LOCUS LJ655151 3949 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68939.graph_c0_seq170.
ACCESSION LJ655151
VERSION LJ655151.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3949)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3949
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68939.graph_c0_seq170"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1237 a 647 c 610 g 1455 t
ORIGIN
1 acgtatcgtg tgccgctggc tttatattta ttaaagatag gttaatctac agctattagt
61 taacatcgtt gacatgtttc actaagttga taatcatatc ttacattaca atacgtattt
121 acaattagtt gtcttttatt gcttatttta aaaacaagaa aatgacttcc aagtctgaaa
181 tcatattgga acatttttat atttttaacg gtacatatgc caagaaggaa ggagaggaag
241 aaaaaaaaat attatattat tatccagaga aagatttaga tgttcaaata aaaaacatag
301 ggctcagtga agcaataatc aaatttacag aatcgtttaa tcccggccaa ccttgtgatt
361 attgccacac acacaaaaca cgtcaaatat actaccaacc agagcctaat ttttggatgg
421 ttatgattgt tggtatacca tacatttata aagaaggaga cggtaacaaa tatcaaaacg
481 atgaggtatc cagtagcatt tgtcaagcta tattgaaaca aacatacatg atgtttagat
541 tattcatggg ttcctttgaa actatcatta atgatcctga atgtgggtct gtaatgttac
601 tgaaacttaa gctggaacat ttttattcac gatatctgct ctcattaaag ttaaataata
661 gcgatatttt agatgttttt caaggtttac aatttttacc tcttgacaaa atcacatttc
721 ttagagtaca atgtttcatg aatctagtag aagctatgtt tacacaaata aaatacacag
781 catttcttta taatgaccag attgtttgga gtggattgga acctgaggat atgcaagtag
841 tttataatta tttagtgagc actcttttgc cagctcatct tgaaaaagag ttgcatggcg
901 gctctatacc taggaactct ccttcaccat tcacaactac gcattatgga aaatttgtta
961 ccgggcctgc taatgttaat gagcccaatt taattggcaa atcaccaaaa gtttttatca
1021 attactctac caaacctgtg tcattgtatc tagtagtgta tcgagcttta agtgcaacaa
1081 tatgtctctt tgttgatagt aagtgaatta tttaaaattt agttatattt ttgtcaacat
1141 gaaaattgaa atatttatat attttttcag agaaaactag tttattaatt gattttttca
1201 aaagcttaga taattttctg ggtccacagt taaccacatt ggtcagttct gtagctgagc
1261 aatgctctaa acatgtaata gtcacaccgg aatcctgcac caagtatctg tattttaata
1321 agctaaatct agcatacaaa agtacaatac atttagataa tagatgttgt tctaacgtac
1381 ttacgacacc tgaggtgttg agaattattg ctgatatata caatgataga aataggtaca
1441 tacacacttc caaaaataaa aaaatggata gacaaagaga ttaattaata atttgatgct
1501 tagattgaac gaggctggag aaataattat aaagactata agtgattatt ggattgttgg
1561 aaaattatct aatttgaggg aattttttgt tattatacaa cagaaaagtg caagtattat
1621 agaaattgat ggtgagtgca atatattcta tgatatgcaa ttgacactat taatataatt
1681 gcacaaatct ttgtttgtta tagatgaagt gaagaggctt tgtgagaaac aattaaaaag
1741 tatttttttt cactaacgga tatgtaataa accaatgaaa ataatgaaat cacaaacacg
1801 attctcattt ttgtggataa ataaaaataa attttaggat aaataatttc tcataataga
1861 acagttttct gtttcatttt gctaattatc agcaaaagca atatgcattt tagtgagata
1921 atatcttaat tatagagttg tatactttat acatattata taacagttat taatttttac
1981 tatgtatatt tatatgtatt ttttaatatt ctttatcatg aaaagttgaa cgtttgtctg
2041 tgaaacatta tacgggtgat atataaatat ggtgaactag tgtcaagata taataatatt
2101 tatactccga cataatccga ttataaacaa aattattgta taaatcgatt aaaatgttaa
2161 ttagatgttt cttcgtttac attgttttga ttaggaataa tattggagaa cttttttaat
2221 tttgctacaa agaaaccata catgttatgc acatgtggat aatacctttt agttaatttc
2281 agcgaagggt gaaatcgatg ttgtctgtag ctcgtgaaac catcagttcc gaattctaag
2341 ccagtgggca ataacttaac attacgtttt ttgagagcat aatcgataat ccactcattt
2401 tcttctggta aaatcgagca agttgagtaa acaacaatgc caccagtttc cgaacgagca
2461 ttaacgcaat ctattgcagc tagcaacaat tccctctgta atgtgcaaca acgttgaata
2521 tctacttcct ctttatttgt cttcacactg agatccttcg cgattactcc tatgcctgtg
2581 cacggagcat ccaacaagac tctgtcaaag ccttttataa tcgtaggaaa ttgtcttccg
2641 tcataattgc agattgtgga atttgtaata ccaattctgt gaagattacc aacaacagcc
2701 ttcagtcgat ctttatttat atcgttagcg aacaacattc cggtgttctt catgagtgcg
2761 gcaatatgcg aggctttacc gcctggtgcg gcacacatgt cgagaattct ttcattttct
2821 tttgggtcta gcgccataac gggtaagaag ctagcagcac cttgtataat gtaatgtcca
2881 gctagatatt ctggtgttgc acccatgggt acttgcgagg aatacactac taaaccaacc
2941 ttcgtccatt tccctatcgg gtcgagatta acacccctat tgattagagc ctctgctaaa
3001 tcccgtcgtc gcgttttcaa agtatttgta cggatggtca taggtctttc tacttcactc
3061 gcttctaaaa attctaataa ttcatccagt gagaacattt gcatcaattt ttccatcaag
3121 aaatcattat aactgtaata tgtacataaa tctcgtcgaa gtaattcaat atattcagaa
3181 cgcgatctat ttttcacccg taatctctta aaatctgata atactattat aatgtctcgt
3241 attcgttgtt gaatatcttt taagttagtg acattagcaa gttcttcttc agttggaaaa
3301 gagaatatgc tttgatgagc aatcatattg tccatttctt cttgtgcaag cttttcttct
3361 tcttgttttt tctgttttaa ttttttatta gctttttcta ttggaagtgg atcatcatct
3421 gtctcttcat tatgctccat ttgctcatca ataacttctt cctcgttact gaatataatt
3481 tcttcactgt cactttctac attattcaca aacttctttt ttgctttttt caattttgtt
3541 gcaaaaagtg attgattgtc atcatcctct tcaccttgct tcatttgtcc atcttcaata
3601 ttgtcatcag cttcctcatt atcatcttca ttgttattaa cagctgattt aaatttcttt
3661 tctttcttct tttttggctt ctttgatata tttttttcat tttttatttg tatctgttct
3721 tctttgggat tggttttttt cttaagtaat atttttgtat cttctttcag ctgtggattc
3781 tttaataatc tcttctgtat cctttgtttt tgacgatgac ttaacttact tatctcttta
3841 actagaactc cttttggaaa agttggatca ttttgctttt tcaccttttt tccatgtcca
3901 atggaaactt gggttccatc aaattttgct ctacgaccca tctatatag
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