LOCUS LJ656677 1282 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68833.graph_c0_seq14.
ACCESSION LJ656677
VERSION LJ656677.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1282)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1282
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68833.graph_c0_seq14"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 382 a 192 c 210 g 498 t
ORIGIN
1 aatataattg tatttcttaa tttattttcc ttaattcttt tattatcatg ttttagtatt
61 aaatttgtta tatataagaa agcgcaaaat ataagtgtgt attttattcg agaattagtg
121 tatatgtatt tttattatta ttaatatcat ctgttttgtt aacttttttg ttaagagttc
181 ttgtgacagt taatttttta acagtttatc ctaatttttt atttttcaaa tttttatctg
241 ttatatgtat acacaaattt ggataatcat tggatacact ttcatgtatt taacgtatgt
301 tcttttatct acttttagaa aagtgttttt agggatacat ttttgctctt attatgtatt
361 tacttttctg tgtgtgtttt tgtgtgtatt tctatgatat gtaattatta tattaaatag
421 gtatcactta cttcaaattt aaatatgttt tgatatcaat ccaaaataca tgattggaaa
481 ttatactttt tagcatgcgc catacaaagc ctcctataat ttgagaaaga ggaaaagatg
541 aattaatttt aggtatattg cttgtatatc ccatagtgtc atttatagca aaatgagtgt
601 ttagatgacg agtttcatgt tgaacctgga ctacgaacaa gtccatcatt cgggaatcta
661 gaaaggcctg atcgatgata tacgtttcga ggaacataat gaagccctcg tttaaccacc
721 agtgagacgg actgaagaga tcaccaaacc attgatatgt tatatcatga gctactgagc
781 gcattactgt agttttaaac gcagcaggat gtaattcttc attgtagata atatctgatt
841 ccttgtaaaa aaccagtccc cacgtctgcc agattttgtc ttcgaaattc ggaatagcga
901 cataatccac ttttggaacg tttttcaaca tcttccaatt gttttctaaa tacatagtta
961 catttccagc aacatattgc gcgaatttca tgtggggtat caagtgcgat ctgcaccatg
1021 tattgaccac aatcttcgtc gggtcaaaaa ctgtcgaatt aaaaacctga tataattcgt
1081 caacatcata ctttataatt gctatgtcgt ttgtagacat gtgaggtgtc gtgtggaaca
1141 gtgttctcat ccagttatca tctatagatt cgtattctcg tatcggcgca ttcgataaaa
1201 ctttgttatt tattttatgg tgtacggtaa tgttaaaagt ggcagttaat tccggctcgt
1261 cccaacacgg aaataattgt cg
//