LOCUS AH001860 4826 bp DNA linear ROD 01-AUG-2016 DEFINITION Mus musculus strain DBA/2J acid beta-galactosidase (GLB-1) gene, complete cds. ACCESSION AH001860 M63242 M75107 M75108 M75109 M75111 M75112 M75113 M75114 M75115 M75116 M75117 M75118 M75119 M75120 M75121 M75122 M75137 VERSION AH001860.2 KEYWORDS acid beta-galactosidase. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 4826) AUTHORS Nanba,E. and Suzuki,K. TITLE Molecular cloning of mouse acid beta-galactosidase cDNA: sequence, expression of catalytic activity and comparison with the human enzyme JOURNAL Biochem. Biophys. Res. Commun. 173 (1), 141-148 (1990) PUBMED 2124109 REFERENCE 2 (bases 1 to 4826) AUTHORS Nanba,E. and Suzuki,K. TITLE Organization of the mouse acid beta-galactosidase gene JOURNAL Biochem. Biophys. Res. Commun. 178 (1), 158-164 (1991) PUBMED 1906271 COMMENT On or before Aug 1, 2016 this sequence version replaced M75137.1, M75107.1, M75108.1, M75109.1, M75111.1, M75112.1, M75113.1, M75114.1, M75115.1, M75116.1, M75117.1, M75118.1, M75119.1, M75120.1, M75121.1, M75122.1, AH001860.1. FEATURES Location/Qualifiers source 1..4826 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" /map="chromosome 9" source 837..1006 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 1134..1284 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 1412..1472 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 1600..1694 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 1822..2002 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 2130..2188 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 2316..2437 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 2564..2605 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 2733..2845 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 2973..3047 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 3175..3264 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 3392..3508 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 3636..3767 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 3895..4149 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" source 4277..4816 /organism="Mus musculus" /mol_type="genomic DNA" /strain="DBA/2J" /db_xref="taxon:10090" protein_bind 439..444 /bound_moiety="Sp-1" protein_bind 444..449 /bound_moiety="Sp-1" protein_bind 456..461 /bound_moiety="Sp-1" gene 469..4816 /gene="GLB-1" mRNA join(469..630,837..1006,1134..1284,1412..1472,1600..1694, 1822..2002,2130..2188,2316..2437,2565..2605,2733..2845, 2973..3047,3175..3264,3392..3508,3636..3767,3895..4149, 4277..4816) /gene="GLB-1" /product="acid beta-galactosidase" exon 469..630 /gene="GLB-1" /number=1 mRNA join(510..630,837..1006,1134..1284,1412..1472,1600..1694, 1822..2002,2130..2188,2316..2437,2565..2605,2733..2845, 2973..3047,3175..3264,3392..3508,3636..3767,3895..4149, 4277..4816) /gene="GLB-1" /product="acid beta-galactosidase" exon 510..630 /gene="GLB-1" /number=1 CDS join(553..630,837..1006,1134..1284,1412..1472,1600..1694, 1822..2002,2130..2188,2316..2437,2565..2605,2733..2845, 2973..3047,3175..3264,3392..3508,3636..3767,3895..4149, 4277..4480) /gene="GLB-1" /codon_start=1 /product="acid beta-galactosidase" /protein_id="AAA37292.1" /translation="MLRVPLCTPLPLLALLQLLGAAHGIYNVTQRTFKLDYSRDRFLK DGQPFRYISGSIHYFRIPRFYWEDRLLKMKMAGLNAIQMYVPWNFHEPQPGQYEFSGD RDVEHFIQLAHELGLLVILRPGPYICAEWDMGGLPAWLLEKQSIVLRSSDPDYLVAVD KWLAVLLPKMKPLLYQNGGPIITVQVENEYGSYFACDYDYLRFLVHRFRYHLGNDVIL FTTDGASEKMLKCGTLQDLYATVDFGTGNNITQAFLVQRKFEPKGPLINSEFYTGWLD HWGKPHSTVKTKTLATSLYNLLARGANVNLYMFIGGTNFAYWNGANTPYEPQPTSYDY DAPLSEAGDLTKKYFALREVIQMFKEVPEGPIPPSTPKFAYGKVALRKFKTVAEALGI LCPNGPVKSLYPLTFTQVKQYFGYVLYRTTLPQDCSNPKPIFSSPFNGVRDRAYVSVD GVPQGILDRNLMTALNIRGKAGATLDILVENMGRVNYGRFINDFKGLISNMTINSTVL TNWTVFPLDTEAMVRNHLWGREASDEGHLDRRSTSNSSDLILPTFYVGNFSIPSGIPD LPQDTFIQFPGWSKGQVWINGFNLGRYWPTMGPQKTLFVPRNILTTSAPNNITVLELE FAPCSEGTPELCTVEFVDTPVIS" intron order(631..721,822..836) /gene="GLB-1" /note="22 kb gap" /number=1 gap 722..821 /estimated_length=unknown exon 837..1006 /gene="GLB-1" /number=2 intron order(1007..1018,1119..1133) /gene="GLB-1" /note="3.4 kb gap" /number=2 gap 1019..1118 /estimated_length=unknown exon 1134..1284 /gene="GLB-1" /number=3 intron order(1285..1296,1397..1411) /gene="GLB-1" /note="1.9 kb gap" /number=3 gap 1297..1396 /estimated_length=unknown exon 1412..1472 /gene="GLB-1" /number=4 intron order(1473..1484,1585..1599) /gene="GLB-1" /note="2.3 kb gap" /number=4 gap 1485..1584 /estimated_length=unknown exon 1600..1694 /gene="GLB-1" /number=5 variation 1601 /gene="GLB-1" /note="t in DBA/2J strain; c in C57/black/J6 strain" intron order(1695..1706,1807..1821) /gene="GLB-1" /note="6.5 kb gap" /number=5 gap 1707..1806 /estimated_length=unknown exon 1822..2002 /gene="GLB-1" /number=6 intron order(2003..2014,2115..2129) /gene="GLB-1" /note="3.8 kb gap" /number=6 gap 2015..2114 /estimated_length=unknown exon 2130..2188 /gene="GLB-1" /number=7 intron order(2189..2200,2301..2315) /gene="GLB-1" /note="3.2 kb gap" /number=7 gap 2201..2300 /estimated_length=unknown exon 2316..2437 /gene="GLB-1" /number=8 variation 2324 /gene="GLB-1" /note="c in DBA/2J strain; t in C57/black/J6 strain" intron order(2438..2449,2550..2564) /gene="GLB-1" /note="0.08 kb gap" /number=8 gap 2450..2549 /estimated_length=unknown exon 2565..2605 /gene="GLB-1" /number=9 intron order(2606..2617,2718..2732) /gene="GLB-1" /note="5.1 kb gap" /number=9 gap 2618..2717 /estimated_length=unknown exon 2733..2845 /gene="GLB-1" /number=10 intron order(2846..2857,2958..2972) /gene="GLB-1" /note="7.7 kb gap" /number=10 gap 2858..2957 /estimated_length=unknown exon 2973..3047 /gene="GLB-1" /number=11 intron order(3048..3059,3160..3174) /gene="GLB-1" /note="3.6 kb gap" /number=11 gap 3060..3159 /estimated_length=unknown exon 3175..3264 /gene="GLB-1" /number=12 intron order(3265..3276,3377..3391) /gene="GLB-1" /note="2.2 kb gap" /number=12 gap 3277..3376 /estimated_length=unknown exon 3392..3508 /gene="GLB-1" /number=13 variation 3475 /gene="GLB-1" /note="c in DBA/2J strain; t in C57/black/J6 strain" intron order(3509..3520,3621..3635) /gene="GLB-1" /note="3.0 kb gap" /number=13 gap 3521..3620 /estimated_length=unknown exon 3636..3767 /gene="GLB-1" /number=14 intron order(3768..3779,3880..3894) /gene="GLB-1" /note="4.8 kb gap" /number=14 gap 3780..3879 /estimated_length=unknown exon 3895..4149 /gene="GLB-1" /number=15 variation 3958 /gene="GLB-1" /note="g in DBA/2J strain; a in C57/black/J6 strain (Asp->Asn)" variation 4024 /gene="GLB-1" /note="a in DBA/2J strain; g in C57/black/J6 strain (Arg->Gly)" intron order(4150..4161,4262..4276) /gene="GLB-1" /note="9.1 kb gap" /number=15 gap 4162..4261 /estimated_length=unknown exon 4277..4816 /gene="GLB-1" /number=16 regulatory 4797..4802 /regulatory_class="polyA_signal_sequence" /gene="GLB-1" polyA_site 4816 /gene="GLB-1" BASE COUNT 728 a 915 c 859 g 824 t ORIGIN 1 gaattcctct gtaacctact acagtgcttc ttcacctttg ctttcactga acctcggagc 61 tgggtccggg tctaggactt cagggtttct gggctggggc ccagagtctg catttccatg 121 tttaagtctc gttggcctgt ggaccacacc ttgtgaatgt tagaccacgt gctagggaga 181 gttttagggg ctaggcttct aaggccagag cactgaggac tgactggctg gtttcctctt 241 ccctgctcag ttcttttctg gcagccggga caggctgaag gccctgtgaa tggccagccc 301 ctgaacttca tcattgctca ttcaggggtg ccgccattcc ggaaggaaac acagttgtgg 361 gagatgcata gaccacagct gcttctgagt cacgtggcct acagaggctg gacctccact 421 cgcagcacag agcctcgggg cggggcggag ctgggggcgg gtcctggcat agggtcctca 481 acaacccccg gaggtgcagc ggctggccag agcgcccact gcctaacgga gagaccccat 541 cgtggcgcga tcatgctccg ggtccccctg tgtacgccgc tcccgctcct ggcactgctg 601 caactgctgg gcgctgcgca cggcatctat gtaagtctcc ggtgccaccg cgcggggacg 661 ctccgccgct gggaagcggg cagaggccga ggaaagccgc ggctctgcaa agtcgggatc 721 cnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 781 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nggacttgcc ctgcagaatg 841 tcacccagag gacatttaag ctcgactaca gccgggaccg cttcctcaag gatggacagc 901 cattccgata catctcggga agcattcatt acttccggat accccgcttc tactgggagg 961 accggctgct gaagatgaag atggctgggc tgaatgctat ccagatgtaa ggaaggatnn 1021 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1081 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnntg tgtgtcttca caggtacgtg 1141 ccctggaact tccatgaacc ccaaccagga caatatgagt tttctgggga ccgtgatgtg 1201 gagcatttca tccagctggc tcatgagctg ggactcctgg tgatcctgag gcctgggccc 1261 tacatctgtg cagagtggga catggtgagc ttccagnnnn nnnnnnnnnn nnnnnnnnnn 1321 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1381 nnnnnnnnnn nnnnnntttt ctctctcaaa ggggggctta cctgcttggc tactagagaa 1441 acaatctatc gttctccggt cttctgaccc aggtgagtta ccgtnnnnnn nnnnnnnnnn 1501 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1561 nnnnnnnnnn nnnnnnnnnn nnnncatcct gttttgcaga ttaccttgta gctgtggata 1621 aatggctggc agtccttctg cccaagatga agcccctgct ctaccagaac ggaggaccga 1681 tcataaccgt gcaggtaccc ggggatnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1741 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1801 nnnnnntttc taaacacaca ggttgagaat gagtacgggt cctactttgc ctgcgattac 1861 gactacctac gcttcctggt gcaccgcttc cgctaccatc tgggtaatga cgtcattctc 1921 ttcaccaccg acggagcaag tgaaaaaatg ctgaagtgtg ggaccctgca ggacctgtac 1981 gccacagtgg attttggaac aggtcggtgt gtgtnnnnnn nnnnnnnnnn nnnnnnnnnn 2041 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2101 nnnnnnnnnn nnnntcttga aatttccagg caacaatatc acacaagctt tcctggtcca 2161 gaggaagttt gaacctaaag gacctttggt aagaactggg nnnnnnnnnn nnnnnnnnnn 2221 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2281 nnnnnnnnnn nnnnnnnnnn ccttttccct ttcagatcaa ttccgagttc tatactggct 2341 ggctagacca ctggggtaaa ccccattcca cggtgaaaac taaaacactg gctacctccc 2401 tctataacct gcttgcccgt ggggccaacg tgaacttgtg agcacccagn nnnnnnnnnn 2461 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2521 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnc ttatttctct gtaggtacat gtttataggt 2581 gggaccaatt ttgcctattg gaatggtaag atccgttnnn nnnnnnnnnn nnnnnnnnnn 2641 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2701 nnnnnnnnnn nnnnnnnttt tctgtcttcc aggtgccaac acgccctatg agccacagcc 2761 caccagctat gactacgacg ccccactgag cgaggctggg gacctcacta agaagtattt 2821 tgctcttcga gaagtcattc agatggtggg tccttcgnnn nnnnnnnnnn nnnnnnnnnn 2881 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2941 nnnnnnnnnn nnnnnnncag tgtgttttat agtttaaaga agtcccagaa ggccctatcc 3001 ctccgtctac acccaaattt gcatatggaa aagttgctct gagaaaggta agacaggatn 3061 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3121 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnt ctgcttcttt gcagttcaag 3181 acagtggctg aagctctggg tatcctgtgt cccaatgggc cagtgaaaag cctctatccc 3241 ctgacattca ctcaggtaaa acaggtaggt ctgtctnnnn nnnnnnnnnn nnnnnnnnnn 3301 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3361 nnnnnnnnnn nnnnnnttct tttctcacca gtattttggg tatgtgctgt accgaacaac 3421 gcttcctcaa gattgcagta acccgaaacc cattttctct tcacccttca atggcgtccg 3481 tgatcgggct tacgtctctg tggacggggt aagcattctc nnnnnnnnnn nnnnnnnnnn 3541 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3601 nnnnnnnnnn nnnnnnnnnn ggctttaact cacaggtccc ccaaggaatc cttgatcgaa 3661 acctcatgac agctctgaac atacggggga aggctggagc cacgctggac atcctggtgg 3721 agaacatggg gcgtgtgaac tatggcagat tcatcaatga cttcaaggta ggacacttgn 3781 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3841 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnng tttccttttt ccagggtttg 3901 atttccaaca tgactatcaa ctccactgtc ctcaccaact ggacggtctt cccactggac 3961 actgaggcca tggtacgcaa ccatctctgg ggccgggagg ccagtgatga gggtcacctt 4021 gacagacggt cgacctccaa ttcttcggac ctcatactcc ccacctttta cgtgggcaac 4081 ttctccatcc cctcgggcat cccagacctg ccacaggaca ccttcatcca gtttcctggg 4141 tggtccaagg tatgcatctt cnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4201 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4261 ntctccctct ctctagggtc aagtatggat caatggcttt aacctcggcc gatactggcc 4321 cacaatgggc ccacaaaaga ccttgttcgt gccaaggaac atcctgacca cttcagcccc 4381 aaacaacatc acagtgttgg agctagagtt tgcaccctgc agcgagggga ccccagagct 4441 gtgtacagta gagtttgttg acactccggt catttcctga cctgacttga ccatcggtgg 4501 ccattttcca agccagtctg gtcaagactc atggctgaac ctctgagact gagccttggg 4561 gagcacagct ctactctggt tacacggatc acctttgttg tgctagaatg gaagctacat 4621 ttctggaatg tgtgtaccct gctggtgact ttgcagcccc gccttgcctg acctcccacc 4681 ctagtggcca ccgggaaggc tgaagggagt ggacaccaca ggaagacaca ggttggagca 4741 aaacttgaat aatgtccttt atcctgattt gaaataatca cgtcatcttt ctgctgaata 4801 aaattggttt gcaagttgtc cccctc //