LOCUS LJ632661 1210 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67931.graph_c2_seq3.
ACCESSION LJ632661
VERSION LJ632661.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1210)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1210
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67931.graph_c2_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 420 a 193 c 201 g 396 t
ORIGIN
1 gtttcattac ttgtattctc acctgttttc ctttaaattg gaaaaaaacg tcaaattaat
61 tttattatat gtaaacaaag ttacgaactg tccaaattgc gtagagcgaa ttcgcgtatg
121 ctacgtacgg tcatgcaaga tgtgtacaaa taaaagatta atcatgatat ctcattaatc
181 atagacaaca caaaaaaatt tttttgaggg ttaaacgttt taacatattt aattttaatt
241 gcaaaactta tctagcacat cacatatcgt agttataatg tgacaaagta cgtagccttt
301 ctttacaatt aattgcaaat ttctactaaa ttatgacaca aagaagcaat gtggaaacca
361 gatttagaaa tagaaatcag atacaaaaga agtataatta gtctcattct ggtgtccaaa
421 gtcatttttt ttaactgtgt aattatcatt actaatgtca tcgtgaaaaa tcttacttca
481 taaaaattct caacttgcag aaaacattta atctcctaaa aagtacatac caaaaatatt
541 tattgccata atattaaaac ttttcaatat tgcaattcta aaatcctatt tatctagttc
601 agatatttct ccgtgtatcc atcgattttt tcgtcattat tttgcgcata tgcaagtttg
661 gcaaagtttg gaaggaacac taagacaaca aacatcctaa tgattgttac atttcatgag
721 tttacacgcg agcaaaggaa gaaaaaagac aaagaaaaga gatgtacaaa aagagaaaaa
781 gaaaatgtat gtgttcgtgt atgtggatta ggtgaataat agtaactaac aattaataat
841 tacaggtaaa ataattctta agtgcatgtc gcgattacaa ttaaactgta acggatagca
901 attaagtaac aaataaaatt atgtgactag cgggcatcac gtaattttag ttttgttctt
961 tctaaaggct ggaaagtgca gtttcctgcg ccttcgttta agctcgtcgt tgtcggcggt
1021 agaattagaa tcagtcgaga gcgtctcgtc atcgatagac ataatcgtag gtaattcttt
1081 aagtaacttc ttggcgcctg ttgtacttgt cgtcatcgtt gttgtcgtcg tcattgtcgt
1141 cactgccgtc gttacagtca atgttgtcgc aggacgataa ttgggtctac ccgaaacatc
1201 aagcgaattt
//