374 U17375 U17376 VERSION AH003326.2 KEYWORDS . SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 3877) AUTHORS Su,P., Rennert,H., Shayiq,R.M., Yamamoto,R., Zheng,Y.M., Addya,S., Strauss,J.F. III and Avadhani,N.G. TITLE A cDNA encoding a rat mitochondrial cytochrome P450 catalyzing both the 26-hydroxylation of cholesterol and 25-hydroxylation of vitamin D3: gonadotropic regulation of the cognate mRNA in ovaries JOURNAL DNA Cell Biol. 9 (9), 657-667 (1990) PUBMED 2175615 REFERENCE 2 (bases 1 to 3877) AUTHORS Shayiq,R.M. and Avadhani,N.G. TITLE Sequence complementarity between the 5'-terminal regions of mRNAs for rat mitochondrial cytochrome P-450c27/25 and a growth hormone-inducible serine protease inhibitor. A possible gene overlap JOURNAL J. Biol. Chem. 267 (4), 2421-2428 (1992) PUBMED 1733943 REFERENCE 3 (bases 1 to 3877) AUTHORS Mullick,J., Addya,S., Sucharov,C. and Avadhani,N.G. TITLE Localization of a transcription promoter within the second exon of the cytochrome P-450c27/25 gene for the expression of the major species of two-kilobase mRNA JOURNAL Biochemistry 34 (42), 13729-13742 (1995) PUBMED 7577965 REFERENCE 4 (bases 1 to 3877) AUTHORS Avadhani,N.G. TITLE Direct Submission JOURNAL Submitted (18-NOV-1994) Naravan G. Avadhani, Department of Animal Biology, University of Pennsylvania School of Veterinary Medicine, 3800 Spruce Street, Philadelphia, PA 19104, USA COMMENT On or before Jun 10, 2016 this sequence version replaced U17376.1, U17363.1, U17369.1, U17370.1, U17371.1, U17372.1, U17373.1, U17374.1, U17375.1, AH003326.1. FEATURES Location/Qualifiers source 1..3877 /organism="Rattus norvegicus" /mol_type="genomic DNA" /db_xref="taxon:10116" /clone="RG2" /note="in lambda DASH vector" 5'UTR 1..776 mRNA join(777..1193,<1310..1500,1617..1816,1933..2011, 2127..2245,2361..2533,2650..2715,2718..2815,2932..3013, 3130..3342,3491..3877) exon 777..1193 /number=2 CDS join(882..1193,1337..1500,1617..1816,1933..2011, 2127..2245,2361..2533,2650..2715,2718..2815,2932..3013, 3130..3342,3491..3607) /citation=[1] /citation=[2] /codon_start=1 /product="cytochrome P-450c27/25" /protein_id="AAA86314.1" /translation="MGRVVSGSKLLASQTRSMAVLSRMRLRWALLDTRVMGHGLCPQG ARAKAAIPAALRDHESTEGPGTGQDRPRLRSLAELPGPGTLRFLFQLFLRGYVLHLHE LQMWTTTFGTRTNVNLASAPLLEQVMRQEGKYPIRDSMEQWKEHRDHKGLSYGIFITQ GQQWYHLRHSLNQRIVKPAEAALYTDALNEVISDFIARLDQVRTESASGDQVPDVANL LYHLALEAICYILFEKRVGCLEPSIPEDTATFIRSVGLMFKNSVYVTFLPKWSRPLLP FWKRYMNNWDNIFSFGEKMIHQKVQEIEAQLQAAGPDGVQVSGYLHFLLTKELLSPQE TVGTFPELILAGVDTTSNTLTWALYHLSKNPHIQEALKEVTGVVPFGKVPQNKDFAHM PLLKAVIPETLRLYPVVPTNSRIITEKETEINGFLFPKNTQFVLCHYVVSRDPSVFPE PESFQPHRWLRKREDDNSGIQHPFGSVPFGYGVRSCLGRRIAELEMQLLLSRLIQKYE VVLSPGMGEVKSVSRIVLVPSKKVSLRFLQRQ" intron 1194..1201 /number=3 gap 1202..1301 /estimated_length=unknown intron <1302..1309 /number=3 exon 1310..1500 /number=3 intron 1501..>1508 /number=4 gap 1509..1608 /estimated_length=unknown intron <1609..1616 /number=4 exon 1617..1816 /number=4 intron 1817..>1824 /number=5 gap 1825..1924 /estimated_length=unknown intron <1925..1932 /number=5 exon 1933..2011 /number=5 intron 2012..>2019 /number=6 gap 2020..2119 /estimated_length=unknown intron <2120..2126 /number=6 exon 2127..2245 /number=6 intron 2246..>2253 /number=7 gap 2254..2353 /estimated_length=unknown intron <2354..2360 /number=7 exon 2361..2533 /number=7 intron 2534..>2541 /number=8 gap 2542..2641 /estimated_length=unknown intron <2642..2649 /number=8 exon 2650..2815 /number=8 intron 2816..>2823 /number=9 gap 2824..2923 /estimated_length=unknown intron <2924..2931 /number=9 exon 2932..3013 /number=9 intron 3014..>3021 /number=10 gap 3022..3121 /estimated_length=unknown intron <3122..3129 /number=10 exon 3130..3342 /number=10 intron 3343..3490 /number=11 exon 3491..3877 /number=11 3'UTR 3608..3877 BASE COUNT 738 a 814 c 826 g 699 t ORIGIN 1 gttgttgaga taggagggtt gactaactct agctgacctg ggagttgcta tgtagatcag 61 actagcctgg aactcacaga gttcacttgc ttctgcctca caaatactgg aattaaaggc 121 ttatgccacc ataattggct catacaaatc tttaatccct gcactctgga ggttggggca 181 ggaaggtgga gaattgagcc cacggtggcc tacatgatga gactatgtgt taaacccaaa 241 acaaaacata acaaaacggg aaaacgaaaa cgaaatccaa aacccaggga aacgaaaacc 301 aaaatccaaa tccctaaatc tgttctccaa aagcgatgat gacacttaaa gaaaaaaaaa 361 tccctaatac ccgcaacttt gtttttgttt tccttctcct gggccttcac atgaccttgg 421 ctgcttgaac tgctctggct ctccagttcc acaatcagcc tcagcctcgg gggaacaaca 481 gcgggttccc ccggccatct ggaaagtgag ggacaccgag atggcgctct gcaggtcaag 541 caaaggcgag cctagctggg tggggcctga gggacttgga agttgactgc tgtgctcccc 601 ctcacaattg gaagccagcg aagttcttga gaatccgtgg aggaggaggc tgctaccgcc 661 agagagctcc gaacttttcc ctaggccacc ttgtccacct ctgcctgcct tcttagtagg 721 ggtcttgcag ctggagaagg ttgcatttgt gtgttcgaca catcctgatt ggaaggggtt 781 atgaaaggat ctcgcttgtc ctctatcggc ccgccccggg atcacctctg cctttaaagt 841 cgccaggtcg cgcaaagctg gagttctgcc tccttgcctg gatggggcgc gtagtctctg 901 gctctaaact cttggcttct cagacacgat ctatggctgt gttgagccgc atgagactga 961 gatgggcgct tctggacact cgtgtgatgg gccatggcct ctgcccacaa ggggccagag 1021 ccaaggccgc gatccctgca gccctccggg atcacgagag cacggagggt ccaggaacag 1081 gtcaagaccg accgcgcctg cggagtctgg cggagcttcc gggacccgga acgctacgct 1141 ttttattcca gctatttcta cgaggctatg tgctgcactt gcacgagctc caggtaacta 1201 cnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1261 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nacccacagg cgctagacaa 1321 ggccaagtac ggcccaatgt ggacaaccac ctttgggact cgcaccaatg tgaatctggc 1381 tagcgccccg ctcttggagc aagtgatgag acaggagggc aagtacccca taagagacag 1441 catggagcag tggaaggagc accgagacca caaaggcctc tcctatggga tcttcatcac 1501 gtgagttgnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1561 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnntc ccccagacaa 1621 ggacagcagt ggtaccatct gcgtcatagt ttgaatcagc ggatcgtgaa gcctgctgag 1681 gcagccctct acacagatgc cttaaacgag gtcatcagtg actttattgc ccggctggac 1741 caggtgcgga cagagagtgc atcaggggat caggtgccag atgtggccaa tcttctctac 1801 caccttgcct tggaaggtag cctcnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1861 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1921 nnnnctttgc agccatctgc tatatcctgt ttgagaaaag ggttggctgc ctggagccct 1981 ccatccctga ggacaccgcc accttcatca ggttcagcgn nnnnnnnnnn nnnnnnnnnn 2041 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2101 nnnnnnnnnn nnnnnnnnna cgtcagatct gttggactca tgttcaagaa ctcagtctat 2161 gtcactttcc ttcccaagtg gtctcggcct ctgctgccct tttggaagcg atacatgaat 2221 aactgggata acattttctc cttcggtgag gtgnnnnnnn nnnnnnnnnn nnnnnnnnnn 2281 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2341 nnnnnnnnnn nnncatgcag gggagaagat gattcatcaa aaagtccagg agatagaagc 2401 ccagctacag gcggctgggc cagatggggt ccaggtatct ggctacctgc acttcctgct 2461 gactaaggaa ttgctcagtc ctcaagagac tgtcggcacc tttcctgagc tgatcttggc 2521 tggggtagac acggtcaggc tnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2581 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2641 ntttcctaga catccaatac actgacctgg gccctgtatc acctttcaaa gaacccacac 2701 atccaggaag ccttgacaag gaagtgactg gtgtggtacc cttcgggaag gtgccccaga 2761 acaaggactt tgcccacatg cccctgctaa aagctgtgat tccggagacc ctgcggtcat 2821 tcgnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2881 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnccctgca gcctctaccc 2941 tgtggttccc acaaactccc ggatcatcac agaaaaggaa actgaaatta atggcttcct 3001 cttccctaag aatgtgagtg gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3061 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3121 nctctgtaga cacagtttgt gttatgccac tacgtggtgt cccgagatcc cagtgtcttt 3181 cctgagcccg agagcttcca gcctcaccga tggctgagga agagagagga cgataactcc 3241 gggatccaac acccatttgg ctctgtgccc tttggctatg gggttcggtc ctgcctgggt 3301 cgcaggattg cagaactgga gatgcaactc ctgctgtcaa gggtgagcag agaatgtgga 3361 gggctgtgtg ggtcaggtaa gatggaggga tttggggaga ggagaggcaa ggaggtccag 3421 ggtaggagcc tacaagggaa caggaactgg agattaagag tctagtggcc ctgccctctc 3481 tccctgacag ctgatacaaa agtatgaggt ggtcctgtct cccgggatgg gagaagtgaa 3541 gtctgtgtcc cgcatcgtcc tggttcccag caagaaggtg agcctacgct ttctgcagag 3601 acagtagtac caagctgggc tcctgtctcc atgggacttg tcagaagccc tggcacagaa 3661 gttcttggcc agtctcacgt cacatgtcac gatgccagat tcaacagggg acctctctgc 3721 cttcccatag acaccagacg tctggcacaa tctctactgc gcagcaccca tttaagacat 3781 tagagcacct catatcacag gacggtgctt gggtacaatt taaaataaaa tttaaaattc 3841 aaatttgggg gagcctttgt tgttctatgg cttaccc //