LOCUS MG806807 658 bp DNA linear VRT 19-JUL-2018
DEFINITION Siphateles boraxobius isolate SB316 cytochrome oxidase subunit I
(COI) gene, partial cds; mitochondrial.
ACCESSION MG806807
VERSION MG806807.1
KEYWORDS .
SOURCE mitochondrion Siphateles boraxobius (Borax Lake chub)
ORGANISM Siphateles boraxobius
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Leuciscidae; Laviniinae; Siphateles.
REFERENCE 1 (bases 1 to 658)
AUTHORS Schonhuth,S., Vukic,J., Sanda,R., Yang,L. and Mayden,R.L.
TITLE Phylogenetic relationships and classification of the Holarctic
family Leuciscidae (Cypriniformes: Cyprinoidei)
JOURNAL Mol. Phylogenet. Evol. (2018) In press
PUBMED 29913311
REMARK Publication Status: Available-Online prior to print
REFERENCE 2 (bases 1 to 658)
AUTHORS Schonhuth,S.I.
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2018) Biology, Saint Louis University, 3507
Laclede Ave., Saint Louis, MO 63103, USA
COMMENT ##Assembly-Data-START##
Assembly Method :: Seaview v. 4.3.0.
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..658
/organism="Siphateles boraxobius"
/organelle="mitochondrion"
/mol_type="genomic DNA"
/isolate="SB316"
/db_xref="taxon:180520"
/geo_loc_name="USA: Oregon"
gene <1..>658
/gene="COI"
CDS <1..>658
/gene="COI"
/codon_start=2
/transl_table=2
/product="cytochrome oxidase subunit I"
/protein_id="AVP80076.1"
/translation="TLYLVFGAWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTA
HAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGV
EAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAVNFITTIINMKPPAI
SQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL
F"
BASE COUNT 159 a 180 c 125 g 194 t
ORIGIN
1 taccctctat cttgtatttg gtgcctgagc aggaatggtg ggaaccgctt taagcctcct
61 tattcgggct gaattaagcc aacccggatc actcctaggt gatgaccaaa tttataatgt
121 tattgttacc gcccatgcct tcgtaataat tttctttata gtaatgccaa ttcttatcgg
181 ggggttcggg aattgactcg tccccctaat gattggtgca cctgacatag cattcccgcg
241 cataaataat ataagcttct gacttcttcc tccatcgttc ctcctattgc tagcctcttc
301 tggtgttgag gccggagctg ggacagggtg aacagtatac cccccactcg caggcaactt
361 ggcccacgcg ggggcatcag ttgatctaac aatcttctca ctgcacctag caggtgtttc
421 atcaatctta ggggcagtaa actttattac cacaattatt aacataaaac ccccagctat
481 ctcccaatat caaacacccc tcttcgtttg agccgtactt gtgacagccg ttcttcttct
541 cttatcacta ccagttctag ccgccggaat tacaatgctt cttacagatc gaaatcttaa
601 caccaccttc tttgacccgg caggaggagg agatccaatc ttatatcaac acctgttc
//