LOCUS LJ654993 5473 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68939.graph_c0_seq12.
ACCESSION LJ654993
VERSION LJ654993.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 5473)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5473
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68939.graph_c0_seq12"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1692 a 947 c 895 g 1939 t
ORIGIN
1 acgtatcgtg tgccgctggc tttatattta ttaaagatag gttaatctac agctattagt
61 taacatcgtt gacatgtttc actaagttga taatcatatc ttacattaca atacgtattt
121 acaattagtt gtcttttatt gcttatttta aaaacaagaa aatgacttcc aagtctgaaa
181 tcatattgga acatttttat atttttaacg gtacatatgc caagaaggaa ggagaggaag
241 aaaaaaaaat attatattat tatccagaga aagatttaga tgttcaaata aaaaacatag
301 ggctcagtga agcaataatc aaatttacag agtatgtatc acaattatat ctttctataa
361 agaatatttc tacaaagatc attacagatc gtttaatccc ggccaacctt gtgattattg
421 ccacacacac aaaacacgtc aaatatacta ccaaccagag cctaattttt ggatggttat
481 gattgttggt ataccataca tttataaaga aggagacggt aacaaatatc aaaacgatga
541 ggtatccagt agcatttgtc aagctatatt gaaacaaaca tacatgatgt ttagattatt
601 catgggttcc tttgaaacta tcattaatga tcctgaatgt gggtctgtaa tgttactgaa
661 acttaagctg gaacattttt attcacgata tctgctctca ttaaagttaa ataatagcga
721 tattttagat gtttttcaag gtttacaatt tttacctctt gacaaaatca catttcttag
781 agtacaatgt ttcatgaatc tagtagaagc tatgtttaca caaataaaat acacagcatt
841 tctttataat gaccagattg tttggtaagt taaatgtttt attttatatt atattacttt
901 tattatgata aatgtattgg ataattttta aacattttgt gatgtacgct taggagtgga
961 ttggaacctg aggatatgca agtagtttat aattatttag tgagcactct tttgccagct
1021 catcttgaaa aagagttgca tggcggctct atacctagga actctccttc accattcaca
1081 actacgcatt atggaaaatt tgttaccggg cctgctaatg ttaatgagcc caatttaatt
1141 ggcaaatcac caaaagtttt tatcaattac tctaccaaac ctgtgtcatt gtatctagta
1201 gtgtatcgag ctttaagtgc aacaatatgt ctctttgttg atagtaagtg aattatttaa
1261 aatttagtta tatttttgtc aacatgaaaa ttgaaatatt tatatatttt ttcagagaaa
1321 actagtttat taattgattt tttcaaaagc ttagataatt ttctgggtcc acagttaacc
1381 acattggtca gttctgtagc tgagcaatgc tctaaacatg taatagtcac accggaatcc
1441 tgcaccaagt atctgtattt taataagcta aatctagcat acaaaagtac aatacattta
1501 gataatagat gttgttctaa cgtacttacg acacctgagg tgttgagaat tattgctgat
1561 atatacaatg atagaaatag attgaacgag gctggagaaa taattataaa gactataagt
1621 gattattgga ttgttggaaa attatctaat ttgagggaat tttttgttat tatacaacag
1681 aaaagtgcaa gtattataga aattgatgat gaagtgaaga ggctttgtga gaaacaatta
1741 aaaagtattt tttttcacta acggatatgt aataaaccaa tgaaaataat gaaatcacaa
1801 acacgattct catttttgtg gataaataaa aataaatttt aggataaata atttctcata
1861 atagaacagt tttctgtttc attttgctaa ttatcagcaa aagcaatatg cattttagtg
1921 agataatatc ttaattatag agttgtatac tttatacata ttatataaca gttattaatt
1981 tttactatgt atatttatat gtatttttta atattcttta tcatgaaaag ttgaacgttt
2041 gtctgtgaaa cattatacgg gtgatatata aatatggtga actagtgtca agatataata
2101 atatttatac tccgacataa tccgattata aacaaaatta ttgtataaat cgattaaaat
2161 gttaattaga tgtttcttcg tttacattgt tttgattagg aataatattg gagaactttt
2221 ttaattttgc tacaaagaaa ccatacatgt tatgcacatg tggataatac cttttagtta
2281 atttcagcga agggtgaaat cgatgttgtc tgtagctcgt gaaaccatca gttccgaatt
2341 ctaagccagt gggcaataac ttaacattac gttttttgag agcataatcg ataatccact
2401 cattttcttc tggtaaaatc gagcaagttg agtaaacaac aatgccacca gtttccgaac
2461 gagcattaac gcaatctatt gcagctagca acaattccct ctgtaatgtg caacaacgtt
2521 gaatatctac ttcctcttta tttgtcttca cactgagatc cttcgcgatt actcctatgc
2581 ctgtgcacgg agcatccaac aagactctgt caaagccttt tataatcgta ggaaattgtc
2641 ttccgtcata attgcagatt gtggaatttg taataccaat tctgtgaaga ttaccaacaa
2701 cagccttcag tcgatcttta tttatatcgt tagcgaacaa cattccggtg ttcttcatga
2761 gtgcggcaat atgcgaggct ttaccgcctg gtgcggcaca catgtcgaga attctttcat
2821 tttcttttgg gtctagcgcc ataacgggta agaagctagc agcaccttgt ataatgtaat
2881 gtccagctag atattctggt gttgcaccca tgggtacttg cgaggaatac actactaaac
2941 caaccttcgt ccatttccct atcgggtcga gattaacacc cctattgatt agagcctctg
3001 ctaaatcccg tcgtcgcgtt ttcaaagtat ttgtacggat ggtcataggt ctttctactt
3061 cactcgcttc taaaaattct aataattcat ccagtgagaa catttgcatc aatttttcca
3121 tcaagaaatc attataactg taatatgtac ataaatctcg tcgaagtaat tcaatatatt
3181 cagaacgcga tctatttttc acccgtaatc tcttaaaatc tgataatact attataatgt
3241 ctcgtattcg ttgttgaata tcttttaagt tagtgacatt agcaagttct tcttcagttg
3301 gaaaagagaa tatgctttga tgagcaatca tattgtccat ttcttcttgt gcaagctttt
3361 cttcttcttg ttttttctgt tttaattttt tattagcttt ttctattgga agtggatcat
3421 catctgtctc ttcattatgc tccatttgct catcaataac ttcttcctcg ttactgaata
3481 taatttcttc actgtcactt tctacattat tcacaaactt cttttttgct tttttcaatt
3541 ttgttgcaaa aagtgattga ttgtcatcat cctcttcacc ttgcttcatt tgtccatctt
3601 caatattgtc atcagcttcc tcattatcat cttcattgtt attaacagct gatttaaatt
3661 tcttttcttt cttctttttt ggcttctttg atatattttt ttcatttttt atttgtatct
3721 gttcttcttt gggattggtt tttttcttaa gtaatatttt tgtatcttct ttcagctgtg
3781 gattctttaa taatctcttc tgtatccttt gtttttgacg atgacttaac ttacttatct
3841 ctttaactag aactcctttt ggaaaagttg gatcattttg ctttttcacc ttttttccat
3901 gtccaatgga aacttgggtt ccatcaaatt ttgctctacg acccatctat atagctcaaa
3961 atgtgaaatc ttcttatgaa aaggttagaa tcaagtccac gacttttggc tgcgttccaa
4021 aattcactgc cagtactgaa aatttgtagt atacataacg tgtataggat tttcaattct
4081 ggaagtgttt attggaatgc agcctatata ttgcatgcct taaatttaaa cgccaaaact
4141 tcaggagtgt gtacggcaag atcaataaac taagaaaaaa aataagtttt tcgttttttt
4201 aacaatcaca aaataataaa aattttttta atttttcact tatttattac tttatttgtt
4261 tacattgagc ctatacatga tattttcttt aattaacaat tcctcttctt ataaatgtta
4321 atttgatcca ttttgtaaat gcagtttgat atattttgta aatgtgtgct tcatccatcc
4381 acattatttt taatagaaat gaattgtcat ttgtgaaatg actcaagaaa ccaattgaat
4441 tgttaaaatt caatttcttg atgtaatctc gaggttaact aaattcgata tcttttaaaa
4501 ataatacgag cggtatttga ctgtaatacg agcaatgcta gatgcgagac ttgcattgtt
4561 acaagtgatc aacattttta acaatacctt aagaaagcca acataaataa atacgtataa
4621 ataaataagt gaaaaaatga ctcattcgtt ttttttgcga ttttctttaa aacgaagaaa
4681 caatggataa atcattaaaa aagccttttt cttttagttc attattaatc tcccacacgc
4741 tctcgaagtt ttaacattta aattcaagac actctgtata cataggtatc gcatattaag
4801 aaataaatat aataagaaca caaaaatact ccagagtagt aacaagcacg tgcaattatt
4861 cgggtacggg agcaaagcgt caacattcta atctcgaggg gattcaagca ttttggagac
4921 tgtctgaagc gatcgtgtcg atcaatgttc gattcgccgg ttaacgaagt tttctctcca
4981 tttatattac aaatagaaat tacagtctag agagaggcag cggcgaatcg ctaacaataa
5041 gcagagtcac ccgatcccga aatgtcggtt tcgcgcacca cgaccgacgt atcagtctat
5101 atcacagaaa cggaactctc catttcgttc gcagtcttct tctcgtcgcc gtcgtccgca
5161 ttgtcgccgt gatcgccgtg attatcgcta tcgcgacagt tgcggtcgtc gacctgttcg
5221 ctggggacta gatgcgcgtc cttcgatagg atcagggagt cctcgccgat aggcgcggcg
5281 gcctcgacta gattctcgac ggacgctgcc gtcgtcggtt cctcgtggca aaaactccta
5341 cgtaaggatt gctgcgttct cgcagtgccc ctgcgtatgc tgctacgcaa caaattcgcc
5401 acatcggtgg ccgtcaggtt cgagccggac aaggtgtgcg tggcagcgag gctcgcgcac
5461 ggccgacgac cac
//