LOCUS LJ660851 2233 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c69141.graph_c0_seq4.
ACCESSION LJ660851
VERSION LJ660851.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2233)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2233
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c69141.graph_c0_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 888 a 383 c 344 g 618 t
ORIGIN
1 aaatgtttac tgtagacata taattattta attggttttt gataagtatg gtgtggagat
61 tgcatctcta taaaatagct tgctctaatc ttagcacaat tactcacagt tcatgagatg
121 ctatatccgc acaatatatc tttcgccaaa tagttaataa acaaacaaat aaatagatag
181 ataagtaagc gtaaagaata tgtacacaaa catacgatac gtacatcgcc gaaaaatcat
241 ttttaatgtg ctattttaat tccaccagcg tgtcttcata gttaagtaaa taataacaaa
301 taaatgaata attagaaaca cgagagaaac atagaaaggg gattcgatga ttaccctttt
361 tctttcctgt tttcacccga acaaaatgta tgtatatagc gaagaaaagt atatagataa
421 acaattataa gagaatgata ctaatgataa acggggaaaa agcagtacgc atttgattat
481 cattaatata tatatataaa tatatgaata aactcccttc tcaccaaaga attactctct
541 aacaaagaga gcaacgcaga gcttcacaag cgtacctgaa tagtcgagta attagcaaca
601 aaggaataag ccattgacaa tcacaaaaga aaccgaaggg ccaaaggccg tttttctttt
661 tctaattcat tcataaatat atataaagaa aaaaaaaccc atagataagt atgtttaaac
721 taatgataca gcgaataagt tatatagaaa caaataatat aagaagtttt cctcctataa
781 aaataatgat aataataata atgggggaca tgtacgccac catatgaaaa aaaaaacgta
841 tctgtatact tgacctcgcc aaaacaatgt agaaactctg taagcgtctt aaatattgta
901 aagtaattaa ccacaaataa ataagtaacc aggaacacga aagaaaaaaa aggaagtgga
961 tttggtggtc gcctttttct ttcctgtttc tatataaaac atatatacct atctacacga
1021 gtaaataggt aaactaaatc gtaaagatcg ctaagataag cttaagaaca gcaaaaattt
1081 gttatgccta ataacgcgag caataagcac aattgttaag tacctatgaa taacgattaa
1141 acaattgtaa tattaactat cgcccagaac gcataacttc agcaaatttt tctctcgaaa
1201 ggtaatgatt ttttatacga gacaaaaaaa ataggtcttt tagcgagaat tattagtaag
1261 atgatggtta cgtaaatcac aataccttga tttaaataat cctttgatgg cacaatcact
1321 tcactgataa aaagtatata catatacata taatttgaac tagtagagac tttctccttc
1381 ttgcaacaaa aatcattcga gattttctaa tagggggatt tctttccatt gctgtcactc
1441 tcccttacat tccatgcgag gtaagaaacc tcgcaaatcc atacattaag caaaattagt
1501 tgaaccactt ttatccgcgt caaccagcca atcaatcccg cactcgtcac tcatatttaa
1561 cgaaaaagga aaactcgacg agatgcactg cgatgcccac gctggcaaac tgacgctaaa
1621 ctgcatcgaa aacggcatcc gtgggcctgc aaacacggag taagaccctt agggtagggg
1681 aagccacaga tgcttcgccc aggtaaagac cagaaggtgt gaaaaaacgg agagataaaa
1741 aagggatgta aggattagac agtaaaaccc cggaacatac acgtgttccg atattcgaac
1801 ttatagttca ataatatcat ttctgaagta agaggaagtc tcatattatt atattaatta
1861 accgaatgtc acatcagtaa ttgtgattta tcaaactatc aacgtataca tacatgtatt
1921 cttatacaca aaaaaatata tatatataca taatttatat acaaacatat ataaaacatt
1981 ataaaactat actaacggaa agaaagggta acacacgccc acactaaaca ataactatta
2041 aacttagaaa gcgtccaacg acgaatttta gataacttaa aattaagata actataagtt
2101 aattctgtat caaaacgaga gtttacattt ctttctcttt attttctgga tagtgatcga
2161 acttttaact gaatttaaag acccaccgta aaagaaaaac ggtagcgtga agaaaatgcg
2221 cataccgaca ggt
//