LOCUS LJ659490 1082 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68838.graph_c2_seq15.
ACCESSION LJ659490
VERSION LJ659490.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1082)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1082
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68838.graph_c2_seq15"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 374 a 144 c 119 g 445 t
ORIGIN
1 ggtatcaacg cagagtacat gtcagaaact gtcttcactg taaccagtgt taacagatgt
61 ttaaaacaga tgttaatata cttgtattac atattttctt acatttgaaa aagtgtctta
121 gtagtaatac tgtaagtatt ttgaccagta cttaattgtt aagaattact cttagccttt
181 aaatattata ttagcagagt aaagaggcaa gaaaagcctt gtacttttta tctttttatt
241 tgttgaataa aagaatctct gtaaaagagg aaaaaaataa tttgtactcg ttttaaatta
301 actaaattat tggttatttg cttaacatgc gcagctttgg catcaactac atgatatcta
361 cataaattta attgtatgta tgtacaaggt ctttctttat attattatta ttaacttcag
421 ggtgttaatg attcatattg aaacttgcca caccattgtg tcgtgcccta aataaaatct
481 ctattgtatt atatttttca ttgtcataca aatagtatta ataaatacat atgtttattt
541 taattatttc acattcttaa cacattttag ctgtttgcac agtttgcttg cacgctacac
601 acatacagaa ttgggaacgt taccttacaa aagtaacgcg ttactgttac tttgtaaaaa
661 ataactcgtt taccgttact cgttaccgat ttcataaagt aacgcgttac cgttaccgtt
721 acttaaaaaa ataacgattc gttatttttt tgttattttt tttgtaatgc taaaatatca
781 acttatttga ttttaaaatt atattattta ataattaata ttgtatgtaa taataaatat
841 taaaactttc aattctctaa acttatatac aattgtatag aacctaattt tttttatatt
901 tatgtaactt gtctaataat ttttcgaatt ttttatatca atatcttatt tactttttac
961 catttttata ctgcacaatt tttatagaaa attaaattaa acattatttt tagatttaaa
1021 cctcgtcata ttttaaatct cagaaataat tcaaaatttt ttcaataaca tatatatata
1081 ta
//