LOCUS HUMOCLHMB 1643 bp mRNA linear HUM 29-MAR-2010 DEFINITION Homo sapiens oculorhombin (PAX6) mRNA, complete cds, alternatively spliced. ACCESSION M77844 VERSION M77844.1 KEYWORDS DNA-binding protein; homeobox protein; iris hypoplasia; oculorhombin; paired box; retinal abnormalities; transcription factor. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1643) AUTHORS Ton,C.C.T., Hirvonen,H., Miwa,H., Well,M.M., Monaghan,P., Jordan,T., van Heyningen,V., Hastle,N.D., Meijers-Heijboer,H., Drechsler,M., Royer-Pokora,B., Collins,F.S., Swaroop,A., Strong,L.C. and Saunders,G.F. TITLE Positional cloning and characterization of a paired box- and homeobox-containing gene from the aniridia region JOURNAL Cell 67 (6), 1059-1074 (1991) PUBMED 1684738 FEATURES Location/Qualifiers source 1..1643 /db_xref="H-InvDB:HIT000196418" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /map="11 p13" /tissue_type="eye" /dev_stage="fetal" gene 1..1643 /gene="PAX6" /gene_synonym="aniridia" CDS 363..1631 /gene="PAX6" /gene_synonym="aniridia" /codon_start=1 /product="oculorhombin" /protein_id="AAA59962.1" /translation="MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISR ILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEI RDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRP GWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFT QEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR QASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSMLGLTDTALTNTYSALPPMPS FTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTT STGLISPGVSVPVQVPGSEPDMSQYWPRLQ" misc_feature 435..686 /gene="PAX6" /gene_synonym="aniridia" /note="Region: paired box" misc_feature 1017..1166 /gene="PAX6" /gene_synonym="aniridia" /note="Region: homeobox" BASE COUNT 487 a 444 c 388 g 324 t ORIGIN 1 tatcgataag tttttttttt attgtcaatc tctgtctcct tcccaggaat ctgaggattg 61 ctcttacaca ccaacccagc aacatccgtg gagaaaactc tcaccagcaa ctcctttaaa 121 acaccgtcat ttcaaaccat tgtggtcttc aagcaacaac agcagcacaa aaaaccccaa 181 ccaaacaaaa ctcttgacag aagctgtgac aaccagaaag gatgcctcat aaagggggaa 241 gactttaact aggggcgcgc agatgtgtga ggccttttat tgtgagagtg gacagacatc 301 cgagatttca gagccccata ttcgagcccc gtggaatccc gcggccccca gccagagcca 361 gcatgcagaa cagtcacagc ggagtgaatc agctcggtgg tgtctttgtc aacgggcggc 421 cactgccgga ctccacccgg cagaagattg tagagctagc tcacagcggg gcccggccgt 481 gcgacatttc ccgaattctg caggtgtcca acggatgtgt gagtaaaatt ctgggcaggt 541 attacgagac tggctccatc agacccaggg caatcggtgg tagtaaaccg agagtagcga 601 ctccagaagt tgtaagcaaa atagcccagt ataagcggga gtgcccgtcc atctttgctt 661 gggaaatccg agacagatta ctgtccgagg gggtctgtac caacgataac ataccaagcg 721 tgtcatcaat aaacagagtt cttcgcaacc tggctagcga aaagcaacag atgggcgcag 781 acggcatgta tgataaacta aggatgttga acgggcagac cggaagctgg ggcacccgcc 841 ctggttggta tccggggact tcggtgccag ggcaacctac gcaagatggc tgccagcaac 901 aggaaggagg gggagagaat accaactcca tcagttccaa cggagaagat tcagatgagg 961 ctcaaatgcg acttcagctg aagcggaagc tgcaaagaaa tagaacatcc tttacccaag 1021 agcaaattga ggccctggag aaagagtttg agagaaccca ttatccagat gtgtttgccc 1081 gagaaagact agcagccaaa atagatctac ctgaagcaag aatacaggta tggttttcta 1141 atcgaagggc caaatggaga agagaagaaa aactgaggaa tcagagaaga caggccagca 1201 acacacctag tcatattcct atcagcagta gtttcagcac cagtgtctac caaccaattc 1261 cacaacccac cacaccggtt tcctccttca catctggctc catgttgggc ctaacagaca 1321 cagccctcac aaacacctac agcgctctgc cgcctatgcc cagcttcacc atggcaaata 1381 acctgcctat gcaaccccca gtccccagcc agacctcctc atactcctgc atgctgccca 1441 ccagcccttc ggtgaatggg cggagttatg atacctacac ccccccacat atgcagacac 1501 acatgaacag tcagccaatg ggcacctcgg gcaccacttc aacaggactc atttcccctg 1561 gtgtgtcagt tccagttcaa gttcccggaa gtgaacctga tatgtctcaa tactggccaa 1621 gattacagta aaaaaaaaaa aaa //