LOCUS LJ630044 2950 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67561.graph_c0_seq1.
ACCESSION LJ630044
VERSION LJ630044.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2950)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2950
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67561.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1100 a 417 c 446 g 987 t
ORIGIN
1 gctgaagtcc ttgtacgatc tcggaagatc gactggtgct agcagccgaa atctaacgtt
61 cgaccgccag agttccatca ggtacagctc gaggagagcc aggacgctag agtccctcgc
121 atctttatac gaggaggacg atttaaaatc cacgttagaa gaatccgcag ctctacagag
181 agcctatgag aaatacatcg atcaggtgat cgtgaacgag gactttgaca atacgttcag
241 gcaggtgatc gcggctttgg attctttagc tacggagcat caatgggtgc cagtcaattg
301 gatctactaa tcgattcctg aacgcagcgt acggcatcgg tagattcaag aatcaagaag
361 tcaagatagc tgcaaagagt tttatcatac ggatgagaaa acgatttttt attactgcct
421 acgttacgta tgaaaacggc gaaatcatac ttccgaaaaa aatattcgga attactcagg
481 tagcaaagtt gcgtcgattt aatgtcatta attagataaa tctatgacaa atctgacgaa
541 tcttgatgtc aaagacatca taaaaatgac gtaaatttat cacagccacg taacgtcatg
601 tatatgtaga aaatacgcta ttattttcat gttttgtacc aaactaaatg atcaatgatg
661 ttactagtac gtcgtcgatt aataaactgg tcaaatgtca taattagtac gacattgtaa
721 atatatcgtg ggatgaataa ataaaagacg tcattaattt gtcaagaaaa taacgtcatt
781 acatcttaaa tagataacat gacatgacat caataatctg aaatgactaa ctaatgacat
841 aaaaagatga cgatagttta ctacctaagc aaactccgtt cgtcgcgcgg ctacgaaaac
901 acaaaacaca cgtattgtaa ttaagagtac aaagaatgtt atgaatatct cacgccgtgc
961 gaagcgatat cgatgcgttg tcgcgtaaag gacgcaatcg agaatctcat tatcatcgtt
1021 taataattaa atatacagcg tttgcattag ttcataaatt tacaaacgac ccgttctgca
1081 taaaaatttc attgatttta attttgcaaa ttactgtttt agtagaaaaa atttactaaa
1141 aattcgctga aattttgctg aaagtaatat tttagctgaa aaattggatg aaattttgct
1201 gcaatttcac tgaaattaat ttttacagta aaaatagtga aaaattaaat tgacgtttct
1261 ccacaaattt atccgaaatt tctctaaaaa tttactgaat cgtcgttaac atccttacta
1321 aaaatgattt ttactgaaac tcttgaatgt ttgctgaaaa ttctatgaaa cttctatgaa
1381 aataaattaa aatttttcca aaaactgttc taaaaatgta aatttttttg aaaatttttc
1441 tgatatcttt actaaaaata atttttaatt aaattgttga atagtcgcta aaattcgatg
1501 aaattaaatt aaagtgtctc aaaaaattaa tttcaaaaag ttttaaaagt gtaatgatat
1561 ttttctaaaa atgtattaaa atttttctaa cgtttcgcta aaagcgttgc aaaatattgt
1621 tgaaatacat gaaaattgaa agtcgcggaa gtttatctgt gttcaactgt gaacaatacg
1681 caacattgtc agcaagtgaa cacaggagtt ctgtattttt tgtaagtaaa aagatcacag
1741 gatgtagaat gaaaagcgca tcagtatctg tatgattttt gtcttgacaa aaatactttt
1801 tgaaacaaga ttttatatat ataacttttt atatatataa cttcatataa agattttata
1861 tgatcaaaaa atttcttgaa attgggtccc aaaattggat ttttgattga aaaaaaaaga
1921 ttattttaat agctttatta aaatttacaa ataaatttga atttttacat tatataatat
1981 attaacatta tgctgaaatg gtattataat tatactaaaa tcttactgta atttactcaa
2041 attttatgga aaattgctcg aaacgtagta caatttcaga aaatttttag agttgtttta
2101 gttaagtttt cggtcaaatt tttcctaaga atataaggtc attgcactaa ttagagaaca
2161 aataagaaat tgacccagtc aataagaaca aataaaaata atataattaa attgtcaagt
2221 aatattttaa tcgaatgtac attaaaatta gataaaaaaa agcaattaat ttgcaattta
2281 tcatttatgc attttgaaat cttattttaa tatatttttt taatcagtca tttatttaca
2341 attgtttagc gaaactgatg caatgatcca acattaaatc gtaatgtatg tacagaaaat
2401 caacgaattt tctcagttat tcatccttcg ctataacaat agaaggaaca aattatatta
2461 agaaagaaac ggagcttgaa aaaatgcttt cttttacaac aaagaaagtt atatcgcatt
2521 ataaaagaaa tatttaattt taaggtattc aaatttattt ttgtctctgt tttttaaata
2581 cttaacgttt gttttgaaaa aaatatttta aattataaag atttaaaaca tttttaagca
2641 acaaaagcaa taagaaatat cttgatttaa tattttaaaa taaaataatt cttttatgag
2701 tgtacacatg atttactgcc aatttcgaca acgactgtaa agtagcaacg ggtcgattga
2761 tgtgttagac cgccgtccag ttaattttag cgtattttaa ttaattttag ttaatgataa
2821 ccgtacgcac gtacgactat tttacttatt cgattccact acacactttt ccccgtgaat
2881 tttgtttcgt gtctcatttt gctgttcgtg cacgctaagt aatacgaggt gtcaaaaaaa
2941 aaaaaaaaaa
//