LOCUS LJ655166 5586 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68939.graph_c0_seq185.
ACCESSION LJ655166
VERSION LJ655166.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 5586)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5586
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68939.graph_c0_seq185"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1724 a 958 c 911 g 1993 t
ORIGIN
1 acgtatcgtg tgccgctggc tttatattta ttaaagatag gttaatctac agctattagt
61 taacatcgtt gacatgtttc actaagttga taatcatatc ttacattaca atacgtattt
121 acaattagtt gtcttttatt gcttatttta aaaacaagaa aatgacttcc aagtctgaaa
181 tcatattgga acatttttat atttttaacg gtacatatgc caagaaggaa ggagaggaag
241 aaaaaaaaat attatattat tatccagaga aagatttaga tgttcaaata aaaaacatag
301 ggctcagtga agcaataatc aaatttacag aatcgtttaa tcccggccaa ccttgtgatt
361 attgccacac acacaaaaca cgtcaaatat actaccaacc agagcctaat ttttggatgg
421 ttatgattgt tggtatacca tacatttata aagaaggaga cggtaacaaa tatcaaaacg
481 atgaggtatc cagtagcatt tgtcaagcta tattgaaaca aacatacatg atgtttagat
541 tattcatggg ttcctttgaa actatcatta atgatcctga atgtgggtct gtaatgttac
601 tgaaacttaa gctggaacat ttttattcac gagtaagcaa atgtgcattt ctgttactaa
661 attatatata gtttgataca tcaatacata tttttacttg tattacattt tatttttaac
721 ttgtttcagt atctgctctc attaaagtta aataatagcg atattttaga tgtttttcaa
781 ggtttacaat ttttacctct tgacaaaatc acatttctta gagtacaatg tttcatgaat
841 ctagtagaag ctatgtttac acaaataaaa tacacagcat ttctttataa tgaccagatt
901 gtttggtaag ttaaatgttt tattttatat tatattactt ttattatgat aaatgtattg
961 gataattttt aaacattttg tgatgtacgc ttaggagtgg attggaacct gaggatatgc
1021 aagtagttta taattattta gtgagcactc ttttgccagc tcatcttgaa aaagagttgc
1081 atggcggctc tatacctagg aactctcctt caccattcac aactacgcat tatggaaaat
1141 ttgttaccgg gcctgctaat gttaatgagc ccaatttaat tggcaaatca ccaaaagttt
1201 ttatcaatta ctctaccaaa cctgtgtcat tgtatctagt agtgtatcga gctttaagtg
1261 caacaatatg tctctttgtt gatagtaagt gaattattta aaatttagtt atatttttgt
1321 caacatgaaa attgaaatat ttatatattt tttcagagaa aactagttta ttaattgatt
1381 ttttcaaaag cttagataat tttctgggtc cacagttaac cacattggtc agttctgtag
1441 ctgagcaatg ctctaaacat gtaatagtca caccggaatc ctgcaccaag tatctgtatt
1501 ttaataagct aaatctagca tacaaaagta caatacattt agataataga tgttgttcta
1561 acgtacttac gacacctgag gtgttgagaa ttattgctga tatatacaat gatagaaata
1621 gattgaacga ggctggagaa ataattataa agactataag tgattattgg attgttggaa
1681 aattatctaa tttgagggaa ttttttgtta ttatacaaca gaaaagtgca agtattatag
1741 aaattgatgg tgagtgcaat atattctatg atatgcaatt gacactatta atataattgc
1801 acaaatcttt gtttgttata gatgaagtga agaggctttg tgagaaacaa ttaaaaagta
1861 ttttttttca ctaacggata tgtaataaac caatgaaaat aatgaaatca caaacacgat
1921 tctcattttt gtggataaat aaaaataaat tttaggataa ataatttctc ataatagaac
1981 agttttctgt ttcattttgc taattatcag caaaagcaat atgcatttta gtgagataat
2041 atcttaatta tagagttgta tactttatac atattatata acagttatta atttttacta
2101 tgtatattta tatgtatttt ttaatattct ttatcatgaa aagttgaacg tttgtctgtg
2161 aaacattata cgggtgatat ataaatatgg tgaactagtg tcaagatata ataatattta
2221 tactccgaca taatccgatt ataaacaaaa ttattgtata aatcgattaa aatgttaatt
2281 agatgtttct tcgtttacat tgttttgatt aggaataata ttggagaact tttttaattt
2341 tgctacaaag aaaccataca tgttatgcac atgtggataa taccttttag ttaatttcag
2401 cgaagggtga aatcgatgtt gtctgtagct cgtgaaacca tcagttccga attctaagcc
2461 agtgggcaat aacttaacat tacgtttttt gagagcataa tcgataatcc actcattttc
2521 ttctggtaaa atcgagcaag ttgagtaaac aacaatgcca ccagtttccg aacgagcatt
2581 aacgcaatct attgcagcta gcaacaattc cctctgtaat gtgcaacaac gttgaatatc
2641 tacttcctct ttatttgtct tcacactgag atccttcgcg attactccta tgcctgtgca
2701 cggagcatcc aacaagactc tgtcaaagcc ttttataatc gtaggaaatt gtcttccgtc
2761 ataattgcag attgtggaat ttgtaatacc aattctgtga agattaccaa caacagcctt
2821 cagtcgatct ttatttatat cgttagcgaa caacattccg gtgttcttca tgagtgcggc
2881 aatatgcgag gctttaccgc ctggtgcggc acacatgtcg agaattcttt cattttcttt
2941 tgggtctagc gccataacgg gtaagaagct agcagcacct tgtataatgt aatgtccagc
3001 tagatattct ggtgttgcac ccatgggtac ttgcgaggaa tacactacta aaccaacctt
3061 cgtccatttc cctatcgggt cgagattaac acccctattg attagagcct ctgctaaatc
3121 ccgtcgtcgc gttttcaaag tatttgtacg gatggtcata ggtctttcta cttcactcgc
3181 ttctaaaaat tctaataatt catccagtga gaacatttgc atcaattttt ccatcaagaa
3241 atcattataa ctgtaatatg tacataaatc tcgtcgaagt aattcaatat attcagaacg
3301 cgatctattt ttcacccgta atctcttaaa atctgataat actattataa tgtctcgtat
3361 tcgttgttga atatctttta agttagtgac attagcaagt tcttcttcag ttggaaaaga
3421 gaatatgctt tgatgagcaa tcatattgtc catttcttct tgtgcaagct tttcttcttc
3481 ttgttttttc tgttttaatt ttttattagc tttttctatt ggaagtggat catcatctgt
3541 ctcttcatta tgctccattt gctcatcaat aacttcttcc tcgttactga atataatttc
3601 ttcactgtca ctttctacat tattcacaaa cttctttttt gcttttttca attttgttgc
3661 aaaaagtgat tgattgtcat catcctcttc accttgcttc atttgtccat cttcaatatt
3721 gtcatcagct tcctcattat catcttcatt gttattaaca gctgatttaa atttcttttc
3781 tttcttcttt tttggcttct ttgatatatt tttttcattt tttatttgta tctgttcttc
3841 tttgggattg gtttttttct taagtaatat ttttgtatct tctttcagct gtggattctt
3901 taataatctc ttctgtatcc tttgtttttg acgatgactt aacttactta tctctttaac
3961 tagaactcct tttggaaaag ttggatcatt ttgctttttc accttttttc catgtccaat
4021 ggaaacttgg gttccatcaa attttgctct acgacccatc tatatagctc aaaatgtgaa
4081 atcttcttat gaaaaggtta gaatcaagtc cacgactttt ggctgcgttc caaaattcac
4141 tgccagtact gaaaatttgt agtatacata acgtgtatag gattttcaat tctggaagtg
4201 tttattggaa tgcagcctat atattgcatg ccttaaattt aaacgccaaa acttcaggag
4261 tgtgtacggc aagatcaata aactaagaaa aaaaataagt ttttcgtttt tttaacaatc
4321 acaaaataat aaaaattttt ttaatttttc acttatttat tactttattt gtttacattg
4381 agcctataca tgatattttc tttaattaac aattcctctt cttataaatg ttaatttgat
4441 ccattttgta aatgcagttt gatatatttt gtaaatgtgt gcttcatcca tccacattat
4501 ttttaataga aatgaattgt catttgtgaa atgactcaag aaaccaattg aattgttaaa
4561 attcaatttc ttgatgtaat ctcgaggtta actaaattcg atatctttta aaaataatac
4621 gagcggtatt tgactgtaat acgagcaatg ctagatgcga gacttgcatt gttacaagtg
4681 atcaacattt ttaacaatac cttaagaaag ccaacataaa taaatacgta taaataaata
4741 agtgaaaaaa tgactcattc gttttttttg cgattttctt taaaacgaag aaacaatgga
4801 taaatcatta aaaaagcctt tttcttttag ttcattatta atctcccaca cgctctcgaa
4861 gttttaacat ttaaattcaa gacactctgt atacataggt atcgcatatt aagaaataaa
4921 tataataaga acacaaaaat actccagagt agtaacaagc acgtgcaatt attcgggtac
4981 gggagcaaag cgtcaacatt ctaatctcga ggggattcaa gcattttgga gactgtctga
5041 agcgatcgtg tcgatcaatg ttcgattcgc cggttaacga agttttctct ccatttatat
5101 tacaaataga aattacagtc tagagagagg cagcggcgaa tcgctaacaa taagcagagt
5161 cacccgatcc cgaaatgtcg gtttcgcgca ccacgaccga cgtatcagtc tatatcacag
5221 aaacggaact ctccatttcg ttcgcagtct tcttctcgtc gccgtcgtcc gcattgtcgc
5281 cgtgatcgcc gtgattatcg ctatcgcgac agttgcggtc gtcgacctgt tcgctgggga
5341 ctagatgcgc gtccttcgat aggatcaggg agtcctcgcc gataggcgcg gcggcctcga
5401 ctagattctc gacggacgct gccgtcgtcg gttcctcgtg gcaaaaactc ctacgtaagg
5461 attgctgcgt tctcgcagtg cccctgcgta tgctgctacg caacaaattc gccacatcgg
5521 tggccgtcag gttcgagccg gacaaggtgt gcgtggcagc gaggctcgcg cacggccgac
5581 gaccac
//