LOCUS LJ652399 1003 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68950.graph_c0_seq7.
ACCESSION LJ652399
VERSION LJ652399.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1003)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1003
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68950.graph_c0_seq7"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 356 a 165 c 193 g 289 t
ORIGIN
1 ttgttttgtg taaaaacgcg tcgattaagc ttattcatca atatcgaaga ttgtaacaaa
61 aatgactttt tccaatctga tggggtggat gatgaaggag aaaatgcagc ttctaacaat
121 atggccaagt attgttgaag acctcacaaa ttcaaggaca gacaatgata tccttaacag
181 acacatgaca aaagtattag aatataatgt gcccggagga aaacaattta gagcgttgat
241 gttaatatat gcttatcagt tattagcaaa caaacaactt acaaaagaaa atatgcgtct
301 agcacggatt gtagcatggt gtggagaact gatgcaagct gctgctctca tggttgacga
361 tattcaagac aactcagtac ttcgtcgaga tcaaccatgt tggtaccgaa gcgataatgt
421 agggttgtta gtaataacag atgctctaaa gttagaaaat tctgtatatt atctacttca
481 aaagtacttc aaagggaaag actgctatgt taatctacta gaaacattcc atgatatggc
541 attaaaaaca atagatggcc aaatattaga cctacagctg tctaaaaatt ttagaaagaa
601 gctaaatttg aacttattca caatggatca atacaggtgt attgtcaaga acaaaacgtc
661 gtattattca tttgtttgtc cagtattcct agcaatgaat ttagctggaa taaataaccc
721 agaaaagttt aagcaagcag aaacgatttt attggaaatt ggacatttat tccaagtcca
781 agatgacttt ttggatttct taggagattc agaagccact ggcaaagaca gcactgatat
841 acaacaagga aaatgtacgt ggtttgttgt aatggctctt caacgcgcca ctccaaaaca
901 gcgtgaaatt ttagaagtat ttgtagcaac cctacaagat ttttgcaatc ttgctacttg
961 ctatgcaata ctgtaagcga gactgtaagc tttatgcaac agc
//