LOCUS LJ635066 3455 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67619.graph_c0_seq10.
ACCESSION LJ635066
VERSION LJ635066.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3455)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3455
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67619.graph_c0_seq10"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1270 a 557 c 637 g 991 t
ORIGIN
1 ggcagccacc taacctttaa tggttgctac tgatcgagta acgagtacgc gataaagagt
61 ctattttata acgttttgag atacttatga ttgcaaattg ctgtaccgta cattatcgct
121 ttctgacttt ttcgtacgaa ttagtaacat tgcgacgatg tcggcgacca agcaacaaat
181 gactgagaaa caaaggctca agaaaatgag caaggcgcag atgcagctag cgatcgtaaa
241 gaagaaacaa tgtgacgcga aagctctcaa gatagtcgag cagcttctag aatcgcacgt
301 gaattctgac tggcttcttc aaaacctggg attcataagc aagactcaca tggaagatgt
361 gatagaggaa cgagcgataa taaagttatg tggatatgtt ctttgttcaa atcaactaac
421 cgtcatcatc catcaacagt atcacatatc gacacgcaag aataaagtgt atgacatcag
481 tagacggaag aacttctgta gctcgacgtg ttatggggca gccaattatc ttcttgaaca
541 aatgcttgag agtccactgt ggttgagaga gaaggaggat ataccagtct ttcaagtctt
601 gcctttaaac tctaagtcta cacagtgcgg agacgagatc gacgttgtcg gtattaatct
661 ctcgcaaaat gtaaacgcta atgataacca tgacggaaaa caatttgcag aatgtagcat
721 agtcaagcag atggagaaag atgtggcaag taatgtatca aaccctgaaa aagaaaatat
781 atgcaacttt tatttgttga atgatgtaac tgctgggaag gatgaaaaag gccaagaaat
841 ttctgtagat actaatttac aaagatcaga ttcaaatgga tgtgaaacac atccatttga
901 actacctgcg aatcaagtaa ataaaaactg tgattttgaa gagttgacaa atgatgaaaa
961 taattatgat aacaataaca ttcaacaagt agatgtaaac ctagaaaatt tagaagtaga
1021 aattgctggt caatctaaaa atattttaca cctgcataaa cacaatagtg atacaaggaa
1081 aaataagaat gtgaatacat gtgataatga taagatatta cagtctcaat tggacaaaca
1141 aaatgacatt agtgaaaaac tacagcttcg atcaattaaa ataagtgaag acaagaaaaa
1201 tgacactagt gaaaggctac agcctcaatt agttaaaata agtgaagaca agaaagataa
1261 taaaaatgaa aaaaggttgc aacctttatt gaatgaaaca aatgatgaaa aaatgataca
1321 atctcaatta gatgaagttc atagtagtaa taatactgtg atttctgcat ctacatccaa
1381 taaatataga aagataggag aggcaaatag aattaataaa aataaaaaat gtaagcttaa
1441 agacactgac tgtacagaaa cacaaaataa tatttatcac aaacttgcaa tgcatattga
1501 acagaatatt agagaatggg tcacaaaaaa tacactttgc cttctaacag gcgaggcaga
1561 tgaaaagaat cagttattag agaagcttac gcaatgcgac aggtatcagc agttgtgtaa
1621 aaagttaaat aaattgcaac tggaagatga aaaggaggat cgtgttaact tggagagaaa
1681 caatctcaaa cctttacccc acttatccac actccaagaa gatggaaaga aaatggaatt
1741 aaaggtacgt gcattttacg aaggacgaat gacgtttaca tccgaggata gtaataaaaa
1801 atcagaaagc aaagacaacg acgagcttgt attaccatta acggatgctc acgcgcccaa
1861 tgcacttcgt cgccgaattt tcttagacaa ccttaataaa atgtaatttc tacttttcag
1921 agatagagaa tcaaatgttg aacaaaaatt tagaatctaa aatttgatca ttgttattat
1981 atgcatgcat ttgttaatta cagattgcca gatttgatgc gcgctttaac aactaatgag
2041 aatatttctt cattggcaca atgtacttat aataacgaaa aatactcgtt aattaaaatc
2101 ttgatcagca cttttaattt atctgctaca aacattatct ttaaaactgc cgagtggaca
2161 cttgtgggac ttatcatcat taaaatgtaa gtttaattgt aattttacat ataaattaca
2221 tatataaaaa ttgattttaa aaatacatat aattttaggt tgagtttgat tgatatgcaa
2281 ttgcaatcat tgctcagatc taagcaagct tcaatgtaca tgtccatgat tctcacgacg
2341 tataaattgg attccaatta tttggacaga cttataatgg agataacgag taatgtggac
2401 gtatccgagt caagtgataa ataatgttaa ataaaaattg tgaaatatgt aaatattaaa
2461 acgattctta caatttttat tttattgtcc tcgtatttaa gttaacgtaa aatatatttt
2521 tgaaaatata atattaatct gaaaatccag acaaaatatt atcttatcaa taatgttttg
2581 tctgggtttt ctaaatgttt cgcagtattt tacattcact ttataaatta ttttattata
2641 aaaaagtagc tattaaagtt ctttcctgag aaatcatgga tatactgaag ataaaaaatg
2701 aaattagaag atacatgata ttatacatcg cagtgataca ctagtaaact gaggaagctc
2761 aaatcactct tacttttctt aaattagata ttaaagtggg cacgtgctcg atgttgatgg
2821 cggtattccg gtaaatacag agggagaaca atcgagactt aacgggtcta tttgagctgt
2881 tgctgctaat tggtcctcag tagaatgact accgactttg tcacgtaaag attcgtaaag
2941 agtatgaacc gcttcgttat gctgacttgt tggttgtaag gcttttagta atgagtgtaa
3001 ccgcgcggat ggcaatttag gatgtatgta ccaaagtaat ttcaataaat gccgtgtaac
3061 gttgtctcta cctaagccag ctaagaaaaa ttcgtcaaaa attactgtac agaaagattc
3121 gttcgagaac tcgtcagcca tgttcaatat taataatgaa accagtgtat gtaaaaatgg
3181 atcctcaaaa gctcgctgtg cttgacaatt tggtaatgtc gctaatactc tcatcaaacc
3241 tctggcatca cccctgcctc ttccaactcc accaccacct ccgacgtgta atgcgtagta
3301 catagacaaa actgccgcta ctccagaaag ctgtgcatac gcttgacacg catcgggagg
3361 tggtccggaa tgttctataa ttgctattgc actttctctt tcgtcaggtg gaagtctaca
3421 attgagctgt cttatttgat cgtcaaccat aagtg
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