LOCUS AH004429 2997 bp DNA linear PLN 10-JUN-2016 DEFINITION Zea mays subsp. mays PsbB operon, partial sequence; chloroplast. ACCESSION AH004429 S67282 S67283 S67284 VERSION AH004429.2 KEYWORDS . SOURCE chloroplast Zea mays subsp. mays (maize) ORGANISM Zea mays subsp. mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea. REFERENCE 1 (bases 1 to 2997) AUTHORS Freyer,R., Hoch,B., Neckermann,K., Maier,R.M. and Kossel,H. TITLE RNA editing in maize chloroplasts is a processing step independent of splicing and cleavage to monocistronic mRNAs JOURNAL Plant J. 4 (4), 621-629 (1993) PUBMED 8252066 COMMENT On or before Apr 6, 2016 this sequence version replaced S67282.1, S67283.2, S67284.1, AH004429.1. FEATURES Location/Qualifiers source 1..2997 /organism="Zea mays subsp. mays" /organelle="plastid:chloroplast" /mol_type="genomic DNA" /sub_species="mays" /db_xref="taxon:381124" /dev_stage="seedlings" operon <1..>2997 /operon="PsbB" gene <1..1523 /gene="petB" /operon="PsbB" exon <1..126 /gene="petB" CDS join(121..126,882..1523) /gene="petB" /operon="PsbB" /exception="RNA editing" /codon_start=1 /transl_table=11 /product="PetB" /protein_id="AAB29194.1" /translation="MSKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCF LVQVATGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVF RVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPV IGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL" gap 137..808 /estimated_length=672 exon 882..1713 gene 1706..2932 /gene="petD" /operon="PsbB" CDS join(1706..1713,2458..2932) /gene="petD" /operon="PsbB" /note="mismatch(99[V->L]); conceptual translation in entry does not agree with translation in paper" /codon_start=1 /transl_table=11 /product="PetD" /protein_id="AAB29195.2" /translation="MGVTKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVI LGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMV SVPTGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF " gap 1724..2445 /estimated_length=722 exon 2458..>2932 /gene="petD" BASE COUNT 420 a 292 c 342 g 549 t ORIGIN 1 aactaaaact atgacttcat agtttttcca tccaaaaaaa gcctttctac tttaagctcc 61 acatttctag acattctggt agttcgaccg tggatttttt tgttttggta tctctggaat 121 atgagtgtgt gacttgnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 181 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 241 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 301 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 361 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 421 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 481 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 541 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 601 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 661 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 721 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 781 nnnnnnnnnn nnnnnnnnnn nnnnnnnngc ttgagccgta cgagatgaaa ttttcatata 841 cggttctcgg agggggagtc gggctagtta cctatctcaa taaagtatat gattggtttg 901 aagaacgtct tgagattcag gcaattgcag atgatataac tagtaaatat gttcctcctc 961 atgtcaacat attttattgt ttagggggaa ttacacttac ttgttttcta gtacaagtcg 1021 ctaccggttt tgctatgact ttttactacc gaccgaccgt tacagaggct ttttcctccg 1081 ttcaatatat aatgacggag gccaactttg gttggttaat ccgatcggtt catcgatggt 1141 cagcaagtat gatggttcta atgatgatcc tgcacgtatt tcgtgtgtat ctcacaggtg 1201 gatttaaaaa accccgtgaa ttaacttggg tcacaggcgt ggttttggct gtattgactg 1261 catcatttgg tgtaactggt tattctttgc cttgggatca aattggttat tgggcagtca 1321 aaattgttac aggtgtaccc gaagctattc cggtaatagg gtccccttta gtggaattat 1381 tacgtggaag tgctagtgtg ggccaatcca ctttgactcg tttttatagt ttacatacct 1441 ttgtactacc tctgcttact gccgtattta tgttaatgca ctttccaatg atacgtaagc 1501 aaggtatttc gggtccgtta tagggaaggc atagcataga gaattctaat tctcatatat 1561 catatcgggt aggttgtggt atttcattgc tacaaacatg ggttattgta aaataagaca 1621 tgtcatttgg atacttctct tcaacttcga agtattttta tacaaatagt tgaagtgaat 1681 tttacgaaag aaaataaggc ggattatggg agtgtgtgac ttgnnnnnnn nnnnnnnnnn 1741 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1801 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1861 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1921 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1981 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2041 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2101 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2161 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2221 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2281 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2341 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2401 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnaccta tcccaataac 2461 aaagaaacct gacttaaatg atcctgtatt aagagcaaaa ttagctaaag ggatgggaca 2521 taattattat ggggaacccg cgtggcccaa cgatctttta tacatttttc cagtagtaat 2581 tctaggtact attgcgtgta atgtaggttt agcggttcta gagccgtcaa tgattggtga 2641 accggcggat ccgtttgcaa ctcctttgga aatattaccc gagtggtact tctttcccgt 2701 atttcaaata ctccgtacag tacccaataa gttattgggc gttctcttaa tggtttctgt 2761 gccaacgggc ttattgacag taccctttct agagaatgtc aataaattcc aaaatccatt 2821 tcgtcgccca gtagctacga ccgttttttt aatcggtact gcagtagctc tttggttagg 2881 tattggagca acattaccca ttgataaatc cttaacttta ggtctttttt agtttaggga 2941 tttttcgagt tgattcattc caccgcgaag tcccctgcat gggtatctag gaaatag //