LOCUS OR026185 5475 bp DNA linear VRL 13-AUG-2023 DEFINITION Zophobas morio black wasting virus strain Oregon-molitor, complete genome. ACCESSION OR026185 VERSION OR026185.1 KEYWORDS . SOURCE Zophobas morio black wasting virus ORGANISM Zophobas morio black wasting virus Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Densovirinae. REFERENCE 1 (bases 1 to 5475) AUTHORS Penzes,J.J., Holm,M., Firlar,E. and Kaelber,J.T. TITLE Sequencing-free discovery by cryo-EM of a pathogenic parvovirus causing mass mortality of farmed beetles JOURNAL Unpublished REFERENCE 2 (bases 1 to 5475) AUTHORS Penzes,J.J. and Kaelber,J.T. TITLE Direct Submission JOURNAL Submitted (15-MAY-2023) Institute for Quantitative Biomedicine, Rutgers University, 174 Frelinghuysen Rd, Piscataway, NJ 08854, USA COMMENT ##Assembly-Data-START## Assembly Method :: Flye v. 2.9.2 Assembly Name :: Oregon-molitor Coverage :: 466x Sequencing Technology :: Oxford Nanopore Technologies ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..5475 /organism="Zophobas morio black wasting virus" /mol_type="genomic DNA" /strain="Oregon-molitor" /isolation_source="whole larva" /host="Tenebrio molitor" /db_xref="taxon:3067671" /geo_loc_name="USA" /collection_date="Nov-2022" gene 482..994 /gene="NS3" CDS 482..994 /gene="NS3" /codon_start=1 /product="nonstructural protein 3" /protein_id="WLG20735.1" /translation="MERGWEALKPFGPTAFVYLMRLPDEVPPFAHERNHIIWDFYLWY EQGREKKICEPCYSGKSRFYRPGSANEWLEKGWVFKRVENHSMIDGDRLLEDLIWDED NWCSLCIVEPLWIHILDDDDCLFDYDYHLKRRRTWSDSSSEDSDIDYCKHTVMQGIRI NPTLYKFINE" gene 1028..2629 /gene="NS1" CDS 1028..2629 /gene="NS1" /codon_start=1 /product="nonstructural protein 1" /protein_id="WLG20733.1" /translation="MNNDDHFWEYFDSTLGDASGRVGESSGSMVEDYGYDTTGPTMQE CDVTANRALEQELQTMVDRFVTRLEKEDWQDSGYYVSDVFACESIGRAQGLAKRMAER AGNFRRGLILISIHSDQDSSAHVHTIHSCAYANRSCRCYFKAFPEAQEDARRLLRKPP PIETFKRSDWENITKYFCTKGRRATFAKINGAIQRLPLEITNLSDIILSGQVEGGSHS GLENCHDPLDNNDERKRGIEPKGDGGTRSRKRRGVGNAGGDGGIRGDTGVILDLIKRY AVCPLSEIVYTREYLENPIAVKRLDDRDVKNAIDCHAAIINTWNRQDYVKFYEDPNTV KIWSARNVDSVELYYLTDNESRDIINKLLDYQCGLAKKQFVTDLINVTDMNIPKCNCF LIVSPPSAGKNFLCDAIKDYYINVGQMQNPNKYNTFAYQDCHNRRLLIWNEPNYEPRE TENLKMLFGGDNLSANVKCKPQANVKRTPVICMSNVVPRFANHEAFADRVITYYWNAA PFLKEVIKKPRPDSVMNLLYEIYNS" gene 1035..1832 /gene="NS2" CDS 1035..1832 /gene="NS2" /codon_start=1 /product="nonstructural protein 2" /protein_id="WLG20734.1" /translation="MTTTFGNILTVLWEMLPDEWANHPGVWWKIMDTIPLDQQCKNAM LQLIGRWSKNYKQWSTGSLPALKKKIGKTADTMCQMSLPANQLDELRDWLSEWLNERE ISDEDLSLYLSTAIRIAVPMSTPSTAAPTQTGRAGATSKRSPKRKRTLDDFFESLHPS KRSSEAIGKISQSIFVRKGDEQRSLKSTVPYKDFLLKLQIYPTLSYQAKLKEDHTQAW RTATTRLTITMNENEELNRKVMEVLEVAKEEVLATQEEMEESEGTQE" gene complement(2630..4411) /gene="cap2" CDS complement(2630..4411) /gene="cap2" /note="expresses VP2, VP3 and VP4 by leaky scanning" /codon_start=1 /product="structural protein 2" /protein_id="WLG20737.1" /translation="MPRVRPLGPNPQDRPNWDSMNEGQRRYAMEQWNLARVRRGEYFD PPGDDDLPLTQADAIDNFDLDLLGSPQEAEQPSQQSEDGVDDFLQQVRDRQDLRDAGP SNAPQPNMADIEMSQVSSSSGGSKRGSGGGGPPSKVSKSGTSLPGTGGNLDGMVRGGS GEGGATAILRPIGLHVEKFQQTYRKKWRFLTSANANVILAEAASGERPARWALTTGMA SIPWEYLFFYMSPAEYNRMKNYPGTFAKSASVRIRTWNTRVAFQTGDTQTANATLNQN KFLQVAKGIRSIPFICSTNRKYTYSDTEPMQPTGFATLTSYQYRDGLKTAMYGYDNDN KDFAKKPPADATGAEIYLQDYLTIYTNDARATTGTKILAGFPPYKNFIEEFDASACIN TDVVAMDYDFSYAPLVPQFAPVPNNLITQNYNGSYPAGTKNEVTAAKTTDSSQATAPT QVRNAPRKYIQGPHADTTFFDEEQNYLRVPIEQGGIFEEVNVETVHDTQMPSINVGIR AVPKLTTIDETTQANSWLDAQGYFEVDCVLTTESVDPYTYIKGGCYSANTKSQLQYFA SDGRPIAKVYDNPNVYGRMQMIKTVKP" gene complement(4351..5262) /gene="cap1" CDS complement(4351..5262) /gene="cap1" /note="spliced to cap2 to create VP1" /codon_start=1 /product="structural protein 1" /protein_id="WLG20736.1" /translation="MRRLFPVSMSEYIELSTITPSSSEESVFNQPSTSTGVRRRGGYV SIPINSSNSSISSAGSDSKLRVPNTPRVGGAVIGAGSQYQPIFEGQLGRAAADPRNPL SRAIFGNRDDYYAAVPWELRRLGLKERQEKIKPYGDPWNKDTKAKYPEHWRLVNPRRG LKKVKKQEQREAQARRDSANLARGEPPRNGLVLPYSNNIGPGNPIRPATNRADLIAQG HDLHYQQAKSDSDVLSADREAISQFAHEAIQGQDPISRIHAAVGGIGLGVKHAVEHLS GKVYYGKQCLELDRWVRILRIVLIGIV" BASE COUNT 1515 a 1115 c 1201 g 1644 t ORIGIN 1 actgcgacga cgagcagatc tatttatacc caatggtgac cttggaaacc agggtatacc 61 agtaaattgt atatttacat ggtataccat ggtttccaag gtcaccattg ggtataaata 121 gatctgctcg tcgtcgcagt cgtcagtgat aagccagggg cttatgggca agcaccaagt 181 aagggagata aagtgaagtg tataaatagt gtttaacatg taagtacctc attctgttgt 241 tgtatttcgt gcagtgcagt aatactttgg tttggtaagt aggtttaaac ataagaagat 301 atatcaccct cagagcttgt atgacattac taagaagaag gtaagagagg tgtacaagaa 361 taattggaac gagacgaagg tgctaccgaa gactatccag agggaactac tactagattg 421 gttaagatgt gacgagaaga tttctgagag tgatgacgat gtggaacgaa tagtggcacg 481 tatggaaagg ggatgggagg cattgaagcc ctttggtccg accgcatttg tgtacttgat 541 gagattacca gatgaagtac cgccatttgc acatgaaagg aatcatatca tttgggactt 601 ttatttgtgg tatgaacaag ggcgagaaaa gaaaatttgt gaaccgtgtt attccgggaa 661 gagtcgtttc taccgtccag gatctgctaa tgaatggttg gaaaaaggat gggtatttaa 721 acgcgtagag aatcactcca tgattgatgg ggacagattg ttagaggatt tgatatggga 781 tgaagacaac tggtgcagtt tgtgtattgt tgagccatta tggatccata tacttgatga 841 tgatgattgt ttgtttgatt atgactatca tttgaagaga agacgtacat ggagtgactc 901 aagctctgag gacagtgata ttgattattg taaacatact gttatgcaag ggattcgtat 961 aaaccccact ttgtataaat ttattaatga ataaagcaag tgttatagaa ttgttgtttc 1021 attacagatg aataatgacg accacttttg ggaatatttt gacagtactc tgggagatgc 1081 ttccggacga gtgggcgaat catccgggag tatggtggaa gattatggat acgataccac 1141 tggaccaaca atgcaagaat gcgatgttac agctaatagg gcgttggagc aagaattaca 1201 aacaatggtc gaccggttcg ttacccgcct tgaaaaagaa gattggcaag acagcggata 1261 ctatgtgtca gatgtctttg cctgcgaatc aattggacga gctcagggat tggctaagcg 1321 aatggctgaa cgagcgggaa atttccgacg aggacttatc cttatatcta tccacagcga 1381 tcaggatagc agtgcccatg tccacaccat ccacagctgc gcctacgcaa acaggtcgtg 1441 caggtgctac ttcaaagcgt tccccgaagc gcaagaggac gctagacgac ttcttcgaaa 1501 gcctccaccc atcgaaacgt tcaagcgaag cgattgggaa aatatcacaa agtatttttg 1561 tacgaaaggg agacgagcaa cgttcgctaa aatcaacggt gccatacaaa gacttcctct 1621 tgaaattaca aatctatccg acattatcct atcaggccaa gttgaaggag gatcacactc 1681 aggcctggag aactgccacg acccgcttga caataacgat gaacgaaaac gaggaattga 1741 accgaaaggt gatggaggta ctcgaagtcg caaaagaaga ggtgttggca acgcaggagg 1801 agatggagga atcagagggg acacaggagt aattcttgat ttaattaaga ggtatgctgt 1861 ttgtccatta tctgagatag tatatactcg cgagtacttg gaaaatccca ttgcagttaa 1921 aagattagat gatagggatg taaagaacgc tatagattgc catgctgcta ttattaatac 1981 ttggaataga caggattatg ttaagtttta tgaggaccca aacactgtta aaatttggag 2041 tgcacgtaat gttgactcgg tagagttata ttatttaact gataatgaat ctagagatat 2101 tattaataaa ctgcttgatt atcaatgtgg gttagctaag aaacagtttg taacggattt 2161 gattaatgta acagacatga atattcccaa gtgtaattgc tttctaattg ttagccctcc 2221 aagtgctggc aagaactttc tatgcgatgc tattaaagat tactatatta atgttggaca 2281 aatgcagaac cctaataaat ataatacttt cgcgtatcag gattgtcaca atagacgact 2341 tcttatttgg aatgaaccaa actacgaacc tagggaaacg gagaatttga agatgttatt 2401 tggaggggat aacttgtctg ctaatgttaa gtgtaaacct caagctaatg taaagcgtac 2461 tccagtaata tgtatgagta atgttgtacc cagatttgct aatcatgaag catttgctga 2521 cagagttatt acatattatt ggaatgctgc tcctttctta aaagaggtaa taaaaaagcc 2581 acgtcctgat tctgtaatga atttattata tgaaatatac aattcataat tatggtttta 2641 cagttttaat catttgcatc ctgccatata cattaggatt atcatatact ttagcaatag 2701 gacgaccatc acttgcaaaa tattgaagtt gagatttggt attggccgag taacatccgc 2761 ccttaatgta tgtgtaaggg tcgacactct ctgttgttag tacacaatca acttcgaagt 2821 agccttgtgc gtctagccag gaattagctt gagtagtttc atcaatggta gttaacttgg 2881 gaacagctct tatgccaaca tttatagatg gcatttgagt atcatgtact gtctcaacat 2941 ttacctcctc gaatatacca ccttgttcaa tagggactcg aagatagttc tgttcctcat 3001 caaagaatgt tgtatctgcg tggggaccct gtatatattt gcgaggtgca ttacgtactt 3061 gtgttggtgc tgtagcttgt gaggaatcgg ttgttttcgc tgccgtcact tcattcttcg 3121 ttcccgcagg ataactacca ttataatttt gagtaatcaa gttgtttggt actggtgcaa 3181 actgcggtac cagaggtgcg tagctaaaat cgtaatccat agcaactaca tctgtgttga 3241 tacatgcact tgcatcgaat tcttctataa agtttttgta tggtggaaac cccgccaata 3301 tcttagtacc agtagtagcc cttgcatcat tagtgtaaat ggttaaatag tcctgtagat 3361 atatctctgc gccagttgca tctgctggtg gtttcttagc aaagtcttta ttatcgttat 3421 cgtaaccata catagcagtc ttgagaccat ctcgatattg gtaggatgtc aatgttgcga 3481 atcccgtagg ttgcatgggt tcagtatcag aatatgtata ctttctgttt gtagaacata 3541 taaaaggaat acttctaata cccttagcaa cttgcagaaa tttgttttga ttcagtgtag 3601 cattagccgt ttgagtatct ccagtttgaa atgcaactct agtattccat gttctaatac 3661 gtactgaagc cgacttagca aacgtaccag gatagttctt cattcgatta tattctgctg 3721 gactcatata aaagaataag tattcccatg gaattgatgc cattcctgtc gttagcgccc 3781 atcttgctgg tctttctccg ctggccgctt cagccaatat gacgtttgca tttgctgaag 3841 tcagaaacct ccatttcttt ctataagttt gttgaaactt ctcaacatga agtccaattg 3901 gacgtaatat agctgtagct ccgccttccc cactacctcc tctaaccatg ccatccaaat 3961 tgcctccagt tccagggaga ctcgtccctg acttggatac cttactcggc ggtccgccac 4021 caccactgcc tcgcttcgat ccaccgctag aacttgatac ttgagacatt tctatgtctg 4081 ccatgtttgg ttgtggtgcg ttacttggtc cggcgtctct taaatcttgt ctatctctta 4141 cttgttgtaa aaaatcgtct actccgtctt ctgattgctg actgggttgt tccgcctcct 4201 ggggtgaccc taaaagatcc aaatcaaagt tatcaatcgc atcagcctga gttaaaggta 4261 ggtcgtcatc cccaggagga tcaaagtatt ccccacgtct tactctagct aggttccatt 4321 gttccatagc ataacgtctt tgtccctcat tcatactatc ccaattagga cgatcctgag 4381 gattcggacc caacggtcta actctaggca ttgcttaccg tagtatactt ttccacttaa 4441 atgttcgact gcgtgcttaa ctcccagccc gattcctccc actgccgcgt gtatcctaga 4501 tataggatcc tgaccctgga ttgcctcgtg tgcgaattgt gagattgctt ctctatccgc 4561 tgacagcacg tcgctatcgc tcttagcttg ttgataatgt aagtcgtgac cctgcgcaat 4621 aaggtcagct ctgttggtcg cgggacgtat tggatttcca ggtccgatat tgttcgaata 4681 cggtaaaact agtccgttcc gtggtggttc tccccttgct agattggcag aatctcttct 4741 cgcctgtgct tccctttgtt cttgcttttt caccttcttt agtcccctgc gaggatttac 4801 tagtctccag tgttctggat atttagcctt agtgtcctta ttccaaggat ctccgtacgg 4861 tttgatcttc tcctgtcgct ctttcaaccc caaacgtctc aattcccaag gaacggctgc 4921 gtagtaatcg tcccgattac caaatatcgc tctcgataaa gggttcctag ggtcagctgc 4981 tgctcttccc aattgccctt cgaatattgg ttgatattgg ctacctgctc caataaccgc 5041 acccccaaca cgtggtgtat taggtactct caatttactg tcacttccgg cactggagat 5101 actactatta gacgagttaa taggaataga tacgtatcca cccctacgtc gcacccctgt 5161 acttgtactg ggttgattaa acacactctc ttcactactg ctgggggtaa tagtgctcag 5221 ctcgatgtac tcggacatac tgactggaaa taacctgcgc atacatattt atatccatgt 5281 tgatccccct tacttggtgc ttgcccataa gcccctggct tatcactgac gactgcgacg 5341 acgagcagat ctatttatac ccaatggtga ccttggaaac catggtatac catgtaaata 5401 gtatatttac atggtaacca tggtttccaa ggtcaccatt gggtataaat agatctgctc 5461 gtcgtcgcag tcgtc //