LOCUS LJ643950 1938 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68407.graph_c4_seq2.
ACCESSION LJ643950
VERSION LJ643950.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1938)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1938
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68407.graph_c4_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 597 a 369 c 379 g 593 t
ORIGIN
1 tgtgtgtgtg tgtgtgtgtg tgataatgta tgcgcatata cgaaatagca cgaaaacaac
61 tcgtcacagg aaaggaatgt tttgcataaa aattgcaatg taagcaattt ttatgcaaga
121 caaatgttcc gtttgaagaa tgattctcgc atatcccgta catccgcgta tctgtactcg
181 atttgtgtgc gtgaatgtgt gtagcatcgt tgttagtttt attttttttt ttataaataa
241 aagtagtgcg gttgtgcatc ttatacaatg gatgaaattg cgcctatgac aaggaaagtc
301 aattatgtat aaaaaaaatt ataatacttg ttagtgagat aaaatatgta aaaggacggg
361 agagatgcca tctccggcag cattgtccgc actttcgcgg tttacttctg cttccctttc
421 tctttcaact cgaacccgtt aatagtgaga aaaatgcgga gatcaatgtg aaaggcaaat
481 cgattttagc cactcgttaa cacgataagg acgaggcaaa aagcaaaacg ggaagcgcaa
541 aagaataaat aaataaataa attattactc gcgtgcgtcc gattctctcg agactcgagt
601 caaagaggta aaatatcaag ccgcgtcgat agagacgatt tacaggcgac agaccggatc
661 gttgcgtaaa ccttcgcatc gtaccgcgtt accatccctt gatttctcat tcgcacaacg
721 gatatgcgta cttcttggat gcaggtagtc tattaatgtc gtacaacaat ttctggattg
781 acgccctgtg cttacgcgag tgaaatcttt tgtaacaaag caaggcgtat aaataaaatc
841 gtcgagagag agacttcatg ggatttcccc ggtatctcga cggtatttcg ttctggagct
901 tctttgccga tcggaagcaa tactcgcgtc tacaagcgga caaacgtccg cttcgcgaac
961 acatgcgcgc ctaggctgcg cttcgttctc gtaaaataat ttgtcccttt ttttttttaa
1021 tttacattcg agagaagaaa gaccaaacgc gaagaatata gcagtaggat aataatcatc
1081 cggatttccg cgcgacgaat gcaacacgag cgatcgtaga ttcgcggatt agccgcgcgc
1141 gcgaccctcg ggatgcagcg agccgtattt tacaattttc ctctcggccg cgaatctaat
1201 tataaattcg gcctgacgca aggtgttgtt cgcgcgatct attttcaccc gagcgaataa
1261 tctcgcgtcg cggtcaaagc aacacgccgg gtaaccgaga gaagatgcgt tttgcgttcg
1321 cgtcccttat tctgctgcat caaggagtct gctcaaagtc acacacctga gaatcttccc
1381 caatcttccc ggcgcgacag cgactccgtg caaaactcga tttgcgtcca acacccggag
1441 ataattcggg taaaaaaata tttagttgtg cacggttaca cgattaaaga aaagtttctt
1501 tgatctgaag aaatttcttg gttgtttttt tcattggaat taaatacttt gtgcaaatct
1561 tttttttttt tttttaataa aagtaatata ttgtgaaaac cagaattaaa ttatttcttg
1621 catgtgtgtc tttctttaaa ttaaaaaatt atatgtttaa aaaaataatt taaacaaata
1681 ttttttgttt atttacttta agaaaaatta ataattcgtc attcgtttct tgaaatcaaa
1741 taaatccttg ttttcctcaa aggtattttc aacttaaaaa aaccaagtta gaaaaacgat
1801 ttcatcaatt taagcataat ttttatctgg atgaagaaac caaattcttt ttttttccac
1861 atttgcatcg cacgaaaatt ccaatttttt tttaagcata tataagcttt acagagatat
1921 gtaaaaaaaa aaaaaaaa
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