LOCUS       MK338836                1027 bp    cRNA    linear   VRL 31-JAN-2020
DEFINITION  Influenza A virus (A/swine/Rotthalmuenster/5536/2006(H1N2)) segment
            7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete
            cds.
ACCESSION   MK338836
VERSION     MK338836.1
KEYWORDS    .
SOURCE      Influenza A virus
  ORGANISM  Influenza A virus
            Viruses; Riboviria; Orthornavirae; Negarnaviricota;
            Polyploviricotina; Insthoviricetes; Articulavirales;
            Orthomyxoviridae; Alphainfluenzavirus; Alphainfluenzavirus
            influenzae.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Duerrwald,R., Groth,M., Krumbholz,A., Lange,J., Philipps,A. and
            Zell,R.
  TITLE     A 13-year long-term swine influenza surveillance in Germany
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1027)
  AUTHORS   Zell,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-DEC-2018) Division of Experimental Virology, Jena
            University Hospital, Hans-Knoell-Str. 2, Jena D-07745, Germany
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Influenza A virus"
                     /mol_type="viral cRNA"
                     /strain="A/swine/Rotthalmuenster/5536/2006"
                     /serotype="H1N2"
                     /isolate="5536"
                     /host="swine"
                     /db_xref="taxon:11320"
                     /segment="7"
                     /geo_loc_name="Germany: Rotthalmuenster"
                     /collection_date="06-Sep-2006"
     gene            26..1007
                     /gene="M2"
     CDS             join(26..51,740..1007)
                     /gene="M2"
                     /codon_start=1
                     /product="matrix protein 2"
                     /protein_id="AZQ96778.1"
                     /translation="MSLLTEVETPTRNGWECKYSGSSDAIATAANIIGILHLILWILD
                     RLFFKCIYRRLKYGLKRGPSTEGVPESMREEYQQEQQSAVDVDDGHFVNIELE"
     gene            26..784
                     /gene="M1"
     CDS             26..784
                     /gene="M1"
                     /codon_start=1
                     /product="matrix protein 1"
                     /protein_id="AZQ96777.1"
                     /translation="MSLLTEVETYVLSIIPSGPLKAEIAQRLEGVFAGKNTDLEALME
                     WLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFVQNALNGNGDPNNMDRAVKLYKK
                     LKREITFHGAKEVSLSYSTGALASCMGLIYNRMGTVTTEAAFGLVCATCEQIADSQHR
                     SHRQMATTTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVASQTRQMVHAMRT
                     IGTHPSSSAGLKDDLLENLQAYQKRMGVQIQRFK"
BASE COUNT          301 a          219 c          266 g          241 t
ORIGIN      
        1 agcaaaagca ggtagatatt taaagatgag tcttctaacc gaggtcgaaa cgtacgttct
       61 ttctattatc ccgtcgggcc ccctcaaagc cgagatcgcg cagagactgg aaggtgtttt
      121 tgcagggaag aacacagatc ttgaggctct catggagtgg ctaaagacaa gaccgatcct
      181 gtcacctctg actaagggaa ttctgggatt tgtgttcacg ctcaccgtgc ccagtgagcg
      241 aggactgcag cgtagacgct ttgttcaaaa tgccctaaac ggaaatgggg accctaataa
      301 catggataga gcagtcaaat tatacaagaa gctaaaaagg gaaataacgt tccatggggc
      361 caaggaagtg tcactaagct actcaactgg tgctcttgcc agttgcatgg gcctcatata
      421 caatagaatg ggaacagtga ccacagaagc tgcttttggc ctggtgtgtg ccacttgtga
      481 gcagatcgct gactcacagc atcggtcaca cagacaaatg gctactacca ccaatccatt
      541 aataaggcat gaaaacagga tggtactggc tagcactaca gctaaggcta tggaacagat
      601 ggctggatcg agtgaacagg cagcagaggc catggaggtt gccagtcaga ctaggcagat
      661 ggtgcatgca atgagaacaa ttgggacaca tcccagctcc agtgccggtc tgaaagatga
      721 ccttcttgaa aatttgcagg cctaccagaa acggatggga gtgcaaatac agcggttcaa
      781 gtgatgctat tgccactgca gcaaacatca tcggaatctt gcacctgata ttgtggattc
      841 ttgatcgtct ttttttcaaa tgtatttatc gtcgccttaa atacggtttg aaaagagggc
      901 cttctacgga aggagtgcct gagtccatga gggaagaata tcaacaggaa cagcagagtg
      961 ctgtggatgt tgacgatggt cattttgtca acatagagct ggagtaaaaa actaccttgt
     1021 ttctact
//