LOCUS MMU05252 2922 bp mRNA linear ROD 31-MAR-1994
DEFINITION Mus musculus nuclear matrix attachment DNA-binding protein SATB1
mRNA, complete cds.
ACCESSION U05252
VERSION U05252.1
KEYWORDS .
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 2922)
AUTHORS Nakagomi,K., Kohwi,Y., Dickinson,L.A. and Kohwi-Shigematsu,T.
TITLE A novel DNA-binding motif in the nuclear matrix attachment
DNA-binding protein SATB1
JOURNAL Mol. Cell. Biol. 14 (3), 1852-1860 (1994)
PUBMED 8114718
REFERENCE 2 (bases 1 to 2922)
AUTHORS Kohwi-Shigematsu,T.T.
TITLE Direct Submission
JOURNAL Submitted (19-JAN-1994) Terumi T. Kohwi-Shigematsu, La Jolla Cancer
Research Foundation, 10901 North Torrey Pines Road, La Jolla, CA
92037, USA
FEATURES Location/Qualifiers
source 1..2922
/organism="Mus musculus"
/mol_type="mRNA"
/db_xref="taxon:10090"
/tissue_type="thymus"
CDS 199..2493
/codon_start=1
/product="SATB1"
/protein_id="AAA17372.1"
/translation="MDHLNEATQGKEHSEMSNNVSDPKGPPAKIARLEQNGSPLGRGR
LGSTGGKMQGVPLKHSGHLMKTNLRKGTMLPVFCVVEHYENAIEYDCKEEHAEFVLVR
KDMLFNQLIEMALLSLGYSHSSAAQAKGLIQVGKWNPVPLSYVTDAPDATVANMLQDV
YHVVTLKIQLHSCPKLEDLPPEQWSHTTVRNALKDLLKDMNQSSLAKECPLSQSMISS
IVNSTYYANVSAAKCQEFGRWYKHFKKTKDMMVEMDSLSELSQQGANHVNFGQQPVPG
NTAEQPPSPAQLSHGSQPSVRTPLPNLHPGLVSTPISPQLVNQQLVMAQLLNQQYAVN
RLLAQQSLNQQYLNHPPPVSRSMNKPLEQQVSTNTEVSSEIYQWVRDELKRAGISQAV
FARVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEAERDRIYQDERER
SLNAASAMGPAPLLSTPPSRPPQVKTATLATERNGKPENNTMNINASIYDEIQQEMKR
AKVSQAPFAKVAATKSQGWLCELLRWKEDPSPENRTLWENLSMIRRFLSLPQPERDAI
YEQESNAVHHHGDRPPHIIHVPAEQIQQQQQQQQQQQQQQQPPPPPPQPQPQPQAGPR
LPPRQPTVASSAESDEENRQKTRPRTKISVEALGILQSFIQDVGLYPDEEAIQTLSAQ
LDLPKYTIIKFFQNQRYYLKHHGKLKDNSGLEVDVAEYKDEELLKDLEESVQDKNANT
LFSVKLEEELSVEGSTDVNADLKD"
misc_feature 1036..1485
/note="DNA-binding domain"
polyA_site 2922
/note="13 A's in submitted sequence"
BASE COUNT 781 a 782 c 744 g 615 t
ORIGIN
1 tcaagttgcc attaacttcc gcggcggccg ccagctcggc ggcggggagg tggcagcagc
61 tgcagccgcc gcccgggaag tccgccgccc ggcgcgcccg cgcggggagc cgacccggcc
121 tcggcccgca ccgctggccc gcgctgtccc ggttccacgc ctgattctgg caggtgatct
181 gtaagacagt gactgagtat ggatcatttg aacgaggcaa ctcaggggaa agaacattca
241 gaaatgtcta acaatgtgag tgatccgaag ggtccacccg ccaagattgc ccgcctggag
301 cagaacggga gccctctagg aagaggaagg cttgggagca caggtggaaa gatgcaggga
361 gtgcctttaa aacactcggg ccatctcatg aaaaccaacc ttaggaaagg aaccatgtta
421 ccagttttct gcgtggtgga acattatgaa aacgccattg agtatgattg caaggaggag
481 cacgcggaat ttgtattggt gagaaaggat atgcttttca accagctgat agagatggcg
541 ttgctgtctc taggctattc acacagctct gctgcccaag ccaaagggct catccaggtt
601 gggaagtgga atccagttcc actgtcgtat gtgacagatg cccctgatgc cacggtggca
661 aacatgcttc aagatgtgta tcatgtggtc accctcaaaa ttcagttaca cagttgccct
721 aaactagaag acttgcctcc tgaacaatgg tcgcacacca cagtaaggaa tgctctgaag
781 gacttactga aagatatgaa ccagagttcg ttggccaagg agtgccccct ttcacagagc
841 atgatctcct ccattgtgaa cagcacgtac tatgcaaatg tctcagcagc aaaatgtcaa
901 gaatttggaa ggtggtacaa acatttcaag aagacaaagg atatgatggt tgagatggat
961 agtctgtctg aactatccca gcaaggtgcc aaccacgtca attttggcca gcagcctgtc
1021 ccaggaaaca cagctgagca gcctccatcc cctgcgcagc tctctcacgg cagtcagccc
1081 tctgtccgga cccctcttcc gaacctgcac cctgggcttg tgtcaacacc gatcagtcct
1141 cagctggtca accaacagct ggtgatggct cagttgctga accagcagta tgcagtgaac
1201 agactcttag cccagcagtc cttaaaccaa cagtacttga accaccctcc ccctgtcagt
1261 aggtctatga acaagccttt ggagcagcaa gtttccacaa acacggaggt ctcttctgaa
1321 atctaccagt gggtgcggga tgaactgaaa cgagccggaa tctcacaggc agtatttgca
1381 cgcgtggctt ttaaccgaac tcagggattg ctttctgaaa tcctccgaaa ggaagaggac
1441 cccaagactg catcccagtc tctgctggta aaccttcggg ctatgcagaa tttcttacag
1501 ttgccggaag ccgaaagaga ccggatatac caggatgaga gggaaaggag cttgaacgca
1561 gcctcagcca tgggtcctgc cccgctgctg agcacaccac ccagccgccc tccccaggtg
1621 aaaacagcta cccttgccac tgagagaaat gggaagccag agaacaatac tatgaacatt
1681 aatgcctcca tttatgatga gattcagcag gaaatgaagc gtgctaaagt gtcccaagca
1741 ccgtttgcaa aggttgccgc cacaaaaagc cagggatggc tgtgtgagct gttgcgctgg
1801 aaagaagatc cttctccaga aaacaggacc ctgtgggaga acctgtcgat gatccgaaga
1861 ttcctcagtc tgcctcagcc tgagcgcgat gccatctatg agcaggagag caatgctgtg
1921 catcaccatg gcgacagacc tccccacatc atccacgttc cagcagaaca gattcagcag
1981 cagcaacagc agcagcagca acagcagcag cagcagcagc caccgccgcc accgccgcag
2041 ccacagccac agccccaggc aggccccaga ctccccccac ggcagcccac cgtggcctcc
2101 tccgcggagt ccgatgagga aaaccggcag aagaccaggc cacgaaccaa aatttccgtg
2161 gaagccctgg ggatccttca gagtttcatc caagatgtgg gcctgtaccc agatgaagag
2221 gctatccaga ctctgtctgc acagctggac ctcccgaagt acaccatcat caagttcttt
2281 cagaaccagc ggtactacct taagcaccat ggcaagctga aggacaactc cggcttggag
2341 gtggatgtgg ccgagtacaa agatgaggag ttgcttaagg atttggaaga gagcgtccag
2401 gataaaaacg ccaacaccct tttctcagtg aaactagagg aagagctgtc ggtggaaggg
2461 agcacagacg ttaatgccga cttgaaagac tgagagaaca gtattctttt cagccacacc
2521 accggtattt cctaacaaca tgagaagtcc accttgtgtt cactcagaca aaccttcatt
2581 gtttattgtt tggccaatga atcttcggaa acttgcacaa acaggaagga agttggaagg
2641 acaggacagc cagcactcaa ggttttactg tgttttacaa aactgcttgg cagccccggg
2701 tgaagcgtca aggactgttt ggtagaattt gtgttcaagg gctgcaccca ggtgttgtac
2761 cctgtcagca tgataccaga aattggtttt ccttttgatt attattattc tggagcctca
2821 aataagcatt ataacttctg tggttatgat tgccttttct ttagtaattc ttctgtaacc
2881 cgccacacta gtctttggaa actggcccct tattttaaag ag
//